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Job DescriptionQ13625
Confidence99.30%DateWed Jun 6 09:54:47 BST 2012
Rank45Aligned Residues85
% Identity24%Templatec2f37B_
PDB info PDB header:membrane proteinChain: B: PDB Molecule:transient receptor potential cation channel PDBTitle: crystal structure of the ankyrin repeat domain of human2 trpv2
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   929930.........940.........950....
Predicted Secondary structure 








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Query Sequence  LLLDSSLEGEFDLVQRIIYEVDDPSL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Conservation   
  
           

                             
                                
Template Sequence  ALHIAIEKRSLQCVKLLVENGANVHARACGRFFQKGQGTCFYFGELPLSLAACTKQWDVVSYLLENPHQPASLQATDSQG
Template Known Secondary structure  TT
TT

TT



SGGG
TTSSSS

S
SSTT

SS



TT


TTS
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   166...170.........180.........190.........200.........210.........220.........230.........240.....
 
   955....960.........970.........980.........990.........1000.........1010...
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Query Sequence  . . . . . . . . . . . PNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVE
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Template Sequence  NTVLHALVXISDNSAENIALVTSXYDGLLQAGARLCPTVQLEDIRNLQDLTPLKLAAKEGKIEIFRHILQ
Template Known Secondary structure 



S
STT

GGG


TTS

TT
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   246...250.........260.........270.........280.........290.........300.........310.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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