Phyre Home Retrieve Phyre Job Id
Emaill.a.kelley@imperial.ac.uk
DescriptionP77215
DateThu Jan 5 12:26:27 GMT 2012
Unique Job ID3ca030754a3a0558

Summary 

Top model
Image coloured by rainbow N → C terminus
Model (left) based on template c3cxoA_
Top template information
PDB header:lyase
Chain: A: PDB Molecule:putative galactonate dehydratase;
PDBTitle: crystal structure of l-rhamnonate dehydratase from2 salmonella typhimurium complexed with mg and 3-deoxy-l-3 rhamnonate
Confidence and coverage
Confidence:100.0% Coverage:100%
401 residues (100% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in Jmol

Sequence analysis 

Secondary structure and disorder prediction 

   1........10.........20.........30.........40.........50.........60
Sequence  MTLPKIKQVRAWFTGGATAEKGAGGGDYHDQGANHWIDDHIATPMSKYRDYEQSRQSFGI
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Disorder  ???????






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   .........70.........80.........90.........100.........110.........120
Sequence  NVLGTLVVEVEAENGQTGFAVSTAGEMGCFIVEKHLNRFIEGKCVSDIKLIHDQMLSATL
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   .........130.........140.........150.........160.........170.........180
Sequence  YYSGSGGLVMNTISCVDLALWDLFGKVVGLPVYKLLGGAVRDEIQFYATGARPDLAKEMG
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   .........190.........200.........210.........220.........230.........240
Sequence  FIGGKMPTHWGPHDGDAGIRKDAAMVADMREKCGEDFWLMLDCWMSQDVNYATKLAHACA
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   .........250.........260.........270.........280.........290.........300
Sequence  PYNLKWIEECLPPQQYESYRELKRNAPVGMMVTSGEHHGTLQSFRTLSETGIDIMQPDVG
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   .........310.........320.........330.........340.........350.........360
Sequence  WCGGLTTLVEIAAIAKSRGQLVVPHGSSVYSHHAVITFTNTPFSEFLMTSPDCSTMRPQF
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   .........370.........380.........390.........400.
Sequence  DPILLNEPVPVNGRIHKSVLDKPGFGVELNRDCNLKRPYSH
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????
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Confidence Key
High(9)                    Low (0)
?Disordered
Alpha helix
Beta strand

Domain analysis 

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

RankAligned region

PDB 3cxo chain A

3D model

Region: 1 - 401
Aligned: 401
Modelled: 401
Confidence: 100.0%
Identity: 96%
PDB header:lyase
Chain: A: PDB Molecule:putative galactonate dehydratase;
PDBTitle: crystal structure of l-rhamnonate dehydratase from2 salmonella typhimurium complexed with mg and 3-deoxy-l-3 rhamnonate

Phyre2

PDB 2oz3 chain F

3D model

Region: 1 - 401
Aligned: 384
Modelled: 385
Confidence: 100.0%
Identity: 62%
PDB header:lyase
Chain: F: PDB Molecule:mandelate racemase/muconate lactonizing enzyme;
PDBTitle: crystal structure of l-rhamnonate dehydratase from azotobacter2 vinelandii

Phyre2

PDB 2p0i chain A

3D model

Region: 3 - 400
Aligned: 377
Modelled: 379
Confidence: 100.0%
Identity: 43%
PDB header:lyase
Chain: A: PDB Molecule:l-rhamnonate dehydratase;
PDBTitle: crystal structure of l-rhamnonate dehydratase from gibberella zeae

Phyre2

PDB 2o56 chain D

3D model

Region: 3 - 400
Aligned: 351
Modelled: 355
Confidence: 100.0%
Identity: 25%
PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:putative mandelate racemase;
PDBTitle: crystal structure of a member of the enolase superfamily from2 salmonella typhimurium

Phyre2

PDB 2hxt chain A

3D model

Region: 5 - 399
Aligned: 365
Modelled: 368
Confidence: 100.0%
Identity: 18%
PDB header:unknown function
Chain: A: PDB Molecule:l-fuconate dehydratase;
PDBTitle: crystal structure of l-fuconate dehydratase from xanthomonas2 campestris liganded with mg++ and d-erythronohydroxamate

Phyre2

PDB 2pp1 chain C

3D model

Region: 2 - 397
Aligned: 355
Modelled: 368
Confidence: 100.0%
Identity: 24%
PDB header:lyase
Chain: C: PDB Molecule:l-talarate/galactarate dehydratase;
PDBTitle: crystal structure of l-talarate/galactarate dehydratase from2 salmonella typhimurium lt2 liganded with mg and l-lyxarohydroxamate

Phyre2

PDB 2ox4 chain E

3D model

Region: 5 - 399
Aligned: 350
Modelled: 354
Confidence: 100.0%
Identity: 25%
PDB header:isomerase
Chain: E: PDB Molecule:putative mandelate racemase;
PDBTitle: crystal structure of putative dehydratase from zymomonas mobilis zm4

