PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3msyC_

Fold library id	PDB Header	Molecule	Title
c3msyC_	PDB header: isomerase	Chain: C: PDB Molecule: mandelate racemase/muconate lactonizing enzyme;	PDBTitle: crystal structure of mandelate racemase/muconate lactonizing enzyme2 from a marine actinobacterium

Links to external resources
Added to library: Sat Aug 28 17:55:19 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence I P X V A P L A R E F R G S H T H R A T I V T R V H T D A G I I G E A Y T G D E H E T X F D I D R I I H E E L A P T L I G Q D A X A I E R L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
S S S
S S S T G G G T T T S B T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence W D S G Y K V T F D I L R D R R L G L V A L A A V N T A I W D A V G K A L K X P L W K L W G G Y R N E L P X I A I G G Y Y G E P L G S I A D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G G
S S S
T T
B T T
S
S
T T
T T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence E X H N Y Q E L G L A G V K F K V G G L S A A E D A A R I T A A R E A A G D D F I I C I D A N Q G Y K P A V A V D L S R R I A D L N I R W F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T B
S S S
S S S
T T
B
T T T S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence E E P V E W H N D K R S X R D V R Y Q G S V P V C A G Q T E F S A S G C R D L X E T G A I D V C N F D S S W S G G P T A W L R T A A I A T S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
B
S T T S S S
T T
S S T
S
G G G T T

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence Y D V Q X G H H E E P Q V S T H L L A S Q P H G T I A E C F H P D R D P F W W N X I T N R P K L N N G T L T L S D R P G L G W D L N W D Y I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
S T T B
T T T
B S S
B T B
S B T
B

. . . . .

Sequence D Q Y R V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) B

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	I	P	X	V	A	P	L	A	R	E	F	R	G	S	H	T	H	R	A	T	I	V	T	R	V	H	T	D	A	G	I	I	G	E	A	Y	T	G	D	E	H	E	T	X	F	D	I	D	R	I	I	H	E	E	L	A	P	T	L	I	G	Q	D	A	X	A	I	E	R	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B																										S	S	S											S	S	S												T	G	G	G	T	T	T	S	B	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	W	D	S	G	Y	K	V	T	F	D	I	L	R	D	R	R	L	G	L	V	A	L	A	A	V	N	T	A	I	W	D	A	V	G	K	A	L	K	X	P	L	W	K	L	W	G	G	Y	R	N	E	L	P	X	I	A	I	G	G	Y	Y	G	E	P	L	G	S	I	A	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					G	G	G	G			S	S	S																								T	T		B					T	T		S		S											T	T		T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	X	H	N	Y	Q	E	L	G	L	A	G	V	K	F	K	V	G	G	L	S	A	A	E	D	A	A	R	I	T	A	A	R	E	A	A	G	D	D	F	I	I	C	I	D	A	N	Q	G	Y	K	P	A	V	A	V	D	L	S	R	R	I	A	D	L	N	I	R	W	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	B								S	S	S																		S	S	S							T	T		B												T	T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	E	E	P	V	E	W	H	N	D	K	R	S	X	R	D	V	R	Y	Q	G	S	V	P	V	C	A	G	Q	T	E	F	S	A	S	G	C	R	D	L	X	E	T	G	A	I	D	V	C	N	F	D	S	S	W	S	G	G	P	T	A	W	L	R	T	A	A	I	A	T	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S		B		S	T	T												S	S	S						T	T		S	S											T			S						G	G	G	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	Y	D	V	Q	X	G	H	H	E	E	P	Q	V	S	T	H	L	L	A	S	Q	P	H	G	T	I	A	E	C	F	H	P	D	R	D	P	F	W	W	N	X	I	T	N	R	P	K	L	N	N	G	T	L	T	L	S	D	R	P	G	L	G	W	D	L	N	W	D	Y	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T							S												S	T	T	B								T	T	T								B	S	S					B	T	B								S	B	T				B
	.	.	.	.	.
Sequence	D	Q	Y	R	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				B