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Job DescriptionQ13625
Confidence99.18%DateWed Jun 6 09:54:47 BST 2012
Rank58Aligned Residues86
% Identity22%Templatec1ympB_
PDB info PDB header:transcriptionChain: B: PDB Molecule:notch 1 protein; PDBTitle: the crystal structure of a partial mouse notch-1 ankyrin2 domain: repeats 4 through 7 preserve an ankyrin fold
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   923......930.........940........ .950.........960.........
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Query Sequence  KFNPLALLLDSSLEGEFDLVQRIIYE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . VDDPSLPNDEGITALHNAVCA
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Template Sequence  GTTPLIL. . . AARLALEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNKEETPLFLAARE
Template Known Secondary structure  S

...T
TT

TT


TTS

TT
TT

TT


TT


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   118.120.... .....130.........140.........150.........160.........170.........180.........190....
 
   970.........980.........990.........1000.........1010.
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Query Sequence  GHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFL
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Template Sequence  GSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLL
Template Known Secondary structure  T
TT

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TT
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   195....200.........210.........220.........230......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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