Phyre Home Retrieve Phyre Job Id
Emaill.a.kelley@imperial.ac.uk
DescriptionQ13625
DateWed Jun 6 09:54:47 BST 2012
Unique Job ID33a7e286649eba5a

Summary 

Top model
Image coloured by rainbow N → C terminus
Model (left) based on template c1ycsB_
Top template information
PDB header:complex (anti-oncogene/ankyrin repeats)
Chain: B: PDB Molecule:53bp2;
PDBTitle: p53-53bp2 complex
Confidence and coverage
Confidence:100.0% Coverage: 17%
193 residues ( 17% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
276 residues ( 24%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
Warning: 57% of your sequence is predicted disordered. Disordered regions cannot be meaningfully predicted.
3D viewing
Interactive 3D view in Jmol

Sequence analysis 

Secondary structure and disorder prediction 

   1........10.........20.........30.........40.........50.........60
Sequence  MMPMFLTVYLSNNEQHFTEVPVTPETICRDVVDLCKEPGESDCHLAEVWCGSERPVADNE
Secondary structure 



























SS confidence 



























































Disorder  ???
















































?
????

Disorder confidence 



























































 
   .........70.........80.........90.........100.........110.........120
Sequence  RMFDVLQRFGSQRNEVRFFLRHERPPGRDIVSGPRSQDPSLKRNGVKVPGEYRRKENGVN
Secondary structure 

























SS confidence 



























































Disorder 












?









?????????????




????????





????
Disorder confidence 



























































 
   .........130.........140.........150.........160.........170.........180
Sequence  SPRMDLTLAELQEMASRQQQQIEAQQQLLATKEQRLKFLKQQDQRQQQQVAEQEKLKRLK
Secondary structure 
SS confidence 



























































Disorder  ???















































?







Disorder confidence 



























































 
   .........190.........200.........210.........220.........230.........240
Sequence  EIAENQEAKLKKVRALKGHVEQKRLSNGKLVEEIEQMNNLFQQKQRELVLAVSKVEELTR
Secondary structure 
SS confidence 



























































Disorder 















??








??






























Disorder confidence 



























































 
   .........250.........260.........270.........280.........290.........300
Sequence  QLEMLKNGRIDSHHDNQSAVAELDRLYKELQLRNKLNQEQNAKLQQQRECLNKRNSEVAV
Secondary structure 











SS confidence 



























































Disorder 





?????????????






??????????????????















Disorder confidence 



























































 
   .........310.........320.........330.........340.........350.........360
Sequence  MDKRVNELRDRLWKKKAALQQKENLPVSSDGNLPQQAASAPSRVAAVGPYIQSSTMPRMP
Secondary structure 





































SS confidence 



























































Disorder 











????????????????????????????????????????????????
Disorder confidence 



























































 
   .........370.........380.........390.........400.........410.........420
Sequence  SRPELLVKPALPDGSLVIQASEGPMKIQTLPNMRSGAASQTKGSKIHPVGPDWSPSNADL
Secondary structure 

























































SS confidence 



























































Disorder  ????????????????????????????????????????????????????????????
Disorder confidence 



























































 
   .........430.........440.........450.........460.........470.........480
Sequence  FPSQGSASVPQSTGNALDQVDDGEVPLREKEKKVRPFSMFDAVDQSNAPPSFGTLRKNQS
Secondary structure 



























































SS confidence 



























































Disorder  ????????????????????????????????????????????????????????????
Disorder confidence 



























































 
   .........490.........500.........510.........520.........530.........540
Sequence  SEDILRDAQVANKNVAKVPPPVPTKPKQINLPYFGQTNQPPSDIKPDGSSQQLSTVVPSM
Secondary structure 



























































SS confidence 



























































Disorder  ????????????????????????????????????????????????????????????
Disorder confidence 



























































 
   .........550.........560.........570.........580.........590.........600
Sequence  GTKPKPAGQQPRVLLSPSIPSVGQDQTLSPGSKQESPPAAAVRPFTPQPSKDTLLPPFRK
Secondary structure 



























































SS confidence 



























































Disorder  ????????????????????????????????????????????????????????????
Disorder confidence 



























































 
   .........610.........620.........630.........640.........650.........660
Sequence  PQTVAASSIYSMYTQQQAPGKNFQQAVQSALTKTHTRGPHFSSVYGKPVIAAAQNQQQHP
Secondary structure 



























































SS confidence 



























































Disorder  ????????????????????????????????????????????????????????????
Disorder confidence 



























































 
   .........670.........680.........690.........700.........710.........720
Sequence  ENIYSNSQGKPGSPEPETEPVSSVQENHENERIPRPLSPTKLLPFLSNPYRNQSDADLEA
Secondary structure 

























































SS confidence 



























































Disorder  ???????????????????????????????????????????????????????




