Fold library entry viewer: c1kkoB_

Added to library: Tue Mar 16 12:30:16 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	X	K	I	K	Q	A	L	F	T	A	G	Y	S	S	F	Y	F	D	D	Q	Q	A	I	K	N	G	A	G	H	D	G	F	I	Y	T	G	D	P	V	T	P	G	F	T	S	V	R	Q	A	G	E	C	V	S	V	Q	L	I	L	E	N	G	A	V	A	V	G	D	C	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B																													T	T				S				S	T	T		S	S	S														T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	V	Q	Y	S	G	A	G	G	R	D	P	L	F	L	A	E	H	F	I	P	F	L	N	D	H	I	K	P	L	L	E	G	R	D	V	D	A	F	L	P	N	A	R	F	F	D	K	L	R	I	D	G	N	L	L	H	T	A	V	R	Y	G	L	S	Q	A	L	L	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T	T	S	T	T																		T					T	T		B		S		S													T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	T	A	L	A	S	G	R	L	K	T	E	V	V	C	D	E	W	Q	L	P	C	V	P	E	A	I	P	L	F	G	Q	S	G	D	D	R	Y	I	A	V	D	K	X	I	L	K	G	V	D	V	L	P	H	A	L	I	N	N	V	E	E	K	L	G	F	K	G	E	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T												T															T	T		T	T									T	T		S					T	T										T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	L	R	E	Y	V	R	W	L	S	D	R	I	L	S	L	R	S	S	P	R	Y	H	P	T	L	H	I	D	V	Y	G	T	I	G	L	I	F	D	X	D	P	V	R	C	A	E	Y	I	A	S	L	E	K	E	A	Q	G	L	P	L	Y	I	E	G	P	V	D	A	G	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	S	S	T	T										T	T						T	T	T												T	T	G	G	G	T	T	S											S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	K	P	D	Q	I	R	X	L	T	A	I	T	K	E	L	T	R	L	G	S	G	V	K	I	V	A	D	E	W	C	N	T	Y	Q	D	I	V	D	F	T	D	A	G	S	C	H	X	V	Q	I	K	T	P	D	L	G	G	I	H	N	I	V	D	A	V	L	Y	C	N	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			T									T	T			S										T	T			S						G	G	G	G	S	S	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
Sequence	H	G	X	E	A	Y	Q	G	G	T	C	N	E	T	E	I	S	A	R	T	C	V	H	V	A	L	A	A	R	P	X	R	X	L	I	K	P	G	X	G	F	D	E	G	L	N	I	V	F	N	E	X	N	R	T	I	A	L	L	Q	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T									T	T	S																		S						S	S	S	S	S																			T

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PDB structure

FASTA sequence

Hidden Markov model

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