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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3qwuA_

Fold library idPDB HeaderMoleculeTitle
c3qwuA_PDB header: ligaseChain: A: PDB Molecule: dna ligase;PDBTitle: putative atp-dependent dna ligase from aquifex aeolicus.


Added to library: Sat Mar 19 08:46:48 2011
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ISPELVKEALKKKKVRSEEAFGLEYLRFNDDYKDIPRGTAIFKDFIIWGYPHIGRIFLLETGLREQFEAP
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Known secondary structure (DSSP)

TTSTT
S
BTTB
TT

SS







S

SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence FWVEEKVDGYNTRIFKYGDNYYALSRGGFICPFTTDRLPDLIDLRILDENPDLVICAEVAGPENPYIEES
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Known secondary structure (DSSP)
SSTT
TTS
B




TT
TT
SS
S

 .........150.........160.........170.........180.........190.........200.........210
Sequence PPYVKEDVQLFVFDFMKKNEQGFLSQEEKMELIEKYNLPHVEILGRFTASEEGIKKIKEILKRFNEEGRE
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Known secondary structure (DSSP)
TT

SS
TT

S


T

B


SSTT

 .........220.........230.........240.........250.........260.........270.........280
Sequence GVVFKEDSERNKRAKYITSYANLMDIKTNAKNMLQLPPEYYTNRILRLVLFMYEEGLKTTEHLYEELGRA
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Known secondary structure (DSSP) SSSS


TGGGGGG

TT
SSTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence FIDGLFQAIEQFEKEHKVYKTFTCKFRKKENAIALLELLSKTSKHIQVKERRLEKEGDYWRLEFDKVFLN
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Known secondary structure (DSSP) SS
S
S
SSTT
 .........360......
Sequence MTGLLGHLLSGGIVYD
Predicted secondary structure








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Known secondary structure (DSSP) TT





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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