Return to main results Retrieve Phyre Job Id

Job DescriptionQ13625
Confidence83.30%DateWed Jun 6 09:54:47 BST 2012
Rank341Aligned Residues109
% Identity16%Templatec2v66C_
PDB info PDB header:structural proteinChain: C: PDB Molecule:nuclear distribution protein nude-like 1; PDBTitle: crystal structure of the coiled-coil domain of ndel1 (a.a.2 58 to 169)c
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   190.........200.........210.........220.........230.........240.........250.........260.........
Predicted Secondary structure 
Query SS confidence 















































































Query Sequence  LKKVRALKGHVEQKRLSNGKLVEEIEQMNNLFQQKQRELVLAVSKVEELTRQLEMLKNGRIDSHHDNQSAVAELDRLYKE
Query Conservation        
             
                
          
   

 
                
   
  
Alig confidence 















































































Template Conservation 
     
      
  


            
      
      
      
     

     

             
Template Sequence  EQRNRDLQADNQRLKYEVEALKEKLEHQYAQSYKQVSVLEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRATIVSLED
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 















































































   5960.........70.........80.........90.........100.........110.........120.........130........
 
   270.........280.........290........
Predicted Secondary structure 
Query SS confidence 




























Query Sequence  LQLRNKLNQEQNAKLQQQRECLNKRNSEV
Query Conservation                       
     
 
Alig confidence 




























Template Conservation   
       
    

 

 
 
 
    
Template Sequence  FEQRLNQAIERNAFLESELDEKESLLVSV
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 




























   139140.........150.........160.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions