PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2pmqA_

Fold library id	PDB Header	Molecule	Title
c2pmqA_	PDB header: isomerase	Chain: A: PDB Molecule: mandelate racemase/muconate lactonizing enzyme;	PDBTitle: crystal structure of a mandelate racemase/muconate2 lactonizing enzyme from roseovarius sp. htcc2601

Links to external resources
Added to library: Tue Mar 16 12:26:13 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence K I A E I Q L F Q H D L P V V N G P Y R I A S G D V W S L T T T I V K I I A E D G T I G W G E T C P V G P T Y A E A H A G G A L A A L E V L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
B
T T
B S T T S
S S S S S S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A S G L A G A E A L P L P L H T R X D S L L C G H N Y A K S A L D I A V H D L W G K R L G V P V H E L L G G A L T D S V S S Y Y S L G V X E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T
S S
S
T
B T T
S
S
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence P D E A A R Q A L E K Q R E G Y S R L Q V K L G A R P I E I D I E A I R K V W E A V R G T G I A L A A D G N R G W T T R D A L R F S R E C P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S
S S
T T S
T T
T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence D I P F V X E Q P C N S F E D L E A I R P L C H H A L Y X D E D G T S L N T V I T A A A T S L V D G F G X K V S R I G G L Q H X R A F R D F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
S
S S S G G G
S
S T T
S T T
S
B T S

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence C A A R N L P H T C D D A W G G D I V S A A C T H I A S T V L P R L X E G A W L A Q P Y V A E H Y D A E N G V R I E G G R I R V P Q G P G L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
B
S S
S T T S
G G G
S G G G
S
S S T T T
T T
S S B T

. . . . . . . . . 360 . . . . . . .

Sequence G L T I D P E R F G P P L F S A E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T T T
S
S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	I	A	E	I	Q	L	F	Q	H	D	L	P	V	V	N	G	P	Y	R	I	A	S	G	D	V	W	S	L	T	T	T	I	V	K	I	I	A	E	D	G	T	I	G	W	G	E	T	C	P	V	G	P	T	Y	A	E	A	H	A	G	G	A	L	A	A	L	E	V	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	T			B			T	T			B	S												T	T	S										S	S	S	S	S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	S	G	L	A	G	A	E	A	L	P	L	P	L	H	T	R	X	D	S	L	L	C	G	H	N	Y	A	K	S	A	L	D	I	A	V	H	D	L	W	G	K	R	L	G	V	P	V	H	E	L	L	G	G	A	L	T	D	S	V	S	S	Y	Y	S	L	G	V	X	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T	T			S	S													S																						T		B					T	T			S		S										S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	D	E	A	A	R	Q	A	L	E	K	Q	R	E	G	Y	S	R	L	Q	V	K	L	G	A	R	P	I	E	I	D	I	E	A	I	R	K	V	W	E	A	V	R	G	T	G	I	A	L	A	A	D	G	N	R	G	W	T	T	R	D	A	L	R	F	S	R	E	C	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T		S								S	S																	T	T	S									T	T															T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	D	I	P	F	V	X	E	Q	P	C	N	S	F	E	D	L	E	A	I	R	P	L	C	H	H	A	L	Y	X	D	E	D	G	T	S	L	N	T	V	I	T	A	A	A	T	S	L	V	D	G	F	G	X	K	V	S	R	I	G	G	L	Q	H	X	R	A	F	R	D	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S						S		S	S	S								G	G	G			S					S	T	T			S										T	T			S					B					T	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	C	A	A	R	N	L	P	H	T	C	D	D	A	W	G	G	D	I	V	S	A	A	C	T	H	I	A	S	T	V	L	P	R	L	X	E	G	A	W	L	A	Q	P	Y	V	A	E	H	Y	D	A	E	N	G	V	R	I	E	G	G	R	I	R	V	P	Q	G	P	G	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T						B		S	S		S												T	T	S		G	G	G							S	G	G	G		S			S	S	T	T	T						T	T							S	S	B	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Sequence	G	L	T	I	D	P	E	R	F	G	P	P	L	F	S	A	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S					T	T	T	T		S		S