Disorder confidence 



























































 
   .........730.........740.........750.........760.........770.........780
Sequence  LRKKLSNAPRPLKKRSSITEPEGPNGPNIQKLLYQRTTIAAMETISVPSYPSKSASVTAS
Secondary structure 













































SS confidence 



























































Disorder 
???????????????????????????????????????????????????????????
Disorder confidence 



























































 
   .........790.........800.........810.........820.........830.........840
Sequence  SESPVEIQNPYLHVEPEKEVVSLVPESLSPEDVGNASTENSDMPAPSPGLDYEPEGVPDN
Secondary structure 





















































SS confidence 



























































Disorder  ???????????
?????????????????????????????






?
????????
?
Disorder confidence 



























































 
   .........850.........860.........870.........880.........890.........900
Sequence  SPNLQNNPEEPNPEAPHVLDVYLEEYPPYPPPPYPSGEPEGPGEDSVSMRPPEITGQVSL
Secondary structure 














































SS confidence 



























































Disorder  ???????????????????????
?






???
??????????

?



?





Disorder confidence 



























































 
   .........910.........920.........930.........940.........950.........960
Sequence  PPGKRTNLRKTGSERIAHGMRVKFNPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGI
Secondary structure 



























SS confidence 



























































Disorder 



























































Disorder confidence 



























































 
   .........970.........980.........990.........1000.........1010.........1020
Sequence  TALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFA
Secondary structure 


























SS confidence 



























































Disorder 




























?





























Disorder confidence 



























































 
   .........1030.........1040.........1050.........1060.........1070.........1080
Sequence  MTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKE
Secondary structure 





























SS confidence 



























































Disorder 































??
??
?












??





Disorder confidence 



























































 
   .........1090.........1100.........1110.........1120........
Sequence  GDCMTIIHREDEDEIEWWWARLNDKEGYVPRNLLGLYPRIKPRQRSLA
Secondary structure 





























SS confidence 















































Disorder 






??
??






















?

??????????
Disorder confidence 















































 

Confidence Key
High(9)                    Low (0)
?Disordered
Alpha helix
Beta strand

Domain analysis 

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

RankAligned region

PDB 1ycs chain B

3D model

Region: 926 - 1118
Aligned: 193
Modelled: 193
Confidence: 100.0%
Identity: 100%
PDB header:complex (anti-oncogene/ankyrin repeats)
Chain: B: PDB Molecule:53bp2;
PDBTitle: p53-53bp2 complex

Phyre2

PDB 2vge chain A

3D model

Region: 916 - 1121
Aligned: 206
Modelled: 206
Confidence: 100.0%
Identity: 52%
PDB header:transcription
Chain: A: PDB Molecule:rela-associated inhibitor;
PDBTitle: crystal structure of the c-terminal region of human iaspp

Phyre2

PDB 1ycs chain B domain 1

3D model

Region: 926 - 1055
Aligned: 130
Modelled: 130
Confidence: 99.8%
Identity: 100%
Fold: beta-hairpin-alpha-hairpin repeat
Superfamily: Ankyrin repeat
Family: Ankyrin repeat

Phyre2

PDB 1n11 chain A

3D model

Region: 924 - 1033
Aligned: 107
Modelled: 110
Confidence: 99.8%
Identity: 33%
Fold: beta-hairpin-alpha-hairpin repeat
Superfamily: Ankyrin repeat
Family: Ankyrin repeat

Phyre2

PDB 1n11 chain A

3D model

Region: 924 - 1033
Aligned: 107
Modelled: 110
Confidence: 99.8%
Identity: 33%
PDB header:structural protein
Chain: A: PDB Molecule:ankyrin;
PDBTitle: d34 region of human ankyrin-r and linker

Phyre2

PDB 3jue chain A

3D model

Region: 924 - 1051
Aligned: 125
Modelled: 128
Confidence: 99.7%
Identity: 23%
PDB header:protein transport/endocytosis
Chain: A: PDB Molecule:arfgap with coiled-coil, ank repeat and ph domain-
PDBTitle: crystal structure of arfgap and ank repeat domain of acap1

Phyre2

PDB 2b0o chain F

3D model

Region: 930 - 1047
Aligned: 115
Modelled: 118
Confidence: 99.7%
Identity: 26%
PDB header:metal binding protein
Chain: F: PDB Molecule:uplc1;
PDBTitle: crystal structure of uplc1 gap domain

Phyre2

PDB 3lvr chain E

3D model

Region: 926 - 1087
Aligned: 147
Modelled: 148
Confidence: 99.7%
Identity: 22%
PDB header:protein transport
Chain: E: PDB Molecule:arf-gap with sh3 domain, ank repeat and ph domain-
PDBTitle: the crystal structure of asap3 in complex with arf6 in transition2 state soaked with calcium

Phyre2

PDB 1s70 chain B

3D model

Region: 917 - 1058
Aligned: 135
Modelled: 142
Confidence: 99.7%
Identity: 45%
Fold: beta-hairpin-alpha-hairpin repeat
Superfamily: Ankyrin repeat
Family: Ankyrin repeat

Phyre2

PDB 3ui2 chain A

3D model

Region: 925 - 1098
Aligned: 169
Modelled: 174
Confidence: 99.7%
Identity: 20%
PDB header:transport protein
Chain: A: PDB Molecule:signal recognition particle 43 kda protein, chloroplastic;
PDBTitle: crystal structure of the cpsrp54 tail bound to cpsrp43

Phyre2

PDB 1dcq chain A

3D model

Region: 915 - 1021
Aligned: 107
Modelled: 107
Confidence: 99.6%
Identity: 21%
PDB header:metal binding protein
Chain: A: PDB Molecule:pyk2-associated protein beta;
PDBTitle: crystal structure of the arf-gap domain and ankyrin repeats2 of papbeta.