Phyre2

PDB 2nql chain B

3D model

Region: 3 - 397
Aligned: 376
Modelled: 383
Confidence: 100.0%
Identity: 19%
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:isomerase/lactonizing enzyme;
PDBTitle: crystal structure of a member of the enolase superfamily from2 agrobacterium tumefaciens

Phyre2

PDB 3t6c chain B

3D model

Region: 5 - 401
Aligned: 345
Modelled: 353
Confidence: 100.0%
Identity: 25%
PDB header:lyase
Chain: B: PDB Molecule:putative mand family dehydratase;
PDBTitle: crystal structure of an enolase from pantoea ananatis (efi target efi-2 501676) with bound d-gluconate and mg

Phyre2

PDB 3thu chain C

3D model

Region: 3 - 401
Aligned: 346
Modelled: 352
Confidence: 100.0%
Identity: 24%
PDB header:lyase
Chain: C: PDB Molecule:mandelate racemase / muconate lactonizing enzyme family
PDBTitle: crystal structure of an enolase from sphingomonas sp. ska58 (efi2 target efi-501683) with bound mg

Phyre2

PDB 3tji chain A

3D model

Region: 1 - 401
Aligned: 349
Modelled: 357
Confidence: 100.0%
Identity: 25%
PDB header:lyase
Chain: A: PDB Molecule:mandelate racemase/muconate lactonizing enzyme, n-terminal
PDBTitle: crystal structure of an enolase from enterobacter sp. 638 (efi target2 efi-501662) with bound mg

Phyre2

PDB 3h12 chain B

3D model

Region: 5 - 401
Aligned: 364
Modelled: 373
Confidence: 100.0%
Identity: 23%
PDB header:isomerase
Chain: B: PDB Molecule:mandelate racemase;
PDBTitle: crystal structure of putative mandelate racemase from bordetella2 bronchiseptica rb50

Phyre2

PDB 2oo6 chain A

3D model

Region: 5 - 400
Aligned: 342
Modelled: 352
Confidence: 100.0%
Identity: 22%
PDB header:isomerase
Chain: A: PDB Molecule:putative l-alanine-dl-glutamate epimerase;
PDBTitle: crystal structure of putative l-alanine-dl-glutamate epimerase from2 burkholderia xenovorans strain lb400

Phyre2

PDB 3rcy chain C

3D model

Region: 5 - 400
Aligned: 349
Modelled: 357
Confidence: 100.0%
Identity: 25%
PDB header:isomerase
Chain: C: PDB Molecule:mandelate racemase/muconate lactonizing enzyme-like
PDBTitle: crystal structure of mandelate racemase/muconate lactonizing enzyme-2 like protein from roseovarius sp. tm1035

Phyre2

PDB 3n6j chain A

3D model

Region: 1 - 397
Aligned: 358
Modelled: 371
Confidence: 100.0%
Identity: 21%
PDB header:isomerase
Chain: A: PDB Molecule:mandelate racemase/muconate lactonizing protein;
PDBTitle: crystal structure of mandelate racemase/muconate lactonizing protein2 from actinobacillus succinogenes 130z

Phyre2

PDB 2gl5 chain A

3D model

Region: 5 - 398
Aligned: 353
Modelled: 357
Confidence: 100.0%
Identity: 25%
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative dehydratase protein;
PDBTitle: crystal structure of putative dehydratase from salmonella thyphimurium

Phyre2

PDB 2qgy chain A

3D model

Region: 1 - 397
Aligned: 354
Modelled: 374
Confidence: 100.0%
Identity: 21%
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:enolase from the environmental genome shotgun
PDBTitle: crystal structure of an enolase from the environmental2 genome shotgun sequencing of the sargasso sea

Phyre2

PDB 3sqs chain A

3D model

Region: 1 - 400
Aligned: 373
Modelled: 374
Confidence: 100.0%
Identity: 26%
PDB header:isomerase
Chain: A: PDB Molecule:mandelate racemase/muconate lactonizing protein;
PDBTitle: crystal structure of a putative mandelate racemase/muconate2 lactonizing protein from dinoroseobacter shibae dfl 12

Phyre2

PDB 1rvk chain A

3D model

Region: 6 - 397
Aligned: 358
Modelled: 373
Confidence: 100.0%
Identity: 25%
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:isomerase/lactonizing enzyme;
PDBTitle: crystal structure of enolase agr_l_2751 from agrobacterium tumefaciens

Phyre2

PDB 2qjj chain C

3D model

Region: 64 - 401
Aligned: 330
Modelled: 338
Confidence: 100.0%
Identity: 23%
PDB header:lyase
Chain: C: PDB Molecule:mandelate racemase/muconate lactonizing enzyme;
PDBTitle: crystal structure of d-mannonate dehydratase from novosphingobium2 aromaticivorans

