Return to main results Retrieve Phyre Job Id

Job DescriptionQ13625
Confidence99.57%DateWed Jun 6 09:54:47 BST 2012
Rank17Aligned Residues104
% Identity15%Templatec2ajaA_
PDB info PDB header:protein bindingChain: A: PDB Molecule:ankyrin repeat family protein; PDBTitle: x-ray structure of an ankyrin repeat family protein q5zsv02 from legionella pneumophila. northeast structural genomics3 consortium target lgr21.
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   923......930.........940.........950.. .......960.........970.........980....... ..990.......
Predicted Secondary structure 









..

















...






Query SS confidence 





























. .


































. . .









Query Sequence  KFNPLALLLDSSLEGEFDLVQRIIYEVDDP. . SLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA. . . ADSDGWTPLH
Query Conservation     

 

  
   
    
          ..      
 
 

 
   
   

  
   
  


... 
  





Alig confidence 






...



















..


































...









Template Conservation      
  ...

  
    
  

                
 
  

  
   

  

                 
 
 
Template Sequence  NYQAFRL. . . AAENGHLHVLNRLCELAPTEIXAXIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAXIQAENYYAFRW
Template Known Secondary structure  ...TT
S
TTTSTT
S
GGG
Template Predicted Secondary structure 

...




































Template SS confidence 















































































   128.130.... .....140.........150.........160.........170.........180.........190.........200....
 
   998.1000.........1010.........1020.........
Predicted Secondary structure 














Query SS confidence 































Query Sequence  CAASCNNVQVCKFLVESGAAVFAMTYSDMQTA
Query Conservation   

          

  

     
 

  
 
Alig confidence 































Template Conservation   
   
   

  

  

             
Template Sequence  AAVGRGHHNVINFLLDCPVXLAYAEIHEFEYG
Template Known Secondary structure  STT

TTS
TTTTT
Template Predicted Secondary structure 













Template SS confidence 































   205....210.........220.........230......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions