07/01/2012 01:20:29 : INFO  : Run start: Sat Jan  7 01:20:29 GMT 2012
07/01/2012 01:20:30 : INFO  : Initialised job
07/01/2012 01:20:31 : INFO  : Renaming log file 'phyre2_20120107_012029.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/3ca030754a3a0558/phyre_20120107_012029.log'
07/01/2012 01:20:31 : INFO  : Initialised job:
Sequence
>batch____
MTLPKIKQVRAWFTGGATAEKGAGGGDYHDQGANHWIDDHIATPMSKYRDYEQSRQSFGI
NVLGTLVVEVEAENGQTGFAVSTAGEMGCFIVEKHLNRFIEGKCVSDIKLIHDQMLSATL
YYSGSGGLVMNTISCVDLALWDLFGKVVGLPVYKLLGGAVRDEIQFYATGARPDLAKEMG
FIGGKMPTHWGPHDGDAGIRKDAAMVADMREKCGEDFWLMLDCWMSQDVNYATKLAHACA
PYNLKWIEECLPPQQYESYRELKRNAPVGMMVTSGEHHGTLQSFRTLSETGIDIMQPDVG
WCGGLTTLVEIAAIAKSRGQLVVPHGSSVYSHHAVITFTNTPFSEFLMTSPDCSTMRPQF
DPILLNEPVPVNGRIHKSVLDKPGFGVELNRDCNLKRPYSH

07/01/2012 01:20:31 : INFO  : Checked sequence
07/01/2012 01:20:32 : INFO  : Finding homologues with PSI-BLAST
07/01/2012 01:20:32 : INFO  : PSI-BLAST 3 iterations
07/01/2012 01:22:46 : INFO  : PSI-BLAST 5 iterations
07/01/2012 01:25:04 : INFO  : Finished PSI-BLAST
07/01/2012 01:25:05 : INFO  : Running Buildali to generate a3m file
07/01/2012 01:31:48 : INFO  : Converting to HMM
07/01/2012 01:31:52 : INFO  : Calibrating HMM
07/01/2012 01:32:04 : INFO  : Searching HMM database
07/01/2012 01:41:58 : INFO  : Finished buildali
07/01/2012 01:41:58 : INFO  : Predicting secondary structure
07/01/2012 01:42:05 : INFO  : Predicted secondary structure (PSI-Pred)
07/01/2012 01:42:06 : INFO  : Predicting Disordered regions
07/01/2012 01:42:07 : INFO  : Predicted Disorder (Disopred)
07/01/2012 01:42:07 : INFO  : Running memsat_svm check
07/01/2012 01:43:51 : INFO  : Running memsat_svm full
07/01/2012 01:47:06 : INFO  : Predicted Transmembrane (memsat_svm) ID '3ca030754a3a0558'
07/01/2012 01:47:06 : INFO  : Initialising fold library search
07/01/2012 01:47:07 : INFO  : Initialised search input
07/01/2012 01:47:08 : INFO  : Building Ensemble models
07/01/2012 01:47:09 : INFO  : Building hh.c3cxoA_.model.1.pdb
07/01/2012 01:47:13 : INFO  : Building c3cxoA_.1.pdb
07/01/2012 01:47:18 : INFO  : Building c2oz3F_.2.pdb
07/01/2012 01:47:22 : INFO  : Building c2p0iA_.3.pdb
07/01/2012 01:47:27 : INFO  : Building c2o56D_.4.pdb
07/01/2012 01:47:31 : INFO  : Building c2hxtA_.5.pdb
07/01/2012 01:47:36 : INFO  : Building c2pp1C_.6.pdb
07/01/2012 01:47:40 : INFO  : Building c2ox4E_.7.pdb
07/01/2012 01:47:45 : INFO  : Building c2nqlB_.8.pdb
07/01/2012 01:47:50 : INFO  : Building c3t6cB_.9.pdb
07/01/2012 01:47:55 : INFO  : Building c3thuC_.10.pdb
07/01/2012 01:48:00 : INFO  : Building c3tjiA_.11.pdb
07/01/2012 01:48:05 : INFO  : Building c3h12B_.12.pdb
07/01/2012 01:48:11 : INFO  : Building c2oo6A_.13.pdb
07/01/2012 01:48:16 : INFO  : Building c3rcyC_.14.pdb
07/01/2012 01:48:21 : INFO  : Building c3n6jA_.15.pdb
07/01/2012 01:48:27 : INFO  : Building c2gl5A_.16.pdb
07/01/2012 01:48:34 : INFO  : Building c2qgyA_.17.pdb
07/01/2012 01:48:40 : INFO  : Building c3sqsA_.18.pdb
07/01/2012 01:48:45 : INFO  : Building c1rvkA_.19.pdb
07/01/2012 01:48:50 : INFO  : Building c2qjjC_.20.pdb
07/01/2012 01:49:03 : INFO  : Finished HH model building
07/01/2012 01:49:05 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
07/01/2012 01:49:39 : INFO  : html domain output complete ID '3ca030754a3a0558'
07/01/2012 04:32:37 : INFO  : Run end  : Sat Jan  7 04:32:37 GMT 2012