Phyre2
1

c3cxoA_
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c2oz3F_
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c2p0iA_
4

c2o56D_
5

c2hxtA_
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c2pp1C_
7

c2ox4E_
8

c2nqlB_
9

c3t6cB_
10

c3thuC_
11

c3tjiA_
12

c3h12B_
13

c2oo6A_
14

c3rcyC_
15

c3n6jA_
16

c2gl5A_
17

c2qgyA_
18

c3sqsA_
19

c1rvkA_
20

c2qjjC_
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Detailed template information 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3cxoA_



100.0 96 PDB header:lyase
Chain: A: PDB Molecule:putative galactonate dehydratase;
PDBTitle: crystal structure of l-rhamnonate dehydratase from2 salmonella typhimurium complexed with mg and 3-deoxy-l-3 rhamnonate
2c2oz3F_



100.0 62 PDB header:lyase
Chain: F: PDB Molecule:mandelate racemase/muconate lactonizing enzyme;
PDBTitle: crystal structure of l-rhamnonate dehydratase from azotobacter2 vinelandii
3c2p0iA_



100.0 43 PDB header:lyase
Chain: A: PDB Molecule:l-rhamnonate dehydratase;
PDBTitle: crystal structure of l-rhamnonate dehydratase from gibberella zeae
4c2o56D_



100.0 25 PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:putative mandelate racemase;
PDBTitle: crystal structure of a member of the enolase superfamily from2 salmonella typhimurium
5c2hxtA_



100.0 18 PDB header:unknown function
Chain: A: PDB Molecule:l-fuconate dehydratase;
PDBTitle: crystal structure of l-fuconate dehydratase from xanthomonas2 campestris liganded with mg++ and d-erythronohydroxamate
6c2pp1C_



100.0 24 PDB header:lyase
Chain: C: PDB Molecule:l-talarate/galactarate dehydratase;
PDBTitle: crystal structure of l-talarate/galactarate dehydratase from2 salmonella typhimurium lt2 liganded with mg and l-lyxarohydroxamate
7c2ox4E_



100.0 25 PDB header:isomerase
Chain: E: PDB Molecule:putative mandelate racemase;
PDBTitle: crystal structure of putative dehydratase from zymomonas mobilis zm4
8c2nqlB_



100.0 19 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:isomerase/lactonizing enzyme;
PDBTitle: crystal structure of a member of the enolase superfamily from2 agrobacterium tumefaciens
9c3t6cB_



100.0 25 PDB header:lyase
Chain: B: PDB Molecule:putative mand family dehydratase;
PDBTitle: crystal structure of an enolase from pantoea ananatis (efi target efi-2 501676) with bound d-gluconate and mg
10c3thuC_



100.0 24 PDB header:lyase
Chain: C: PDB Molecule:mandelate racemase / muconate lactonizing enzyme family
PDBTitle: crystal structure of an enolase from sphingomonas sp. ska58 (efi2 target efi-501683) with bound mg
11c3tjiA_



100.0 25 PDB header:lyase
Chain: A: PDB Molecule:mandelate racemase/muconate lactonizing enzyme, n-terminal
PDBTitle: crystal structure of an enolase from enterobacter sp. 638 (efi target2 efi-501662) with bound mg
12c3h12B_



100.0 23 PDB header:isomerase
Chain: B: PDB Molecule:mandelate racemase;
PDBTitle: crystal structure of putative mandelate racemase from bordetella2 bronchiseptica rb50
13c2oo6A_



100.0 22 PDB header:isomerase
Chain: A: PDB Molecule:putative l-alanine-dl-glutamate epimerase;
PDBTitle: crystal structure of putative l-alanine-dl-glutamate epimerase from2 burkholderia xenovorans strain lb400
14c3rcyC_



100.0 25 PDB header:isomerase
Chain: C: PDB Molecule:mandelate racemase/muconate lactonizing enzyme-like
PDBTitle: crystal structure of mandelate racemase/muconate lactonizing enzyme-2 like protein from roseovarius sp. tm1035
15c3n6jA_



100.0 21 PDB header:isomerase
Chain: A: PDB Molecule:mandelate racemase/muconate lactonizing protein;
PDBTitle: crystal structure of mandelate racemase/muconate lactonizing protein2 from actinobacillus succinogenes 130z
16c2gl5A_



100.0 25 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative dehydratase protein;
PDBTitle: crystal structure of putative dehydratase from salmonella thyphimurium
17c2qgyA_



100.0 21 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:enolase from the environmental genome shotgun
PDBTitle: crystal structure of an enolase from the environmental2 genome shotgun sequencing of the sargasso sea
18c3sqsA_



100.0 26 PDB header:isomerase
Chain: A: PDB Molecule:mandelate racemase/muconate lactonizing protein;
PDBTitle: crystal structure of a putative mandelate racemase/muconate2 lactonizing protein from dinoroseobacter shibae dfl 12
19c1rvkA_