Phyre2

PDB 3kea chain B

3D model

Region: 923 - 1047
Aligned: 118
Modelled: 125
Confidence: 99.6%
Identity: 19%
PDB header:viral protein
Chain: B: PDB Molecule:k1l;
PDBTitle: structure function studies of vaccinia virus host-range protein k12 reveal a novel ankyrin repeat interaction surface for k1s function

Phyre2

PDB 3utm chain A

3D model

Region: 929 - 1014
Aligned: 82
Modelled: 86
Confidence: 99.6%
Identity: 24%
PDB header:transferase/signaling protein
Chain: A: PDB Molecule:tankyrase-1;
PDBTitle: crystal structure of a mouse tankyrase-axin complex

Phyre2

PDB 2aja chain A domain 1

3D model

Region: 928 - 1049
Aligned: 115
Modelled: 122
Confidence: 99.6%
Identity: 16%
Fold: alpha-alpha superhelix
Superfamily: Pseudo ankyrin repeat-like
Family: Pseudo ankyrin repeat

Phyre2

PDB 1dcq chain A domain 1

3D model

Region: 927 - 1047
Aligned: 118
Modelled: 121
Confidence: 99.6%
Identity: 25%
Fold: beta-hairpin-alpha-hairpin repeat
Superfamily: Ankyrin repeat
Family: Ankyrin repeat

Phyre2

PDB 2fo1 chain E

3D model

Region: 930 - 1013
Aligned: 84
Modelled: 84
Confidence: 99.6%
Identity: 21%
PDB header:gene regulation/signalling protein/dna
Chain: E: PDB Molecule:lin-12 protein;
PDBTitle: crystal structure of the csl-notch-mastermind ternary2 complex bound to dna

Phyre2

PDB 2aja chain A

3D model

Region: 923 - 1029
Aligned: 104
Modelled: 107
Confidence: 99.6%
Identity: 15%
PDB header:protein binding
Chain: A: PDB Molecule:ankyrin repeat family protein;
PDBTitle: x-ray structure of an ankyrin repeat family protein q5zsv02 from legionella pneumophila. northeast structural genomics3 consortium target lgr21.

Phyre2

PDB 2fo1 chain E domain 1

3D model

Region: 930 - 1013
Aligned: 84
Modelled: 84
Confidence: 99.6%
Identity: 20%
Fold: beta-hairpin-alpha-hairpin repeat
Superfamily: Ankyrin repeat
Family: Ankyrin repeat

Phyre2

PDB 3ljn chain A

3D model

Region: 955 - 1055
Aligned: 96
Modelled: 101
Confidence: 99.5%
Identity: 24%
PDB header:unknown function
Chain: A: PDB Molecule:hypothetical protein;
PDBTitle: ankyrin repeat protein from leishmania major

Phyre2

PDB 2rfa chain A

3D model

Region: 925 - 1018
Aligned: 91
Modelled: 94
Confidence: 99.5%
Identity: 36%
PDB header:membrane protein
Chain: A: PDB Molecule:transient receptor potential cation channel subfamily v
PDBTitle: crystal structure of the mouse trpv6 ankyrin repeat domain

Phyre2

PDB 2uwq chain A

3D model

Region: 1 - 83
Aligned: 83
Modelled: 83
Confidence: 98.9%
Identity: 100%
PDB header:apoptosis
Chain: A: PDB Molecule:apoptosis-stimulating of p53 protein 2;
PDBTitle: solution structure of aspp2 n-terminus

