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Job Description | Q13625 | Confidence | 99.31% | Date | Wed Jun 6 09:54:47 BST 2012 |
Rank | 41 | Aligned Residues | 90 |
% Identity | 22% | Template | c3jxiA_ |
PDB info |
PDB header:membrane protein | Chain: A: PDB Molecule:vanilloid receptor-related osmotically activated channel |
PDBTitle: crystal structure of the chicken trpv4 ankyrin repeat domain
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Resolution | 2.30 Å |
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921 | . | . | . | . | . | . | . | . | 930 | . | . | . | . | . | . | . | . | . | 940 | . | . | . | . | . | . | . | . | . | |
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950 | . | . | . | . | . | . | . | . | . | 960 | . | . | . | . | . | |
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. | . | . | . | 970 | . | . | . | . | . | . | . | . | . | 980 | . |
Predicted Secondary structure |   |
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Query Sequence |   |
R | V | K | F | N | P | L | A | L | L | L | D | S | S | L | E | G | E | F | D | L | V | Q | R | I | I | Y | E | V | . |
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A | V | C | A | G | H | T | E | I | V | K | F | L | V | Q | F |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
Y | F | G | E | L | P | L | S | L | . |
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A | A | C | T | N | Q | P | H | I | V | H | Y | L | T | E | N | G | H | K | Q | A | D | L | R | R | Q | D | S | R | G | N | T | V | L | H | A | L | V | A | I | A | D | N | T | R | E | N | T | K | F | V | T | K | M | Y | D | L | L | L | I | K | C | A | K | L | F | P | D |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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269 | 270 | . | . | . | . | . | . | . | |
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. | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . |
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982 | . | . | . | . | . | . | . | 990 | . | . | . | . | . | . | . | . | . | 1000 | . | . | . | . | . | . | . | . | . | 1010 | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
G | V | N | V | N | A | A | D | S | D | G | W | T | P | L | H | C | A | A | S | C | N | N | V | Q | V | C | K | F | L | V | E |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
T | N | L | E | A | L | L | N | N | D | G | L | S | P | L | M | M | A | A | K | T | G | K | I | G | I | F | Q | H | I | I | R |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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346 | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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