100.0 25 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:isomerase/lactonizing enzyme;
PDBTitle: crystal structure of enolase agr_l_2751 from agrobacterium tumefaciens
20c2qjjC_



100.0 23 PDB header:lyase
Chain: C: PDB Molecule:mandelate racemase/muconate lactonizing enzyme;
PDBTitle: crystal structure of d-mannonate dehydratase from novosphingobium2 aromaticivorans
21c3n4eA_



not modelled 100.0 28 PDB header:isomerase
Chain: A: PDB Molecule:mandelate racemase/muconate lactonizing enzyme, c-terminal
PDBTitle: crystal structure of mandelate racemase/muconate lactonizing protein2 from paracoccus denitrificans pd1222
22c2pozA_



not modelled 100.0 24 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative dehydratase;
PDBTitle: crystal structure of a putative dehydratase from mesorhizobium loti
23c2qq6B_



not modelled 100.0 27 PDB header:isomerase
Chain: B: PDB Molecule:mandelate racemase/muconate lactonizing enzyme-
PDBTitle: crystal structure of mandelate racemase/muconate2 lactonizing enzyme-like protein from rubrobacter3 xylanophilus dsm 9941
24c3dipA_



not modelled 100.0 23 PDB header:lyase
Chain: A: PDB Molecule:enolase;
PDBTitle: crystal structure of an enolase protein from the2 environmental genome shotgun sequencing of the sargasso sea
25c3nxlD_



not modelled 100.0 19 PDB header:lyase
Chain: D: PDB Molecule:glucarate dehydratase;
PDBTitle: crystal structure of glucarate dehydratase from burkholderia cepacia2 complexed with magnesium
26c1ec8B_



not modelled 100.0 20 PDB header:lyase
Chain: B: PDB Molecule:glucarate dehydratase;
PDBTitle: e. coli glucarate dehydratase bound to product 2,3-2 dihydroxy-5-oxo-hexanedioate
27c3rr1B_



not modelled 100.0 26 PDB header:lyase
Chain: B: PDB Molecule:putative d-galactonate dehydratase;
PDBTitle: crystal structure of enolase prk14017 (target efi-500653) from2 ralstonia pickettii 12j
28c2qdeA_



not modelled 100.0 24 PDB header:lyase
Chain: A: PDB Molecule:mandelate racemase/muconate lactonizing enzyme family
PDBTitle: crystal structure of mandelate racemase/muconate lactonizing family2 protein from azoarcus sp. ebn1
29c3mkcA_



not modelled 100.0 23 PDB header:isomerase
Chain: A: PDB Molecule:racemase;
PDBTitle: crystal structure of a putative racemase
30c2pgwC_



not modelled 100.0 21 PDB header:isomerase
Chain: C: PDB Molecule:muconate cycloisomerase;
PDBTitle: crystal structure of a putative muconate cycloisomerase from2 sinorhizobium meliloti 1021
31c3bjsB_



not modelled 100.0 22 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:mandelate racemase/muconate lactonizing enzyme;
PDBTitle: crystal structure of a member of enolase superfamily from polaromonas2 sp. js666
32c3bsmD_



not modelled 100.0 21 PDB header:lyase
Chain: D: PDB Molecule:mandelate racemase/muconate lactonizing enzyme;
PDBTitle: crystal structure of d-mannonate dehydratase from2 chromohalobacter salexigens
33c2podA_



not modelled 100.0 24 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:mandelate racemase / muconate lactonizing enzyme;
PDBTitle: crystal structure of a member of enolase superfamily from burkholderia2 pseudomallei k96243
34c3t8qA_



not modelled 100.0 22 PDB header:isomerase
Chain: A: PDB Molecule:mandelate racemase/muconate lactonizing enzyme family
PDBTitle: crystal structure of mandelate racemase/muconate lactonizing enzyme2 family protein from hoeflea phototrophica
35c2chrA_



not modelled 100.0 18 PDB header:isomerase
Chain: A: PDB Molecule:chloromuconate cycloisomerase;
PDBTitle: a re-evaluation of the crystal structure of chloromuconate2 cycloisomerase
36c3sjnB_



not modelled 100.0 25 PDB header:lyase
Chain: B: PDB Molecule:mandelate racemase/muconate lactonizing protein;
PDBTitle: crystal structure of enolase spea_3858 (target efi-500646) from2 shewanella pealeana with magnesium bound
37c3ddmD_



not modelled 100.0 22 PDB header:lyase
Chain: D: PDB Molecule:putative mandelate racemase/muconate lactonizing
PDBTitle: crystal structure of mandelate racemase/muconate2 lactonizing enzyme from bordetella bronchiseptica rb50
38c3dfhC_



not modelled 100.0 23 PDB header:isomerase
Chain: C: PDB Molecule:mandelate racemase;
PDBTitle: crystal structure of putative mandelate racemase / muconate2 lactonizing enzyme from vibrionales bacterium swat-3
39c3mznA_