Phyre2
1

c1ycsB_
2

c2vgeA_
3

d1ycsb1
4

d1n11a_
5

c1n11A_
6

c3jueA_
7

c2b0oF_
8

c3lvrE_
9

d1s70b_
10

c3ui2A_
11

c1dcqA_
12

c3keaB_
13

c3utmA_
14

d2ajaa1
15

d1dcqa1
16

c2fo1E_
17

c2ajaA_
18

d2fo1e1
19

c3ljnA_
20

c2rfaA_
21



22



23



24



25



26



27



28



29



30



31



32



33



34



35



36



37



38



39



40



41



42



43



44



45



46



47



48



49



50



51



52



53



54



55



56



57



58



59



60



61



62



63



64



65



66



67



68



69



70



71



72



73



74



75



76



77



78



79



80



81



82



83



84



85



86



87



88



89



90



91



92



93



94



95



96



97



98



99



100



101



102



103



104



105



106



107



108



109



110



111



112



113



114



115



116



117



118



119



120



121



122



123



124



125



126



127



128



129



130



131



132



133



134



135



136



137



138



139



140



141



142



143



144



145



146



147



148



149



150



151



152



153



154

c2uwqA_
155



156



157



158



159



160



161



162



163



164



165



166



167



168



169



170



171



172



173



174



175



176



177



178



179



180



181



182



183



184



185



186



187



188



189



190



191



192



193



194



195



196



197



198



199



200



201



202



203



204



205



206



207



208



209



210



211



212



213



214



215



216



217



218



219



220



221



222



223



224



225



226



227



228



229



230



231



232



233



234



235



236



237



238



239



240



241



242



243



244



245



246



247



248



249



250



251



252



253



254



255



256



257



258



259



260



261



262



263



264



265



266



267



268



269



270



271



272



273



274



275



276



277



278



279



280



281



282



283



284



285



286



287



288



289



290



291



292



293



294



295



296



297



298



299



300



301



302



303



304



305



306



307



308



309



310



311



312



313



314



315



316



317



318



319



320



321



322



323



324



325



326



327



328



329



330



331



332



333



334



335



336



337



338



339



340



341



342



343



344



345



346



347



348



349



350



351



352



353



354



355



356



357



358



359



360



361



362



363



364



365



366



367



368



369



370



371



372



373



374



375



376



377



378



379



380



381



382



383



384



385



386



387



388



389



390



391



392



393



394



395



396



397



398



399



400



401



402



403



404



405



406



407



408



409



410



411



412



413



414



415



416



417



418



419



420



421



422



423



424



425



426



427



428



429



430



431



432



433



434



435



436



437



438



439



440



441



442



443



444



445



446



447



448



449



450



451



452



453



454



455



456



457



458



459



460



461



462



463



464



465



466



467



468



469



470



471



472



473



474



475



476



477



478



479



480



481



482



483



484



485



486



487



488



489



490



491



492



493



494



495



496



497



498



499






Detailed template information 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c1ycsB_



100.0 100 PDB header:complex (anti-oncogene/ankyrin repeats)
Chain: B: PDB Molecule:53bp2;
PDBTitle: p53-53bp2 complex
2c2vgeA_



100.0 52 PDB header:transcription
Chain: A: PDB Molecule:rela-associated inhibitor;
PDBTitle: crystal structure of the c-terminal region of human iaspp
3d1ycsb1



99.8 100 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
4d1n11a_



99.8 33 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
5c1n11A_



99.8 33 PDB header:structural protein
Chain: A: PDB Molecule:ankyrin;
PDBTitle: d34 region of human ankyrin-r and linker
6c3jueA_



99.7 23 PDB header:protein transport/endocytosis
Chain: A: PDB Molecule:arfgap with coiled-coil, ank repeat and ph domain-
PDBTitle: crystal structure of arfgap and ank repeat domain of acap1
7c2b0oF_



99.7 26 PDB header:metal binding protein
Chain: F: PDB Molecule:uplc1;
PDBTitle: crystal structure of uplc1 gap domain
8c3lvrE_



99.7 22 PDB header:protein transport
Chain: E: PDB Molecule:arf-gap with sh3 domain, ank repeat and ph domain-
PDBTitle: the crystal structure of asap3 in complex with arf6 in transition2 state soaked with calcium
9d1s70b_



99.7 45 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
10c3ui2A_



99.7 20 PDB header:transport protein
Chain: A: PDB Molecule:signal recognition particle 43 kda protein, chloroplastic;
PDBTitle: crystal structure of the cpsrp54 tail bound to cpsrp43
11c1dcqA_



99.6 21 PDB header:metal binding protein
Chain: A: PDB Molecule:pyk2-associated protein beta;
PDBTitle: crystal structure of the arf-gap domain and ankyrin repeats2 of papbeta.
12c3keaB_



99.6 19 PDB header:viral protein
Chain: B: PDB Molecule:k1l;
PDBTitle: structure function studies of vaccinia virus host-range protein k12 reveal a novel ankyrin repeat interaction surface for k1s function
13c3utmA_



99.6 24 PDB header:transferase/signaling protein
Chain: A: PDB Molecule:tankyrase-1;
PDBTitle: crystal structure of a mouse tankyrase-axin complex
14d2ajaa1



99.6 16 Fold:alpha-alpha superhelix
Superfamily:Pseudo ankyrin repeat-like
Family:Pseudo ankyrin repeat
15d1dcqa1



99.6 25 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
16c2fo1E_



99.6 21 PDB header:gene regulation/signalling protein/dna
Chain: E: PDB Molecule:lin-12 protein;
PDBTitle: crystal structure of the csl-notch-mastermind ternary2 complex bound to dna
17c2ajaA_



99.6 15 PDB header:protein binding
Chain: A: PDB Molecule:ankyrin repeat family protein;
PDBTitle: x-ray structure of an ankyrin repeat family protein q5zsv02 from legionella pneumophila. northeast structural genomics3 consortium target lgr21.
18d2fo1e1



