PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3eezA_

Fold library id	PDB Header	Molecule	Title
c3eezA_	PDB header: isomerase	Chain: A: PDB Molecule: putative mandelate racemase/muconate lactonizing	PDBTitle: crystal structure of a putative mandelate racemase/muconate2 lactonizing enzyme from silicibacter pomeroyi

Links to external resources
Added to library: Tue Mar 16 13:24:00 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence L K I T R I T V Y Q V D L P L E H P Y W K F E L L D A T L V K L E T D A G I T G W G E G T P W G H T Y V P A H G P G I R A G I E T M A P F V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B S S
T T
S
S S S S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L G L D P R R L L D V E R A M D I A L P G H L Y A K S P I D M A C W D I A G Q A A G L P I A D L M G G G S R T P R P I A S S V G A K S V E E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
T T
S S S
T T S B T T
S
B B
B
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence T R A V I D R Y R Q R G Y V A H S V K I G G D V E R D I A R I R D V E D I R E P G E I V L Y D V N R G W T R Q Q A L R V M R A T E D L H V M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
T T S
T T
T T
T G G G T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence F E Q P G E T L D D I A A I R P L H S A P V S V D E C L V T L Q D A A R V A R D G L A E V F G I K L N R V G G L T R A A R M R D I A L T H G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S T G G G
T T
S T T
S T S T T

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence I D M F V M A T G G S V L A D A E A L H L A A T I P D H A C H A V W A C Q D M L T V D I A G G R G P R N I D G H L H L P E T P G L G V H P D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S T S
G G G B
B
S G G G B S
T T T T
S S
B T T
S S B T S

. . . . . . . . . 360 . . .

Sequence E D A L G D P V A V Y S E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S S
S
S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	K	I	T	R	I	T	V	Y	Q	V	D	L	P	L	E	H	P	Y	W	K	F	E	L	L	D	A	T	L	V	K	L	E	T	D	A	G	I	T	G	W	G	E	G	T	P	W	G	H	T	Y	V	P	A	H	G	P	G	I	R	A	G	I	E	T	M	A	P	F	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															B	S	S																		T	T											S		S	S	S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	G	L	D	P	R	R	L	L	D	V	E	R	A	M	D	I	A	L	P	G	H	L	Y	A	K	S	P	I	D	M	A	C	W	D	I	A	G	Q	A	A	G	L	P	I	A	D	L	M	G	G	G	S	R	T	P	R	P	I	A	S	S	V	G	A	K	S	V	E	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S		T	T													S	S	S																				T	T	S	B					T	T					S				B	B			B		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	R	A	V	I	D	R	Y	R	Q	R	G	Y	V	A	H	S	V	K	I	G	G	D	V	E	R	D	I	A	R	I	R	D	V	E	D	I	R	E	P	G	E	I	V	L	Y	D	V	N	R	G	W	T	R	Q	Q	A	L	R	V	M	R	A	T	E	D	L	H	V	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T										S													T	T	S			T	T								T	T														T	G	G	G	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	F	E	Q	P	G	E	T	L	D	D	I	A	A	I	R	P	L	H	S	A	P	V	S	V	D	E	C	L	V	T	L	Q	D	A	A	R	V	A	R	D	G	L	A	E	V	F	G	I	K	L	N	R	V	G	G	L	T	R	A	A	R	M	R	D	I	A	L	T	H	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S	S							T	G	G	G									T	T			S										T	T			S										T	S														T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	I	D	M	F	V	M	A	T	G	G	S	V	L	A	D	A	E	A	L	H	L	A	A	T	I	P	D	H	A	C	H	A	V	W	A	C	Q	D	M	L	T	V	D	I	A	G	G	R	G	P	R	N	I	D	G	H	L	H	L	P	E	T	P	G	L	G	V	H	P	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S		S													T	S		G	G	G	B			B			S	G	G	G	B	S			T	T	T	T		S	S			B	T	T							S	S	B	T	S
	.	.	.	.	.	.	.	.	.	360	.	.	.
Sequence	E	D	A	L	G	D	P	V	A	V	Y	S	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S	S		S		S