not modelled 100.0 19 PDB header:lyase
Chain: A: PDB Molecule:glucarate dehydratase;
PDBTitle: crystal structure of probable glucarate dehydratase from2 chromohalobacter salexigens dsm 3043
40c3cb3B_



not modelled 100.0 26 PDB header:isomerase
Chain: B: PDB Molecule:mandelate racemase/muconate lactonizing enzyme;
PDBTitle: crystal structure of l-talarate dehydratase from polaromonas sp. js6662 complexed with mg and l-glucarate
41c2hzgB_



not modelled 100.0 21 PDB header:isomerase
Chain: B: PDB Molecule:mandelate racemase/muconate lactonizing enzyme/enolase
PDBTitle: crystal stucture of predicted mandelate racemase from rhodobacter2 sphaeroides
42c3cyjA_



not modelled 100.0 24 PDB header:isomerase
Chain: A: PDB Molecule:mandelate racemase/muconate lactonizing enzyme-like
PDBTitle: crystal structure of a mandelate racemase/muconate lactonizing enzyme-2 like protein from rubrobacter xylanophilus
43c1nu5A_



not modelled 100.0 18 PDB header:isomerase
Chain: A: PDB Molecule:chloromuconate cycloisomerase;
PDBTitle: crystal structure of pseudomonas sp. p51 chloromuconate lactonizing2 enzyme
44c3dg7B_



not modelled 100.0 19 PDB header:isomerase
Chain: B: PDB Molecule:muconate cycloisomerase;
PDBTitle: crystal structure of muconate lactonizing enzyme from mucobacterium2 smegmatis complexed with muconolactone
45c3my9A_



not modelled 100.0 20 PDB header:isomerase
Chain: A: PDB Molecule:muconate cycloisomerase;
PDBTitle: crystal structure of a muconate cycloisomerase from azorhizobium2 caulinodans
46c3es8D_



not modelled 100.0 17 PDB header:isomerase, lyase
Chain: D: PDB Molecule:muconate cycloisomerase;
PDBTitle: crystal structure of divergent enolase from oceanobacillus2 iheyensis complexed with mg and l-malate.
47c3i6eA_



not modelled 100.0 20 PDB header:isomerase
Chain: A: PDB Molecule:muconate cycloisomerase i;
PDBTitle: crystal structure of muconate lactonizing enzyme from2 ruegeria pomeroyi.
48c3mqtV_



not modelled 100.0 27 PDB header:isomerase
Chain: V: PDB Molecule:
PDBTitle: crystal structure of a mandelate racemase/muconate lactonizing enzyme2 from shewanella pealeana
49c3tj4B_



not modelled 100.0 20 PDB header:lyase
Chain: B: PDB Molecule:mandelate racemase;
PDBTitle: crystal structure of an enolase from agrobacterium tumefaciens (efi2 target efi-502087) no mg
50c3t9pB_



not modelled 100.0 21 PDB header:isomerase
Chain: B: PDB Molecule:mandelate racemase/muconate lactonizing enzyme family
PDBTitle: crystal structure of a putative mandelate racemase/muconate2 lactonizing enzyme family protein from roseovarius
51c2oqhD_



not modelled 100.0 22 PDB header:isomerase
Chain: D: PDB Molecule:putative isomerase;
PDBTitle: crystal structure of an isomerase from streptomyces coelicolor a3(2)
52c1f9cA_



not modelled 100.0 18 PDB header:isomerase
Chain: A: PDB Molecule:protein (muconate cycloisomerase i);
PDBTitle: crystal structure of mle d178n variant
53c2ppgB_



not modelled 100.0 22 PDB header:isomerase
Chain: B: PDB Molecule:putative isomerase;
PDBTitle: crystal structure of putative isomerase from sinorhizobium meliloti
54c3ugvE_



not modelled 100.0 20 PDB header:lyase
Chain: E: PDB Molecule:enolase;
PDBTitle: crystal structure of an enolase from alpha pretobacterium bal199 (efi2 target efi-501650) with bound mg
55c3fv9D_



not modelled 100.0 19 PDB header:hydrolase
Chain: D: PDB Molecule:mandelate racemase/muconate lactonizing enzyme;
PDBTitle: crystal structure of putative mandelate racemase/muconatelactonizing2 enzyme from roseovarius nubinhibens ism complexed with magnesium
56c2gdqB_



not modelled 100.0 21 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:yitf;
PDBTitle: crystal structure of mandelate racemase/muconate lactonizing enzyme2 from bacillus subtilis at 1.8 a resolution
57c3toyC_



not modelled 100.0 23 PDB header:lyase
Chain: C: PDB Molecule:mandelate racemase/muconate lactonizing enzyme family
PDBTitle: crystal structure of enolase brado_4202 (target efi-501651) from2 bradyrhizobium sp. ors278 with calcium and acetate bound
58c3fcpF_



