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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c1ec8B_

Fold library idPDB HeaderMoleculeTitle
c1ec8B_PDB header: lyaseChain: B: PDB Molecule: glucarate dehydratase;PDBTitle: e. coli glucarate dehydratase bound to product 2,3-2 dihydroxy-5-oxo-hexanedioate


Added to library: Tue Mar 16 13:42:52 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence FTTPVVTEMQVIPVAGHDSMLMNLSGAHAPFFTRNIVIIKDNSGHTGVGEIPGGEKIRKTLEDAIPLVVG
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Known secondary structure (DSSP)



B


TT

STTS


TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence KTLGEYKNVLTLVRNTFADRDAGGRGLQTFDLRTTIHVVTGIEAAMLDLLGQHLGVNVASLLGDGQQRSE
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Known secondary structure (DSSP)
BGGGTGGGGTT
S
SSSS


STT
BGGGGSTTS


S
 .........150.........160.........170.........180.........190.........200.........210
Sequence VEMLGYLFFVGNRKATPLPYQSQPDDSCDWYRLRHEEAMTPDAVVRLAEAAYEKYGFNDFKLKGGVLAGE
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Known secondary structure (DSSP) B



GGGS
S




TT
SSTTS
B
S

S

SSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence EEAESIVALAQRFPQARITLDPNGAWSLNEAIKIGKYLKGSLAYAEDPCGAEQGFSGREVMAEFRRATGL
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Known secondary structure (DSSP)
TTS

TT
B
TTTT
SS
B

BTTB


 .........290.........300.........310.........320.........330.........340.........350
Sequence PTATNMIATDWRQMGHTLSLQSVDIPLADPHFWTMQGSVRVAQMCHEFGLTWGSHSNNHFDISLAMFTHV
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Known secondary structure (DSSP)
SSSSSST

SB


T


B



S

 .........360.........370.........380.........390.........400.........410.........420
Sequence AAAAPGKITAIDTHWIWQEGNQRLTKEPFEIKGGLVQVPEKPGLGVEIDMDQVMKAHELYQKHGLGARDD
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Known secondary structure (DSSP) T

S



B


TTT

SBSS



BTT


SSBT


B
TT

S

S
 .........430.........440..
Sequence AMGMQYLIPGWTFDNKRPCMVR
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Known secondary structure (DSSP) TTSTT



TTS
TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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