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Job DescriptionQ13625
Confidence96.72%DateWed Jun 6 09:54:47 BST 2012
Rank298Aligned Residues152
% Identity11%Templatec2efrB_
PDB info PDB header:contractile proteinChain: B: PDB Molecule:general control protein gcn4 and tropomyosin 1 alpha chain; PDBTitle: crystal structure of the c-terminal tropomyosin fragment with n- and2 c-terminal extensions of the leucine zipper at 1.8 angstroms3 resolution
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   114.....120.........130.........140.........150.........160.........170.........180.........190...
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Query Sequence  RKENGVNSPRMDLTLAELQEMASRQQQQIEAQQQLLATKEQRLKFLKQQDQRQQQQVAEQEKLKRLKEIAENQEAKLKKV
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Template Sequence  MKQLEDKVEELLSKNYHLENEVARLKKLLERAEERAELSEGKSAELEEELKTVTNNLKSLE. . AQAEKYSQKEDKYEEEI
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   148.150.........160.........170.........180.........190.........200........ .210.........220.....
 
   194.....200.........210.........220.........230.........240.........250.........260.......
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Query Sequence  RALKGHVEQKRLSNGKLVEEIEQMNNLFQQKQRELVLAVSKVEELTRQLEMLKNGRIDSHHDNQSAVAELDRLY
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Template Sequence  KVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEEMKQLEDKVEELLSKNYHLENEVARLK
Template Known Secondary structure  T
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   226...230.........240.........250.........260.........270.........280.........290.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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