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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3c1zA_

Fold library idPDB HeaderMoleculeTitle
c3c1zA_PDB header: dna binding proteinChain: A: PDB Molecule: dna integrity scanning protein disa;PDBTitle: structure of the ligand-free form of a bacterial dna damage2 sensor protein


Added to library: Tue Mar 16 13:36:34 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VPQELIEKIKLISPGTELRKALDDIINANFGALIFLVDDPKKYEDVIQGGFWLDTDFSAEKLYELSKMDG
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Known secondary structure (DSSP)

TSTTST

S
GGGGTTTSS

TTSSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence AIVLSEDITKIYYANVHLVPDPTIPTGETGTRHRTAERLAKQTGKVVIAVSRRRNIISLYYKNYKYVVNQ
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Known secondary structure (DSSP) TTS



TTS




SSS
SSSS
TT

 .........150.........160.........170.........180.........190.........200.........210
Sequence VDFLISKVTQAISTLEKYKDNFNKLLSELEVLELENRVTLADVVRTLAKGFELLRIVEEIRPYIVELGEE
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Known secondary structure (DSSP) TT

BTGGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence GRLARMQLRELTEDVDDLLVLLIMDYSSEEVEEETAQNILQDFITRREPSPISISRVLGYDVQQAAQLDD
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Known secondary structure (DSSP) GTTSSS


TS


TT


SSGGGGGG
 .........290.........300.........310.........320.........330.........340.........
Sequence VLVSARGYRLLKTVARIPLSIGYNVVRMFKTLDQISKASVEDLKKVEGIGEKRARAISESISSLKHRKT
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Known secondary structure (DSSP)
B



STS



STT

TSTT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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