99.6 20 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
19c3ljnA_



99.5 24 PDB header:unknown function
Chain: A: PDB Molecule:hypothetical protein;
PDBTitle: ankyrin repeat protein from leishmania major
20c2rfaA_



99.5 36 PDB header:membrane protein
Chain: A: PDB Molecule:transient receptor potential cation channel subfamily v
PDBTitle: crystal structure of the mouse trpv6 ankyrin repeat domain
21c2zgdA_



not modelled 99.5 30 PDB header:de novo protein
Chain: A: PDB Molecule:3 repeat synthetic ankyrin;
PDBTitle: asn-hydroxylation stabilises the ankyrin repeat domain fold
22d1ycsb2



not modelled 99.5 100 Fold:SH3-like barrel
Superfamily:SH3-domain
Family:SH3-domain
23c1sw6A_



not modelled 99.5 18 PDB header:transcription regulation
Chain: A: PDB Molecule:regulatory protein swi6;
PDBTitle: s. cerevisiae swi6 ankyrin-repeat fragment
24d1sw6a_



not modelled 99.5 18 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
25d1uoha_



not modelled 99.5 47 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
26c2xenA_



not modelled 99.5 29 PDB header:de novo protein
Chain: A: PDB Molecule:ni1c mut4;
PDBTitle: structural determinants for improved thermal stability of2 designed ankyrin repeat proteins with a redesigned c-3 capping module.
27c3hraA_



not modelled 99.5 34 PDB header:structural protein
Chain: A: PDB Molecule:ankyrin repeat family protein;
PDBTitle: crystal structure of ef0377 an ankyrin repeat protein
28c3deoA_



not modelled 99.5 25 PDB header:protein transport, membrane protein
Chain: A: PDB Molecule:signal recognition particle 43 kda protein;
PDBTitle: structural basis for specific substrate recognition by the2 chloroplast signal recognition particle protein cpsrp43
29d1wdya_



not modelled 99.4 24 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
30c3ehrB_



not modelled 99.4 24 PDB header:signaling protein
Chain: B: PDB Molecule:osteoclast-stimulating factor 1;
PDBTitle: crystal structure of human osteoclast stimulating factor
31c2f8xK_



not modelled 99.4 18 PDB header:transcription/dna
Chain: K: PDB Molecule:neurogenic locus notch homolog protein 1;
PDBTitle: crystal structure of activated notch, csl and maml on hes-12 promoter dna sequence
32c2kbxA_



not modelled 99.4 23 PDB header:cell adhesion
Chain: A: PDB Molecule:integrin-linked protein kinase;
PDBTitle: solution structure of ilk-pinch complex
33c1n0qB_



not modelled 99.4 41 PDB header:structural protein
Chain: B: PDB Molecule:3 ankyrin repeats;
PDBTitle: 3ank: a designed ankyrin repeat protein with three identical consensus2 repeats
34c2xaiD_



not modelled 99.4 27 PDB header:transcription
Chain: D: PDB Molecule:ankyrin repeat and socs box protein 9;
PDBTitle: crystal structure of ankyrin repeat and socs box-containing2 protein 9 (asb9) in complex with elonginb and elonginc
35d1iknd_



not modelled 99.4 21 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
36c3eu9B_



not modelled 99.4 25 PDB header:protein binding, methyl-lysine-binding p
Chain: B: PDB Molecule:huntingtin-interacting protein 14;
PDBTitle: the ankyrin repeat domain of huntingtin interacting protein 14
37d1ot8a_



not modelled 99.4 18 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
38c3b7bB_



not modelled 99.3 36 PDB header:transferase
Chain: B: PDB Molecule:euchromatic histone-lysine n-methyltransferase 1;
PDBTitle: euhmt1 (glp) ankyrin repeat domain (structure 1)
39c3d9hA_



not modelled 99.3 27 PDB header:structural protein, protein binding
Chain: A: PDB Molecule:cdna flj77766, highly similar to homo sapiens
PDBTitle: crystal structure of the splice variant of human asb92 (hasb9-2), an ankyrin repeat protein
40c3t8kB_



not modelled 99.3 13 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: the crystal structure of a functionally unknown protein lebu_0176 from2 leptotrichia buccalis c-1013-b
41c3jxiA_



not modelled 99.3 22 PDB header:membrane protein
Chain: A: PDB Molecule:vanilloid receptor-related osmotically activated channel
PDBTitle: crystal structure of the chicken trpv4 ankyrin repeat domain
42d1ixva_



not modelled 99.3 35 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
43d1blxb_



not modelled 99.3 30 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
44c3v30A_



not modelled 99.3 28 PDB header:protein binding
Chain: A: PDB Molecule:dna-binding protein rfxank;
PDBTitle: crystal structure of the peptide bound complex of the ankyrin repeat2 domains of human rfxank
45c2f37B_



