PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3fv9D_

Fold library id	PDB Header	Molecule	Title
c3fv9D_	PDB header: hydrolase	Chain: D: PDB Molecule: mandelate racemase/muconate lactonizing enzyme;	PDBTitle: crystal structure of putative mandelate2 racemase/muconatelactonizing enzyme from roseovarius3 nubinhibens ism complexed with magnesium

Links to external resources
Added to library: Tue Mar 16 13:15:11 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence L K I T R I D I H R T D L P V R G G V Y R L S G G R E Y H S Y D A T I V S I E T D T G L T G W G E S T P F G S T Y I A A H A G G T R A A L E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B S S S
G G G S T T S
S T T S S S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L L A P A I L G M D P R Q H D R I W D R M R D T L K G H R D A R A A L D I A C W D I A A Q A A G L P L C D M T G G R V A G P V P V I S S I G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
T T
S S
T
B G G G T T T
S S
B

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence G D T P E A M R A K V A R H R A Q G F K G H S I K I G A S E A E G G P A L D A E R I T A C L A D R Q P G E W Y L A D A N N G L T V E H A L R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T
T T T T T T
T T
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence M L S L L P P G L D I V L E A P C A S W A E T K S L R A R C A L P L L L D E L I Q T E T D L I A A I R D D L C D G V G L K V S K Q G G I T P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S
S S T T
S
S T T
S T T
S T S

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence M L R Q R A I A A A A G M V M S V Q D T V G S Q I S F A A I L H L A Q S T P R H L L R C A L D T R A M T T A E L A E I D A P L R D G G A S A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S
T S
T T T
G G G T B
S
S B T T B B

. . . . . . . . . 360 . . . . . . . . . 370 . . .

Sequence P S D P G L G L R V N R D A L G T P V K T F G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S B T
G G G T
S
S

Download: PDB structure FASTA sequence
Hidden Markov model

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	K	I	T	R	I	D	I	H	R	T	D	L	P	V	R	G	G	V	Y	R	L	S	G	G	R	E	Y	H	S	Y	D	A	T	I	V	S	I	E	T	D	T	G	L	T	G	W	G	E	S	T	P	F	G	S	T	Y	I	A	A	H	A	G	G	T	R	A	A	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															B	S	S	S					G	G	G				S												T	T	S										S	T	T	S	S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	L	A	P	A	I	L	G	M	D	P	R	Q	H	D	R	I	W	D	R	M	R	D	T	L	K	G	H	R	D	A	R	A	A	L	D	I	A	C	W	D	I	A	A	Q	A	A	G	L	P	L	C	D	M	T	G	G	R	V	A	G	P	V	P	V	I	S	S	I	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	S		T	T														S	S																					T		B	G	G	G	T	T	T				S	S		B
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	D	T	P	E	A	M	R	A	K	V	A	R	H	R	A	Q	G	F	K	G	H	S	I	K	I	G	A	S	E	A	E	G	G	P	A	L	D	A	E	R	I	T	A	C	L	A	D	R	Q	P	G	E	W	Y	L	A	D	A	N	N	G	L	T	V	E	H	A	L	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S																	T												T	T	T	T														T	T			T	T								T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	M	L	S	L	L	P	P	G	L	D	I	V	L	E	A	P	C	A	S	W	A	E	T	K	S	L	R	A	R	C	A	L	P	L	L	L	D	E	L	I	Q	T	E	T	D	L	I	A	A	I	R	D	D	L	C	D	G	V	G	L	K	V	S	K	Q	G	G	I	T	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S		S	S										S	S									T	T			S					S	T	T			S										T	T			S										T	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	M	L	R	Q	R	A	I	A	A	A	A	G	M	V	M	S	V	Q	D	T	V	G	S	Q	I	S	F	A	A	I	L	H	L	A	Q	S	T	P	R	H	L	L	R	C	A	L	D	T	R	A	M	T	T	A	E	L	A	E	I	D	A	P	L	R	D	G	G	A	S	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T								S	S															T	S		T	T	T							G	G	G	T	B				S							S	B	T	T	B	B
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
Sequence	P	S	D	P	G	L	G	L	R	V	N	R	D	A	L	G	T	P	V	K	T	F	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	B	T						G	G	G	T		S		S