PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: d1rrqa1

Fold library id	Fold	Superfamily	Family
d1rrqa1	DNA-glycosylase	DNA-glycosylase	Mismatch glycosylase

Links to external resources
Added to library: Tue Mar 16 12:53:32 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence P A R E F Q R D L L D W F A R E R R D L P W R K D R D P Y K V W V S E V M L Q Q T R V E T V I P Y F E Q F I D R F P T L E A L A D A D E D E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G S
T T S
S
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence V L K A W E G L G Y Y S R V R N L H A A V K E V K T R Y G G K V P D D P D E F S R L K G V G P Y T V G A V L S L A Y G V P E P A V N G N V M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S S
T T T
S T S T T
T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence R V L S R L F L V T D D I A K C S T R K R F E Q I V R E I M A Y E N P G A F N E A L I E L G A L V C T P R R P S C L L C P V Q A Y C Q A F A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
T T S T T
T T
T S
S S S
G G G
T T G G G

. . . . . . . . . 220 .

Sequence E G V A E E L P V K M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T T
S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	P	A	R	E	F	Q	R	D	L	L	D	W	F	A	R	E	R	R	D	L	P	W	R	K	D	R	D	P	Y	K	V	W	V	S	E	V	M	L	Q	Q	T	R	V	E	T	V	I	P	Y	F	E	Q	F	I	D	R	F	P	T	L	E	A	L	A	D	A	D	E	D	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																					G	G	G	S															T	T	S																S		S							S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	L	K	A	W	E	G	L	G	Y	Y	S	R	V	R	N	L	H	A	A	V	K	E	V	K	T	R	Y	G	G	K	V	P	D	D	P	D	E	F	S	R	L	K	G	V	G	P	Y	T	V	G	A	V	L	S	L	A	Y	G	V	P	E	P	A	V	N	G	N	V	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	S	S		T																		T	T					S						T	S	T	T														T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	V	L	S	R	L	F	L	V	T	D	D	I	A	K	C	S	T	R	K	R	F	E	Q	I	V	R	E	I	M	A	Y	E	N	P	G	A	F	N	E	A	L	I	E	L	G	A	L	V	C	T	P	R	R	P	S	C	L	L	C	P	V	Q	A	Y	C	Q	A	F	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T			S		T	T	S	T	T															T	T																T	S		S	S	S			G	G	G		T	T	G	G	G
	.	.	.	.	.	.	.	.	.	220	.
Sequence	E	G	V	A	E	E	L	P	V	K	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T		T	T	T		S