not modelled 100.0 19 PDB header:isomerase
Chain: F: PDB Molecule:l-ala-d/l-glu epimerase, a muconate lactonizing
PDBTitle: crystal structure of muconate lactonizing enzyme from2 klebsiella pneumoniae
59c2rdxG_



not modelled 100.0 21 PDB header:structural genomics, unknown function
Chain: G: PDB Molecule:mandelate racemase/muconate lactonizing enzyme, putative;
PDBTitle: crystal structure of mandelate racemase/muconate lactonizing enzyme2 from roseovarius nubinhibens ism
60c2ovlA_



not modelled 100.0 26 PDB header:isomerase
Chain: A: PDB Molecule:putative racemase;
PDBTitle: crystal structure of a racemase from streptomyces2 coelicolor a3(2)
61c2ps2A_



not modelled 100.0 18 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative mandelate racemase/muconate lactonizing
PDBTitle: crystal structure of putative mandelate racemase/muconate2 lactonizing enzyme from aspergillus oryzae
62c2p88E_



not modelled 100.0 18 PDB header:lyase
Chain: E: PDB Molecule:mandelate racemase/muconate lactonizing enzyme
PDBTitle: crystal structure of n-succinyl arg/lys racemase from2 bacillus cereus atcc 14579
63c3px5A_



not modelled 100.0 18 PDB header:metal binding protein
Chain: A: PDB Molecule:enzyme of enolase superfamily;
PDBTitle: structure of efi enolase target en500555, a putative dipeptide2 epimerase: apo structure
64c3msyC_



not modelled 100.0 23 PDB header:isomerase
Chain: C: PDB Molecule:mandelate racemase/muconate lactonizing enzyme;
PDBTitle: crystal structure of mandelate racemase/muconate lactonizing enzyme2 from a marine actinobacterium
65c1mraA_



not modelled 100.0 20 PDB header:racemase
Chain: A: PDB Molecule:mandelate racemase;
PDBTitle: mandelate racemase mutant d270n co-crystallized with (s)-atrolactate
66c3q45E_



not modelled 100.0 20 PDB header:isomerase
Chain: E: PDB Molecule:mandelate racemase/muconate lactonizing enzyme family;
PDBTitle: crystal structure of dipeptide epimerase from cytophaga hutchinsonii2 complexed with mg and dipeptide d-ala-l-val
67c3i4kA_



not modelled 100.0 22 PDB header:isomerase
Chain: A: PDB Molecule:muconate lactonizing enzyme;
PDBTitle: crystal structure of muconate lactonizing enzyme from2 corynebacterium glutamicum
68c2pmqA_



not modelled 100.0 20 PDB header:isomerase
Chain: A: PDB Molecule:mandelate racemase/muconate lactonizing enzyme;
PDBTitle: crystal structure of a mandelate racemase/muconate lactonizing enzyme2 from roseovarius sp. htcc2601
69c3eezA_



not modelled 100.0 17 PDB header:isomerase
Chain: A: PDB Molecule:putative mandelate racemase/muconate lactonizing
PDBTitle: crystal structure of a putative mandelate racemase/muconate2 lactonizing enzyme from silicibacter pomeroyi
70c2qddA_



not modelled 100.0 16 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:mandelate racemase/muconate lactonizing enzyme;
PDBTitle: crystal structure of a member of enolase superfamily from roseovarius2 nubinhibens ism
71c2dw7G_



not modelled 100.0 20 PDB header:lyase
Chain: G: PDB Molecule:bll6730 protein;
PDBTitle: crystal structure of d-tartrate dehydratase from2 bradyrhizobium japonicum complexed with mg++ and meso-3 tartrate
72c1sjaA_



not modelled 100.0 15 PDB header:lyase, isomerase
Chain: A: PDB Molecule:n-acylamino acid racemase;
PDBTitle: x-ray structure of o-succinylbenzoate synthase complexed2 with n-acetylmethionine
73c2oz8B_



not modelled 100.0 19 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:mll7089 protein;
PDBTitle: crystal structure of putative mandelate racemase from mesorhizobium2 loti
74c1wueA_



not modelled 100.0 16 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:mandelate racemase/muconate lactonizing enzyme family
PDBTitle: crystal structure of protein gi:29375081, unknown member of enolase2 superfamily from enterococcus faecalis v583
75c2fkpC_



not modelled 100.0 19 PDB header:isomerase
Chain: C: PDB Molecule:n-acylamino acid racemase;
PDBTitle: the mutant g127c-t313c of deinococcus radiodurans n-2 acylamino acid racemase
76c2zc8B_



not modelled 100.0 15 PDB header:metal binding protein
Chain: B: PDB Molecule:n-acylamino acid racemase;
PDBTitle: crystal structure of n-acylamino acid racemase from thermus2 thermophilus hb8
77c3n4fD_



not modelled 100.0 21 PDB header:isomerase
Chain: D: PDB Molecule:mandelate racemase/muconate lactonizing protein;
PDBTitle: crystal structure of mandelate racemase/muconate lactonizing protein2 from geobacillus sp. y412mc10
78c3jw7E_



