Fold library entry viewer: c2hivA_

Added to library: Tue Mar 16 12:16:59 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	E	F	K	V	I	A	E	Y	F	D	K	L	E	K	I	S	S	R	L	Q	L	T	A	L	L	A	D	L	L	S	K	S	D	K	T	I	I	D	K	V	V	Y	I	I	Q	G	K	L	W	P	D	F	L	G	Y	P	E	L	G	I	G	E	K	F	L	I	K	A	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B	T																													T	S		G	G	G								T	T	T		S	S		G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	I	A	T	N	T	D	E	N	S	V	E	N	L	Y	K	T	I	G	D	L	G	E	V	A	R	R	L	K	S	K	Q	K	E	S	L	T	V	D	E	V	Y	S	T	L	S	K	V	A	L	T	T	G	E	G	S	R	D	L	K	I	R	L	L	A	G	L	L	K	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T																										T						B																S	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	D	P	L	E	A	K	F	L	V	R	F	V	E	G	R	L	R	V	G	I	G	D	A	T	V	L	D	A	M	A	I	A	F	G	G	G	Q	S	A	S	E	I	I	E	R	A	Y	N	L	R	A	D	L	G	N	I	A	K	I	I	V	E	K	G	I	E	A	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S														T																				S	S	S	G	G	G											S															G	G	G	G	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	T	L	K	P	Q	V	G	I	P	I	R	P	M	L	A	E	R	L	S	N	P	E	E	I	L	K	K	M	G	G	N	A	I	V	D	Y	K	Y	D	G	E	R	A	Q	I	H	K	K	E	D	K	I	F	I	F	S	R	R	L	E	N	I	T	S	Q	Y	P	D	V	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T					T	T	S											S									T	T	T									S	S									T	T							T	T			B		G	G	G
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	D	Y	V	S	K	Y	I	E	G	K	E	F	I	I	E	G	E	I	V	A	I	D	P	E	S	G	E	M	R	P	F	Q	E	L	M	H	R	K	R	K	S	D	I	Y	E	A	I	K	E	Y	P	V	N	V	F	L	F	D	L	M	Y	Y	E	D	V	D	Y	T	T	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							B			S	S										B		T	T	T			B			T										S									S													T	T				T	T	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	P	L	E	A	R	R	K	L	L	E	S	I	V	K	P	N	D	Y	V	K	I	A	H	H	I	Q	A	N	N	V	E	D	L	K	S	F	F	Y	R	A	I	S	E	G	G	E	G	V	M	V	K	A	I	G	K	D	A	I	Y	Q	A	G	A	R	G	W	L	W	I	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													B				S	S										S	S														T	T										S	T	T					T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	L	K	R	D	Y	Q	S	E	M	A	D	T	V	D	L	V	V	V	G	G	F	Y	G	K	G	K	R	G	G	K	I	S	S	L	L	M	A	A	Y	N	P	K	T	D	S	F	E	S	V	C	K	V	A	S	G	F	S	D	E	Q	L	D	E	L	Q	K	K	L	M	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T		T	T	S	S															S	G	G	G	T	T	S											T	T	T	T										B	S															T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	I	K	R	D	V	K	H	P	R	V	N	S	K	M	E	P	D	I	W	V	E	P	V	Y	V	A	E	I	I	G	S	E	I	T	I	S	P	L	H	T	C	C	Q	D	V	V	E	K	D	A	G	L	S	I	R	F	P	R	F	I	R	W	R	D	D	K	S	P	E	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T			S	S			T	T				S	S			S					S									S						T	T			T	T	T	T	T	S	S	T	T							S								T	T			G	G	G
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.
Sequence	A	T	T	T	D	E	I	L	E	M	Y	N	K	Q	P	K	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		B											S

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PDB structure

FASTA sequence

Hidden Markov model

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