PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3dg7B_

Fold library id	PDB Header	Molecule	Title
c3dg7B_	PDB header: isomerase	Chain: B: PDB Molecule: muconate cycloisomerase;	PDBTitle: crystal structure of muconate lactonizing enzyme from2 mucobacterium smegmatis complexed with muconolactone

Links to external resources
Added to library: Tue Mar 16 14:00:04 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M K I V A I G A I P F S I P Y T K P L R F A S G E V H A A E H V L V R V H T D D G I V G V A E A P P R P F T Y G E T Q T G I V A V I E Q Y F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B B
T T
T T S
T T T T
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A P A L I G L T L T E R E V A H T R M A R T V G N P T A K A A I D M A M W D A L G Q S L R L S V S E M L G G Y T D R M R V S H M L G F D D P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
B T T
T T S
T
B T
S
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence V K M V A E A E R I R E T Y G I N T F K V K V G R R P V Q L D T A V V R A L R E R F G D A I E L Y V D G N R G W S A A E S L R A M R E M A D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S T G G G S
T T
S
T T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence L D L L F A E E L C P A D D V L S R R R L V G Q L D M P F I A D E S V P T P A D V T R E V L G G S A T A I S I K T A R T G F T G S T R V H H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S
S
S
T T S
S S
T T
S S T S
S
T T

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence L A E G L G L D M V M G N Q I D G Q I G T A C T V S F G T A F E R T S R H A G E L S N F L D M S D D L L T V P L Q I S D G Q L H R R P G P G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S
T T
T S
G G G G B S
S B S S
B T T
S S S B

. . . . . . . . . 360 . . . . . .

Sequence L G I E I D P D K L A H Y R T D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
B
B

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	K	I	V	A	I	G	A	I	P	F	S	I	P	Y	T	K	P	L	R	F	A	S	G	E	V	H	A	A	E	H	V	L	V	R	V	H	T	D	D	G	I	V	G	V	A	E	A	P	P	R	P	F	T	Y	G	E	T	Q	T	G	I	V	A	V	I	E	Q	Y	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B									B											T	T																T	T	S											T	T	T	T														T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	P	A	L	I	G	L	T	L	T	E	R	E	V	A	H	T	R	M	A	R	T	V	G	N	P	T	A	K	A	A	I	D	M	A	M	W	D	A	L	G	Q	S	L	R	L	S	V	S	E	M	L	G	G	Y	T	D	R	M	R	V	S	H	M	L	G	F	D	D	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T		B	T	T										T	T	S																							T		B						T				S										S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	K	M	V	A	E	A	E	R	I	R	E	T	Y	G	I	N	T	F	K	V	K	V	G	R	R	P	V	Q	L	D	T	A	V	V	R	A	L	R	E	R	F	G	D	A	I	E	L	Y	V	D	G	N	R	G	W	S	A	A	E	S	L	R	A	M	R	E	M	A	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																										S	S	T															G	G	G	S							T	T		S												T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	L	D	L	L	F	A	E	E	L	C	P	A	D	D	V	L	S	R	R	R	L	V	G	Q	L	D	M	P	F	I	A	D	E	S	V	P	T	P	A	D	V	T	R	E	V	L	G	G	S	A	T	A	I	S	I	K	T	A	R	T	G	F	T	G	S	T	R	V	H	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S			S				S		S		T	T	S												S	S						T	T		S	S											T	S		S										T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	L	A	E	G	L	G	L	D	M	V	M	G	N	Q	I	D	G	Q	I	G	T	A	C	T	V	S	F	G	T	A	F	E	R	T	S	R	H	A	G	E	L	S	N	F	L	D	M	S	D	D	L	L	T	V	P	L	Q	I	S	D	G	Q	L	H	R	R	P	G	P	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T								S	S														T	T						T	S						G	G	G	G	B	S			S	B	S	S					B	T	T						S	S	S	B
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Sequence	L	G	I	E	I	D	P	D	K	L	A	H	Y	R	T	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S			B									B