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Job DescriptionQ13625
Confidence97.72%DateWed Jun 6 09:54:47 BST 2012
Rank279Aligned Residues251
% Identity11%Templatec1g8xB_
PDB info PDB header:structural proteinChain: B: PDB Molecule:myosin ii heavy chain fused to alpha-actinin 3; PDBTitle: structure of a genetically engineered molecular motor
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31........40.........50.........60.........70 .........80.........90.........100.....
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Query Sequence  VVDLCKEPGESDCHLAEVWCGSERPVADNERMFDVLQRFG. . . . . SQRNEVRFFLRHERPPGRDIVSGPRSQDPSLKRNG
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Template Sequence  LARIEEAREQRLGSEQTKSDYLKRANELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKKTEKPPKGQEVSELEAIY
Template Known Secondary structure  T




SSTTTT
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   751........760.........770.........780.........790.........800.........810.........820.........830
 
   106...110.........120.........130.........140.........150.........160.........170.........180.....
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Query Sequence  VKVPGEYRRKENGVNSPRMDLTLAELQEMASRQQQQIEAQQQLLATKEQRLKFLKQQDQRQQQQVAEQEKLKRLKEIAEN
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Template Sequence  NSLQTKLRLIKREPFVAPAGLTPNEIDSTWSALEKAEQEHAEALRIELKRQKKIAVLLQKYNRILKKLENWATTKSVYLG
Template Known Secondary structure  TTS





TT
STGGGTGGG
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   831........840.........850.........860.........870.........880.........890.........900.........910
 
   186...190.........200.........210.........220.........230.. .......240.........250.........260...
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Query Sequence  QEAKLKKVRALKGHVEQKRLSNGKLVEEIEQMNNLFQQKQRELVLAV. . SKVEELTRQLEMLKNGRIDSHHDNQSAVAEL
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Template Sequence  SNETGDSITAVQAKLKNLEAFDGECQSLEGQSNSDLLSILAQLTELNYNGVPELTERKDTFFAQQWTGVKSSAETYKNTL
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STTTTTTTT
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   911........920.........930.........940.........950.........960.........970.........980.........990
 
   264.....270.........280.
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Query Sequence  DRLYKELQLRNKLNQEQN
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Template Sequence  LAELERLQKIEDLHHHHH
Template Known Secondary structure  SGGGG
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   991........1000........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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