not modelled 99.3 24 PDB header:membrane protein
Chain: B: PDB Molecule:transient receptor potential cation channel
PDBTitle: crystal structure of the ankyrin repeat domain of human2 trpv2
46c1oy3D_



not modelled 99.3 24 PDB header:dna binding protein
Chain: D: PDB Molecule:transcription factor inhibitor i-kappa-b-beta;
PDBTitle: crystal structure of an ikbbeta/nf-kb p65 homodimer complex
47d1oy3d_



not modelled 99.3 24 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
48c2rfmB_



not modelled 99.3 33 PDB header:protein binding
Chain: B: PDB Molecule:putative ankyrin repeat protein tv1425;
PDBTitle: structure of a thermophilic ankyrin repeat protein
49d1k1aa_



not modelled 99.3 22 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
50d1bi7b_



not modelled 99.3 24 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
51c1n0rA_



not modelled 99.3 66 PDB header:structural protein
Chain: A: PDB Molecule:4 ankyrin repeats;
PDBTitle: 4ank: a designed ankyrin repeat protein with four identical2 consensus repeats
52c2v5qC_



not modelled 99.3 41 PDB header:transferase
Chain: C: PDB Molecule:design ankyrin repeat protein;
PDBTitle: crystal structure of wild-type plk-1 kinase domain in2 complex with a selective darpin
53d2a5ea_



not modelled 99.2 21 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
54c2jabC_



not modelled 99.2 30 PDB header:de novo protein
Chain: C: PDB Molecule:h10-2-g3;
PDBTitle: a designed ankyrin repeat protein evolved to picomolar2 affinity to her2
55d1ihba_



not modelled 99.2 32 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
56c2l6bA_



not modelled 99.2 32 PDB header:de novo protein
Chain: A: PDB Molecule:nr1c;
PDBTitle: nrc consensus ankyrin repeat protein solution structure
57d1awcb_



not modelled 99.2 24 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
58c1ympB_



not modelled 99.2 22 PDB header:transcription
Chain: B: PDB Molecule:notch 1 protein;
PDBTitle: the crystal structure of a partial mouse notch-1 ankyrin2 domain: repeats 4 through 7 preserve an ankyrin fold
59c3twtD_



not modelled 99.2 28 PDB header:signaling protein/peptide
Chain: D: PDB Molecule:tankyrase-2;
PDBTitle: crystal structure of arc4 from human tankyrase 2 in complex with2 peptide from human mcl1 (chimeric peptide)
60c3nmzD_



not modelled 99.2 36 PDB header:cell adhesion/cell cycle
Chain: D: PDB Molecule:rho guanine nucleotide exchange factor 4;
PDBTitle: crytal structure of apc complexed with asef
61d1myoa_



not modelled 99.2 28 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
62c1ympA_



not modelled 99.2 22 PDB header:transcription
Chain: A: PDB Molecule:notch 1 protein;
PDBTitle: the crystal structure of a partial mouse notch-1 ankyrin2 domain: repeats 4 through 7 preserve an ankyrin fold
63d1bd8a_



not modelled 99.1 32 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
64c2nyjA_



not modelled 99.1 17 PDB header:transport protein
Chain: A: PDB Molecule:transient receptor potential cation channel
PDBTitle: crystal structure of the ankyrin repeat domain of trpv1
65c1wyxA_



not modelled 99.1 29 PDB header:cell adhesion
Chain: A: PDB Molecule:crk-associated substrate;
PDBTitle: the crystal structure of the p130cas sh3 domain at 1.1 a2 resolution
66c2kymA_



not modelled 99.1 27 PDB header:signaling protein
Chain: A: PDB Molecule:bud emergence protein 1;
PDBTitle: solution structure of the bem1p sh3-ci domain from l.elongisporus in2 complex with ste20p peptide
67d1ug1a_



not modelled 99.1 19 Fold:SH3-like barrel
Superfamily:SH3-domain
Family:SH3-domain
68c2dnuA_



not modelled 99.1 29 PDB header:structural genomics, structural protein
Chain: A: PDB Molecule:sh3 multiple domains 1;
PDBTitle: solution structure of rsgi ruh-061, a sh3 domain from human
69c1griA_



not modelled 99.1 34 PDB header:signal transduction adaptor
Chain: A: PDB Molecule:growth factor bound protein 2;
PDBTitle: grb2
70c2yupA_



not modelled 99.1 21 PDB header:cell adhesion
Chain: A: PDB Molecule:vinexin;
PDBTitle: solution structure of the second sh3 domain of human vinexin
71c2jxbA_



not modelled 99.1 35 PDB header:signaling protein complex
Chain: A: PDB Molecule:t-cell surface glycoprotein cd3 epsilon chain,
PDBTitle: structure of cd3epsilon-nck2 first sh3 domain complex
72c2egeA_



not modelled 99.1 32 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein kiaa1666;
PDBTitle: solution structure of the third sh3 domain from human2 kiaa1666 protein
73d1ng2a2



not modelled 99.1 33 Fold:SH3-like barrel
Superfamily:SH3-domain
Family:SH3-domain
74c2ysqA_



