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Job DescriptionQ13625
Confidence97.06%DateWed Jun 6 09:54:47 BST 2012
Rank292Aligned Residues162
% Identity9%Templatec1bg1A_
PDB info PDB header:transcription/dnaChain: A: PDB Molecule:protein (transcription factor stat3b); PDBTitle: transcription factor stat3b/dna complex
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   133......140.........150.........160.........170...... ...180.........190.........200......
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Query Sequence  EMASRQQQQIEAQQQLLATKEQRLKFLKQQDQRQQQQVAEQEKL. . . . . . KRLKEIAENQEAKLKKVRALKGHVEQKRLS
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Template Sequence  EKQQMLEQHLQDVRKRVQDLEQKMKVVENLQDDFDFNYKTLKSQGDSVTRQKMQQLEQMLTALDQMRRSIVSELAGLLSA
Template Known Secondary structure  TT




TT
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   139140.........150.........160.........170.........180.........190.........200.........210........
 
   207..210.........220.........230.........240.........250.........260.........270.........280......
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Query Sequence  NGKLVEEIEQMNNLFQQKQRELVLAVSKVEELTRQLEMLKNGRIDSHHDNQSAVAELDRLYKELQLRNKLNQEQNAKLQQ
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Template Sequence  MEYVQKTLTDEELADWKRRQQIACIGGPPNICLDRLENWITSLAESQLQTRQQIKKLEELQQKVSYKGDPIVQHRPMLEE
Template Known Secondary structure  TTT






S

TT
TTTTT
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   228.230.........240.........250.........260.........270.........280.........290.........300.......
 
   287..290....
Predicted Secondary structure 
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Query Sequence  QRECLNKR
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Template Conservation     

   
Template Sequence  RIVELFRN
Template Known Secondary structure 
Template Predicted Secondary structure 
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   308.310.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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