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Job Description | Q13625 | Confidence | 99.16% | Date | Wed Jun 6 09:54:47 BST 2012 |
Rank | 62 | Aligned Residues | 86 |
% Identity | 22% | Template | c1ympA_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:notch 1 protein; |
PDBTitle: the crystal structure of a partial mouse notch-1 ankyrin2 domain: repeats 4 through 7 preserve an ankyrin fold
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Resolution | 2.20 Å |
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923 | . | . | . | . | . | . | 930 | . | . | . | . | . | . | . | . | . | 940 | . | . | . | . | . | . | . | . | |
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. | 950 | . | . | . | . | . | . | . | . | . | 960 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
K | F | N | P | L | A | L | L | L | D | S | S | L | E | G | E | F | D | L | V | Q | R | I | I | Y | E | . |
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V | D | D | P | S | L | P | N | D | E | G | I | T | A | L | H | N | A | V | C | A |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
G | T | T | P | L | I | L | . |
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A | A | R | L | A | L | E | G | M | L | E | D | L | I | N | S | H | A | D | V | N | A | V | D | D | L | G | K | S | A | L | H | W | A | A | A | V | N | N | V | D | A | A | V | V | L | L | K | N | G | A | N | K | D | M | Q | N | N | K | E | E | T | P | L | F | L | A | A | R | E |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
118 | . | 120 | . | . | . | . | |
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. | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . |
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970 | . | . | . | . | . | . | . | . | . | 980 | . | . | . | . | . | . | . | . | . | 990 | . | . | . | . | . | . | . | . | . | 1000 | . | . | . | . | . | . | . | . | . | 1010 | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
G | H | T | E | I | V | K | F | L | V | Q | F | G | V | N | V | N | A | A | D | S | D | G | W | T | P | L | H | C | A | A | S | C | N | N | V | Q | V | C | K | F | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
G | S | Y | E | T | A | K | V | L | L | D | H | F | A | N | R | D | I | T | D | H | M | D | R | L | P | R | D | I | A | Q | E | R | M | H | H | D | I | V | R | L | L |
Template Known Secondary structure |   |
T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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195 | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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