Return to main results Retrieve Phyre Job Id

Job DescriptionQ13625
Confidence57.05%DateWed Jun 6 09:54:47 BST 2012
Rank384Aligned Residues99
% Identity20%Templatec2no2A_
PDB info PDB header:cell adhesionChain: A: PDB Molecule:huntingtin-interacting protein 1; PDBTitle: crystal structure of the dllrkn-containing coiled-coil2 domain of huntingtin-interacting protein 1
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   128.130.........140.........150.........160.........170.........180.........190.........200.......
Predicted Secondary structure 
Query SS confidence 















































































Query Sequence  LAELQEMASRQQQQIEAQQQLLATKEQRLKFLKQQDQRQQQQVAEQEKLKRLKEIAENQEAKLKKVRALKGHVEQKRLSN
Query Conservation    

                     
     
                                    
           
Alig confidence 













































...................














Template Conservation   


 

  

  
    
  
 

     

    
         ...................
     
 
    

Template Sequence  HADLLRKNAEVTKQVSMARQAQVDLEREKKELEDSLERISDQGQRK. . . . . . . . . . . . . . . . . . . TQEQLEVLESLKQEL
Template Known Secondary structure  ...................
Template Predicted Secondary structure  ...................
Template SS confidence 















































































   482.......490.........500.........510.........520....... ..530.........540..
 
   208.210.........220.........230.........240.....
Predicted Secondary structure 
Query SS confidence 





































Query Sequence  GKLVEEIEQMNNLFQQKQRELVLAVSKVEELTRQLEML
Query Conservation    
                
          
   

 
Alig confidence 





































Template Conservation       
      

        

   
  
  
   
Template Sequence  ATSQRELQVLQGSLETSAQSEANWAAEFAELEKERDSL
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 





































   543......550.........560.........570.........580
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions