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Job Description | Q13625 | Confidence | 80.84% | Date | Wed Jun 6 09:54:47 BST 2012 |
Rank | 344 | Aligned Residues | 104 |
% Identity | 20% | Template | c3mkqB_ |
PDB info |
PDB header:transport protein | Chain: B: PDB Molecule:coatomer subunit alpha; |
PDBTitle: crystal structure of yeast alpha/betaprime-cop subcomplex of the copi2 vesicular coat
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Resolution | 2.50 Å |
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931 | . | . | . | . | . | |
. | . | . | 940 | . | . | . | . | . | . | . | . | . | 950 | . | . | . | . | . | . | . | . | . | 960 | . | . | . | . | . | . | . | . | |
. | 970 | . | . | . | . | . | . | . | . | . | 980 | . | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
L | D | S | S | L | E | . |
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Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
F | D | L | A | L | E | Y | G | N | L | D | A | A | L | D | E | A | K | K | L | N | D | S | I | T | . |
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W | E | R | L | I | Q | E | A | L | A | Q | G | N | A | S | L | A | E | M | I | Y | Q | T | Q | H | S | F | D | K | L | S | F | L | Y | L | V | T | G | D | V | N | K | L | S | K | M | Q | N | I | A |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
653 | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | |
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. | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . | . | . | . | . | . | . |
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988 | . | 990 | . | . | . | . | . | . | . | . | . | 1000 | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
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A | D | S | D | G | W | T | P | L | H | C | A | A | S | C | N | N | V | Q | . |
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A | A | V | F | A | M | T | Y | S | D | M | Q | T | A | A | D | K | C | E | E | M | E | E | G |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
Q | T | R | E | D | F | G | S | M | L | L | N | T | F | Y | N | N | S | T | K | E | R | S | S | I | F | A | E | G | G | S | L | P | L | A | Y | A | V | A | K | A | N | G | D | E | A | A | A | S | A | F | L | E | Q | A | E | V | D |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
728 | . | 730 | . | . | . | . | . | . | . | . | . | 740 | . | . | . | . | . | . | . | . | . | 750 | . | . | . | . | . | . | . | . | . | 760 | . | . | . | . | . | . | . | . | . | 770 | . | . | . | . | . | . | . | . | . | 780 | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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