not modelled 99.1 28 PDB header:signaling protein
Chain: A: PDB Molecule:rho guanine nucleotide exchange factor 9;
PDBTitle: solution structure of the sh3 domain from rho guanine2 nucleotide exchange factor 9
75d1i1ja_



not modelled 99.1 20 Fold:SH3-like barrel
Superfamily:SH3-domain
Family:SH3-domain
76c1u3oA_



not modelled 99.1 28 PDB header:signaling protein
Chain: A: PDB Molecule:huntingtin-associated protein-interacting
PDBTitle: solution structure of rat kalirin n-terminal sh3 domain
77c2i0nA_



not modelled 99.1 32 PDB header:structural protein
Chain: A: PDB Molecule:class vii unconventional myosin;
PDBTitle: structure of dictyostelium discoideum myosin vii sh3 domain2 with adjacent proline rich region
78d1k9aa1



not modelled 99.1 22 Fold:SH3-like barrel
Superfamily:SH3-domain
Family:SH3-domain
79c2d8hA_



not modelled 99.1 28 PDB header:unknown function
Chain: A: PDB Molecule:sh3yl1 protein;
PDBTitle: solution structure of the sh3 domain of hypothetical2 protein sh3yl1
80c2yunA_



not modelled 99.1 31 PDB header:protein transport
Chain: A: PDB Molecule:nostrin;
PDBTitle: solution structure of the sh3 domain of human nostrin
81c2creA_



not modelled 99.0 31 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hef-like protein;
PDBTitle: solution structure of rsgi ruh-036, an sh3 domain from2 human cdna
82c2k2mA_



not modelled 99.0 31 PDB header:signaling protein
Chain: A: PDB Molecule:eps8-like protein 1;
PDBTitle: structural basis of pxxdy motif recognition in sh3 binding
83c1w70A_



not modelled 99.0 21 PDB header:sh3 domain
Chain: A: PDB Molecule:neutrophil cytosol factor 4;
PDBTitle: sh3 domain of p40phox complexed with c-terminal polyproline2 region of p47phox
84c2azsA_



not modelled 99.0 30 PDB header:signaling protein
Chain: A: PDB Molecule:sh2-sh3 adapter protein drk;
PDBTitle: nmr structure of the n-terminal sh3 domain of drk2 (calculated without noe restraints)
85c2ct4A_



not modelled 99.0 26 PDB header:signaling protein
Chain: A: PDB Molecule:cdc42-interacting protein 4;
PDBTitle: solution strutcure of the sh3 domain of the cdc42-2 interacting protein 4
86c1x2pA_



not modelled 99.0 24 PDB header:transferase
Chain: A: PDB Molecule:protein arginine n-methyltransferase 2;
PDBTitle: solution structure of the sh3 domain of the protein2 arginine n-methyltransferase 2
87c2a28D_



not modelled 99.0 31 PDB header:signaling protein
Chain: D: PDB Molecule:bzz1 protein;
PDBTitle: atomic-resolution crystal structure of the second sh32 domain of yeast bzz1 determined from a pseudomerohedrally3 twinned crystal
88c2ekhA_



not modelled 99.0 23 PDB header:signaling protein
Chain: A: PDB Molecule:sh3 and px domain-containing protein 2a;
PDBTitle: solution structures of the sh3 domain of human kiaa0418
89d1uffa_



not modelled 99.0 24 Fold:SH3-like barrel
Superfamily:SH3-domain
Family:SH3-domain
90c1wx6A_



not modelled 99.0 28 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:cytoplasmic protein nck2;
PDBTitle: solution structure of the sh3 domain of the human2 cytoplasmic protein nck2
91c1x2qA_



not modelled 99.0 25 PDB header:signaling protein
Chain: A: PDB Molecule:signal transducing adapter molecule 2;
PDBTitle: solution structure of the sh3 domain of the signal2 transducing adaptor molecule 2
92c2eywA_



not modelled 99.0 34 PDB header:signaling protein
Chain: A: PDB Molecule:v-crk sarcoma virus ct10 oncogene homolog
PDBTitle: n-terminal sh3 domain of ct10-regulated kinase
93d1ov3a2



not modelled 99.0 34 Fold:SH3-like barrel
Superfamily:SH3-domain
Family:SH3-domain
94c2dl5A_



not modelled 99.0 29 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:kiaa0769 protein;
PDBTitle: solution structure of the first sh3 domain of human2 kiaa0769 protein
95d1gbra_



not modelled 99.0 35 Fold:SH3-like barrel
Superfamily:SH3-domain
Family:SH3-domain
96c2xmfA_



not modelled 99.0 33 PDB header:motor protein
Chain: A: PDB Molecule:myosin 1e sh3;
PDBTitle: myosin 1e sh3
97c3c5rB_



not modelled 99.0 28 PDB header:protein binding
Chain: B: PDB Molecule:brca1-associated ring domain protein 1;
PDBTitle: crystal structure of the bard1 ankyrin repeat domain and its2 functional consequences
98c2csqA_



