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Job DescriptionQ13625
Confidence99.68%DateWed Jun 6 09:54:47 BST 2012
Rank8Aligned Residues147
% Identity22%Templatec3lvrE_
PDB info PDB header:protein transportChain: E: PDB Molecule:arf-gap with sh3 domain, ank repeat and ph domain- PDBTitle: the crystal structure of asap3 in complex with arf6 in transition2 state soaked with calcium
Resolution3.38 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   926...930.........940.........950.........960.........970.........980.........990.........1000.....
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Query Sequence  PLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNV
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Template Sequence  VLHLAVKVANQASLPLVDFIIQNGGHLD. AKADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHK
Template Known Secondary structure  T

TTTT

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TT
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TT


TT
T
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   589590.........600.........610...... ...620.........630.........640.........650.........660.......
 
   1006...1010.........1020... ......1030.........1040.........1050..... ....1060.........
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Query Sequence  QVCKFLVESGAAVFAMTY. . . SDMQTAADKCEEMEEGYTQCSQFLYGVQEKMG. . . . . . . . . . . . . IMNKGVIYALWDYE
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Template Sequence  ECEELLEQAQANKEMRILMLGLDA. . . . . . . . . . . . . . AGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVG
Template Known Secondary structure  TT




STT..............SSSS






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   669670.........680.........690.. .......700.........710.........720.........730....
 
   1070... ......1080.......
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Query Sequence  PQND. . . . DELPMKEGDCMTII
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Template Sequence  GQDKIRPLWRHYYTGTQGLIFV
Template Known Secondary structure 

GGGSTTGGGGTTT

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   66...70.........80.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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