PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c1nu5A_

Fold library id	PDB Header	Molecule	Title
c1nu5A_	PDB header: isomerase	Chain: A: PDB Molecule: chloromuconate cycloisomerase;	PDBTitle: crystal structure of pseudomonas sp. p51 chloromuconate2 lactonizing enzyme

Links to external resources
Added to library: Tue Mar 16 12:28:18 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M K I E A I S T T I V D V P T R R P L Q M S F T T V H K Q S Y V I V Q V K A G G L V G I G E G G S V G G P T W G S E S A E T I K V I I D N Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B T T T T
S T T T T T S S
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L A P L L V G K D A S N L S Q A R V L M D R A V T G N L S A K A A I D I A L H D L K A R A L N L S I A D L I G G T M R T S I P I A W T L A S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S B T T
S S
T T
B T
S
S B
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence G D T A R D I D S A L E M I E T R R H N R F K V K L G A R T P A Q D L E H I R S I V K A V G D R A S V R V D V N Q G W D E Q T A S I W I P R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T S
S
S S S
G G G
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence L E E A G V E L V E Q P V P R A N F G A L R R L T E Q N G V A I L A D E S L S S L S S A F E L A R D H A V D A F S L K L C N M G G I A N T L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S
T T
S S S T T
S T T
S
T S

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence K V A A V A E A A G I S S Y G G T M L D S T V G T A A A L H V Y A T L P S L P Y G C E L I G P W V L G D R L T Q Q D L E I K D F E V H L P L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S
T T S S
T T
B
B S S
S B S S
T T

. . . . . . . . . 360 . . . . . . . . .

Sequence G S G L G V D L D H D K V R H Y T R A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S B T S
B
B

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	K	I	E	A	I	S	T	T	I	V	D	V	P	T	R	R	P	L	Q	M	S	F	T	T	V	H	K	Q	S	Y	V	I	V	Q	V	K	A	G	G	L	V	G	I	G	E	G	G	S	V	G	G	P	T	W	G	S	E	S	A	E	T	I	K	V	I	I	D	N	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B																				T	T																T	T										S	T	T	T	T	T	S	S													T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	A	P	L	L	V	G	K	D	A	S	N	L	S	Q	A	R	V	L	M	D	R	A	V	T	G	N	L	S	A	K	A	A	I	D	I	A	L	H	D	L	K	A	R	A	L	N	L	S	I	A	D	L	I	G	G	T	M	R	T	S	I	P	I	A	W	T	L	A	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	S	B	T	T														S	S																				T	T		B						T			S		S				B						S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	D	T	A	R	D	I	D	S	A	L	E	M	I	E	T	R	R	H	N	R	F	K	V	K	L	G	A	R	T	P	A	Q	D	L	E	H	I	R	S	I	V	K	A	V	G	D	R	A	S	V	R	V	D	V	N	Q	G	W	D	E	Q	T	A	S	I	W	I	P	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S															T	T	S		S							S	S	S																	G	G	G								T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	L	E	E	A	G	V	E	L	V	E	Q	P	V	P	R	A	N	F	G	A	L	R	R	L	T	E	Q	N	G	V	A	I	L	A	D	E	S	L	S	S	L	S	S	A	F	E	L	A	R	D	H	A	V	D	A	F	S	L	K	L	C	N	M	G	G	I	A	N	T	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T								S		T	T													S	S					S	T	T			S										T	T			S										T	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	K	V	A	A	V	A	E	A	A	G	I	S	S	Y	G	G	T	M	L	D	S	T	V	G	T	A	A	A	L	H	V	Y	A	T	L	P	S	L	P	Y	G	C	E	L	I	G	P	W	V	L	G	D	R	L	T	Q	Q	D	L	E	I	K	D	F	E	V	H	L	P	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T								S	S														T	T	S	S			T	T		B								B	S	S		S	B	S	S						T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Sequence	G	S	G	L	G	V	D	L	D	H	D	K	V	R	H	Y	T	R	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	B	T	S			B									B