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Job Description | Q13625 | Confidence | 99.13% | Date | Wed Jun 6 09:54:47 BST 2012 |
Rank | 64 | Aligned Residues | 65 |
% Identity | 17% | Template | c2nyjA_ |
PDB info |
PDB header:transport protein | Chain: A: PDB Molecule:transient receptor potential cation channel |
PDBTitle: crystal structure of the ankyrin repeat domain of trpv1
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Resolution | 3.20 Å |
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952 | . | . | . | . | . | . | . | 960 | . | . | . | . | . | . | . | . | . | 970 | . | . | . | . | . | . | . | . | . | 980 | . | . | . | . | . | . | . | . | . | 990 | . | . | . | . | . | . | . | . | . | 1000 | . | . | . | . | . | . | . | . | . | 1010 | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
P | S | L | P | N | D | E | G | I | T | A | L | H | N | A | V | C | A | G | H | T | E | I | V | K | F | L | V | Q | F | G | V | N | V | N | A | A | D | S | D | G | W | T | P | L | H | C | A | A | S | C | N | N | V | Q | V | C | K | F | L | V | E | S | G | A |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
E | V | A | D | N | T | V | D | N | T | K | F | V | T | S | X | Y | N | E | I | L | I | L | G | A | K | L | H | P | T | L | K | L | E | E | I | T | N | R | K | G | L | T | P | L | A | L | A | A | S | S | G | K | I | G | V | L | A | Y | I | L | Q | R | E | I |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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293 | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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