not modelled 100.0 21 PDB header:isomerase
Chain: E: PDB Molecule:dipeptide epimerase;
PDBTitle: crystal structure of dipeptide epimerase from enterococcus faecalis2 v583 complexed with mg and dipeptide l-ile-l-tyr
79c1jpmB_



not modelled 100.0 16 PDB header:isomerase
Chain: B: PDB Molecule:l-ala-d/l-glu epimerase;
PDBTitle: l-ala-d/l-glu epimerase
80c3mwcA_



not modelled 100.0 16 PDB header:ligase
Chain: A: PDB Molecule:mandelate racemase/muconate lactonizing protein;
PDBTitle: crystal structure of probable o-succinylbenzoic acid synthetase from2 kosmotoga olearia
81c3ritE_



not modelled 100.0 17 PDB header:isomerase
Chain: E: PDB Molecule:dipeptide epimerase;
PDBTitle: crystal structure of dipeptide epimerase from methylococcus capsulatus2 complexed with mg and dipeptide l-arg-d-lys
82c3ik4A_



not modelled 100.0 18 PDB header:isomerase
Chain: A: PDB Molecule:mandelate racemase/muconate lactonizing protein;
PDBTitle: crystal structure of mandelate racemase/muconate lactonizing protein2 from herpetosiphon aurantiacus
83c1wufB_



not modelled 100.0 16 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:hypothetical protein lin2664;
PDBTitle: crystal structure of protein gi:16801725, member of enolase2 superfamily from listeria innocua clip11262
84c3qldB_



not modelled 100.0 16 PDB header:isomerase
Chain: B: PDB Molecule:mandelate racemase/muconate lactonizing protein;
PDBTitle: structure of probable mandelate racemase (aalaa1draft_2112) from2 alicyclobacillus acidocaldarius
85c3dfyJ_



not modelled 100.0 17 PDB header:isomerase
Chain: J: PDB Molecule:muconate cycloisomerase;
PDBTitle: crystal structure of apo dipeptide epimerase from2 thermotoga maritima
86c3ijlA_



not modelled 100.0 19 PDB header:isomerase
Chain: A: PDB Molecule:muconate cycloisomerase;
PDBTitle: structure of dipeptide epimerase from bacteroides thetaiotaomicron2 complexed with l-pro-d-glu; nonproductive substrate binding.
87c2pgeA_



not modelled 100.0 14 PDB header:lyase
Chain: A: PDB Molecule:menc;
PDBTitle: crystal structure of menc from desulfotalea psychrophila2 lsv54
88c2oktA_



not modelled 100.0 15 PDB header:lyase
Chain: A: PDB Molecule:o-succinylbenzoic acid synthetase;
PDBTitle: crystal structure of o-succinylbenzoic acid synthetase from2 staphylococcus aureus, ligand-free form
89c1jpdX_



not modelled 100.0 15 PDB header:isomerase
Chain: X: PDB Molecule:l-ala-d/l-glu epimerase;
PDBTitle: l-ala-d/l-glu epimerase
90d2gl5a1



not modelled 100.0 23 Fold:TIM beta/alpha-barrel
Superfamily:Enolase C-terminal domain-like
Family:D-glucarate dehydratase-like
91c1kkoB_



not modelled 100.0 14 PDB header:lyase
Chain: B: PDB Molecule:3-methylaspartate ammonia-lyase;
PDBTitle: crystal structure of citrobacter amalonaticus2 methylaspartate ammonia lyase
92c1kczA_



not modelled 100.0 16 PDB header:lyase
Chain: A: PDB Molecule:beta-methylaspartase;
PDBTitle: crystal structure of beta-methylaspartase from clostridium2 tetanomorphum. mg-complex.
93d1rvka1



not modelled 100.0 23 Fold:TIM beta/alpha-barrel
Superfamily:Enolase C-terminal domain-like
Family:D-glucarate dehydratase-like
94d1yeya1



not modelled 100.0 18 Fold:TIM beta/alpha-barrel
Superfamily:Enolase C-terminal domain-like
Family:D-glucarate dehydratase-like
95d2chra1



not modelled 100.0 15 Fold:TIM beta/alpha-barrel
Superfamily:Enolase C-terminal domain-like
Family:D-glucarate dehydratase-like
96d2gdqa1



not modelled 100.0 20 Fold:TIM beta/alpha-barrel
Superfamily:Enolase C-terminal domain-like
Family:D-glucarate dehydratase-like
97d1muca1



not modelled 100.0 14 Fold:TIM beta/alpha-barrel
Superfamily:Enolase C-terminal domain-like
Family:D-glucarate dehydratase-like
98c3cawB_



not modelled 100.0 13 PDB header:oxidoreductase
Chain: B: PDB Molecule:o-succinylbenzoate synthase;
PDBTitle: crystal structure of o-succinylbenzoate synthase from2 bdellovibrio bacteriovorus liganded with mg
99d1nu5a1



