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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c1ut8B_

Fold library idPDB HeaderMoleculeTitle
c1ut8B_PDB header: hydrolaseChain: B: PDB Molecule: exodeoxyribonuclease;PDBTitle: divalent metal ions (zinc) bound to t5 5'-exonuclease


Added to library: Tue Mar 16 13:39:13 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RNLMIVDGTNLGFRFKHNNSKKPFASSYVSTIQSLAKSYSARTTIVLGDKGKSVFRLEHLPEYKGNRDEK
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Known secondary structure (DSSP)
TTS

TT
BS


TTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence YAQRTEEEKALDEQFFEYLKDAFELCKTTFPTFTIRGVEADDMAAYIVKLIGHLYDHVWLISTDGDWDTL
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Known secondary structure (DSSP) TS
S

TTB
TGGGSS
S
GGGGGS
 .........150.........160.........170.........180.........190.........200.........210
Sequence LTDKVSRFSFTTRREYHLRDMYEHHNVDDVEQFISLKAIMGDLGDNIRGVEGIGAKRGYNIIREFGNVLD
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Known secondary structure (DSSP)

SSTTTT
GGGSSSS
BTTTTB


TT


S
 .........220.........230.........240.........250.........260.........270..
Sequence IIDQLPLPGKQKYIQNLNASEELLFRNLILVDLPTYCVDAIAAVGQDVLDKFTKDILEIAEQ
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Known secondary structure (DSSP) TT
S
S

STT

TT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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