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Job DescriptionQ13625
Confidence99.66%DateWed Jun 6 09:54:47 BST 2012
Rank9Aligned Residues135
% Identity45%Templated1s70b_
SCOP infobeta-hairpin-alpha-hairpin repeat Ankyrin repeat Ankyrin repeat
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   917..920.........930.........940.........950.........960.........970...
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Query Sequence  AHGMRVKFNPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTE. . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  RKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPL
Template Known Secondary structure 
S






T



TT
B
TT

BTT
TT

TT


TTS

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   31........40.........50.........60.........70.........80.........90.........100.........110
 
  
Predicted Secondary structure  ................................................................................
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ................................................................................
Template Conservation                                                 
                                
Template Sequence  HAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHI
Template Known Secondary structure  T
TT

TT


TTS



ST

T

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   111........120.........130.........140.........150.........160.........170.........180.........190
 
   974.....980.........990.........1000.........1010.........1020.........1030
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . IVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAA
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Template Sequence  NDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVN. KVGQTAF
Template Known Secondary structure 




TTT


T
TTT

TT


TT


TT
TT

TT


.TTS

TT
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   191........200.........210.........220.........230.........240.........250.........260.. .......
 
   1031........1040.........1050........
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Query Sequence  DKCEEMEEGYTQCSQFLYGVQEKMGIMN
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Template Conservation    
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Template Sequence  DVADE. . . . . . DILGYLEELQKKQNLLH
Template Known Secondary structure  TS

S......GGGTTS

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   270.... .....280.........290.
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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