not modelled 100.0 15 Fold:TIM beta/alpha-barrel
Superfamily:Enolase C-terminal domain-like
Family:D-glucarate dehydratase-like
100d1tzza1



not modelled 100.0 20 Fold:TIM beta/alpha-barrel
Superfamily:Enolase C-terminal domain-like
Family:D-glucarate dehydratase-like
101c3qn3B_



not modelled 100.0 18 PDB header:lyase
Chain: B: PDB Molecule:enolase;
PDBTitle: phosphopyruvate hydratase from campylobacter jejuni.
102d1sjda1



not modelled 100.0 16 Fold:TIM beta/alpha-barrel
Superfamily:Enolase C-terminal domain-like
Family:D-glucarate dehydratase-like
103c2pa6A_



not modelled 100.0 20 PDB header:lyase
Chain: A: PDB Molecule:enolase;
PDBTitle: crystal structure of mj0232 from methanococcus jannaschii
104c3uj2C_



not modelled 100.0 18 PDB header:lyase
Chain: C: PDB Molecule:enolase 1;
PDBTitle: crystal structure of an enolase from anaerostipes caccae (efi target2 efi-502054) with bound mg and sulfate
105d1wufa1



not modelled 100.0 15 Fold:TIM beta/alpha-barrel
Superfamily:Enolase C-terminal domain-like
Family:D-glucarate dehydratase-like
106d1wuea1



not modelled 100.0 16 Fold:TIM beta/alpha-barrel
Superfamily:Enolase C-terminal domain-like
Family:D-glucarate dehydratase-like
107d1r0ma1



not modelled 100.0 18 Fold:TIM beta/alpha-barrel
Superfamily:Enolase C-terminal domain-like
Family:D-glucarate dehydratase-like
108c3tqpA_



not modelled 100.0 19 PDB header:lyase
Chain: A: PDB Molecule:enolase;
PDBTitle: structure of an enolase (eno) from coxiella burnetii
109d2mnra1



not modelled 100.0 20 Fold:TIM beta/alpha-barrel
Superfamily:Enolase C-terminal domain-like
Family:D-glucarate dehydratase-like
110c1l8pC_



not modelled 100.0 18 PDB header:lyase
Chain: C: PDB Molecule:enolase 1;
PDBTitle: mg-phosphonoacetohydroxamate complex of s39a yeast enolase 1
111c2oztA_



not modelled 100.0 14 PDB header:lyase
Chain: A: PDB Molecule:tlr1174 protein;
PDBTitle: crystal structure of o-succinylbenzoate synthase from2 thermosynechococcus elongatus bp-1
112d1jdfa1



not modelled 100.0 15 Fold:TIM beta/alpha-barrel
Superfamily:Enolase C-terminal domain-like
Family:D-glucarate dehydratase-like
113c2fymA_



not modelled 100.0 17 PDB header:lyase
Chain: A: PDB Molecule:enolase;
PDBTitle: crystal structure of e. coli enolase complexed with the2 minimal binding segment of rnase e.
114c1iyxA_



not modelled 100.0 20 PDB header:lyase
Chain: A: PDB Molecule:enolase;
PDBTitle: crystal structure of enolase from enterococcus hirae
115c2ptwA_



not modelled 100.0 13 PDB header:lyase
Chain: A: PDB Molecule:enolase;
PDBTitle: crystal structure of the t. brucei enolase complexed with2 sulphate, identification of a metal binding site iv
116c2akmA_



not modelled 100.0 15 PDB header:lyase
Chain: A: PDB Molecule:gamma enolase;
PDBTitle: fluoride inhibition of enolase: crystal structure of the2 inhibitory complex
117d1jpma1



not modelled 100.0 15 Fold:TIM beta/alpha-barrel
Superfamily:Enolase C-terminal domain-like
Family:D-glucarate dehydratase-like
118d1bqga1



not modelled 100.0 17 Fold:TIM beta/alpha-barrel
Superfamily:Enolase C-terminal domain-like
Family:D-glucarate dehydratase-like
119c3qtpB_



not modelled 100.0 17 PDB header:lyase
Chain: B: PDB Molecule:enolase 1;
PDBTitle: crystal structure analysis of entamoeba histolytica enolase
120c3otrC_



not modelled 100.0 17 PDB header:lyase
Chain: C: PDB Molecule:enolase;
PDBTitle: 2.75 angstrom crystal structure of enolase 1 from toxoplasma gondii

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite



Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
 
© Structural Bioinformatics Group
Imperial College London
Lawrence Kelley, Benjamin Jefferys
Disclaimer
Terms and Conditions
Component software
Template detection: HHpred 1.51
Secondary structure prediction: Psi-pred 2.5
Disorder prediction: Disopred 2.4
Transmembrane prediction: Memsat_SVM
Multi-template modelling and ab initio: Poing 1.0