not modelled 99.0 31 PDB header:endocytosis/exocytosis
Chain: A: PDB Molecule:rim binding protein 2;
PDBTitle: solution structure of the second sh3 domain of human rim-2 binding protein 2
99c1x6gA_



not modelled 99.0 20 PDB header:signaling protein
Chain: A: PDB Molecule:megakaryocyte-associated tyrosine-protein kinase;
PDBTitle: solution structures of the sh3 domain of human2 megakaryocyte-associated tyrosine-protein kinase.
100c2dl7A_



not modelled 99.0 33 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:kiaa0769 protein;
PDBTitle: solution structure of the second sh3 domain of human2 kiaa0769 protein
101c1mv3A_



not modelled 99.0 30 PDB header:endocytosis/exocytosis
Chain: A: PDB Molecule:myc box dependent interacting protein 1;
PDBTitle: nmr structure of the tumor suppressor bin1: alternative2 splicing in melanoma and interaction with c-myc
102d1udla_



not modelled 99.0 26 Fold:SH3-like barrel
Superfamily:SH3-domain
Family:SH3-domain
103c2dl8A_



not modelled 99.0 27 PDB header:signaling protein
Chain: A: PDB Molecule:slit-robo rho gtpase-activating protein 2;
PDBTitle: solution structure of the sh3 domain of human slit-robo rho2 gtpase-activating protein 2
104c2yuoA_



not modelled 99.0 33 PDB header:signaling protein
Chain: A: PDB Molecule:run and tbc1 domain containing 3;
PDBTitle: solution structure of the sh3 domain of mouse run and tbc12 domain containing 3
105c2l0aA_



not modelled 99.0 30 PDB header:signaling protein
Chain: A: PDB Molecule:signal transducing adapter molecule 1;
PDBTitle: solution nmr structure of signal transducing adapter molecule 1 stam-12 from homo sapiens, northeast structural genomics consortium target3 hr4479e
106d1uhca_



not modelled 99.0 28 Fold:SH3-like barrel
Superfamily:SH3-domain
Family:SH3-domain
107d1uuea_



not modelled 99.0 31 Fold:SH3-like barrel
Superfamily:SH3-domain
Family:SH3-domain
108c2cubA_



not modelled 99.0 22 PDB header:signaling protein
Chain: A: PDB Molecule:cytoplasmic protein nck1;
PDBTitle: solution structure of the sh3 domain of the human2 cytoplasmic protein nck1
109c2cudA_



not modelled 99.0 24 PDB header:signaling protein
Chain: A: PDB Molecule:src-like-adapter;
PDBTitle: solution structure of the sh3 domain of the human src-like2 adopter protein (slap)
110d1e6ga_



not modelled 99.0 31 Fold:SH3-like barrel
Superfamily:SH3-domain
Family:SH3-domain
111c2dmoA_



not modelled 99.0 26 PDB header:signaling protein
Chain: A: PDB Molecule:neutrophil cytosol factor 2;
PDBTitle: refined solution structure of the 1st sh3 domain from human2 neutrophil cytosol factor 2 (ncf-2)
112d1k4us_



not modelled 99.0 31 Fold:SH3-like barrel
Superfamily:SH3-domain
Family:SH3-domain
113d1uj0a_



not modelled 99.0 32 Fold:SH3-like barrel
Superfamily:SH3-domain
Family:SH3-domain
114c2rqrA_



not modelled 99.0 17 PDB header:protein binding
Chain: A: PDB Molecule:engulfment and cell motility protein 1, linker, dedicator
PDBTitle: the solution structure of human dock2 sh3 domain - elmo1 peptide2 chimera complex
115d1j3ta_



not modelled 99.0 23 Fold:SH3-like barrel
Superfamily:SH3-domain
Family:SH3-domain
116c2yt6A_



not modelled 99.0 33 PDB header:cell cycle
Chain: A: PDB Molecule:adult male urinary bladder cdna, riken full-
PDBTitle: solution structure of the sh3_1 domain of yamaguchi sarcoma2 viral (v-yes) oncogene homolog 1
117c1x43A_



not modelled 99.0 24 PDB header:endocytosis/exocytosis
Chain: A: PDB Molecule:sh3 domain grb2-like protein b1;
PDBTitle: solution structure of the sh3 domain of endophilin b12 (sh3g1b1)
118c1zlmA_



not modelled 99.0 35 PDB header:signaling protein
Chain: A: PDB Molecule:osteoclast stimulating factor 1;
PDBTitle: crystal structure of the sh3 domain of human osteoclast2 stimulating factor
119d1pwta_



not modelled 99.0 35 Fold:SH3-like barrel
Superfamily:SH3-domain
Family:SH3-domain
120c3nhnA_



not modelled 99.0 39 PDB header:transferase
Chain: A: PDB Molecule:tyrosine-protein kinase hck;
PDBTitle: crystal structure of the src-family kinase hck sh3-sh2-linker2 regulatory region

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite