Return to main results Retrieve Phyre Job Id

Job DescriptionQ13625
Confidence46.31%DateWed Jun 6 09:54:47 BST 2012
Rank417Aligned Residues257
% Identity11%Templatec3hajA_
PDB info PDB header:endocytosisChain: A: PDB Molecule:human pacsin2 f-bar; PDBTitle: crystal structure of human pacsin2 f-bar domain (p2121212 lattice)
Resolution2.78 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   60.........70.........80.........90.........100.........110.........120.........130.........
Predicted Secondary structure 
Query SS confidence 















































































Query Sequence  ERMFDVLQRFGSQRNEVRFFLRHERPPGRDIVSGPRSQDPSLKRNGVKVPGEYRRKENGVNSPRMDLTLAELQEMASRQQ
Query Conservation        
        
    
                                   
             

        
Alig confidence 

















































......























Template Conservation    
  
          
     


 

 



 
 

            ......   
               
  
 
Template Sequence  KRTVKRIDDGHRLCSDLMNCLHERARIEKAYAQQLTEWARRWRQLVEKGP. . . . . . QYGTVEKAWMAFMSEAERVSELHL
Template Known Secondary structure  SSS......

S
Template Predicted Secondary structure 



......


Template SS confidence 















































































   26...30.........40.........50.........60.........70..... ....80.........90.........
 
   140.........150.........160.........170.........180.........190.........200.........210.........
Predicted Secondary structure 
Query SS confidence 















































































Query Sequence  QQIEAQQQLLATKEQRLKFLKQQDQRQQQQVAEQEKLKRLKEIAENQEAKLKKVRALKGHVEQKRLSNGKLVEEIEQMNN
Query Conservation               
     
                                    
             
         
Alig confidence 















































































Template Conservation       
   
   
                
  
       
  
          
 
        
             
Template Sequence  EVKASLMNDDFEKIKNWQKEAFHKQMMGGFKETKEAEDGFRKAQKPWAKKLKEVEAAKKAHHAACKEEKLAISREANSKA
Template Known Secondary structure  T

B
SSSSB
Template Predicted Secondary structure 
Template SS confidence 















































































   100.........110.........120.........130.........140.........150.........160.........170.........
 
   220.........230.........240.........250.........260.........270.........280.........290........
Predicted Secondary structure  .
Query SS confidence 














































































.
Query Sequence  LFQQKQRELVLAVSKVEELTRQLEMLKNGRIDSHHDNQSAVAELDRLYKELQLRNKLNQEQNAKLQQQRECLNKRNSEV.
Query Conservation         
          
   

 
                
   
  
                     
     
 .
Alig confidence 













































..






























.
Template Conservation            
                 

   
   
        ..         
  

 
   

  
      
 
Template Sequence  DPSLNPEQLKKLQDKIEKCKQDVLKTKEKYEKSLKELDQGTPQYME. . NMEQVFEQCQQFEEKRLRFFREVLLEVQKHLD
Template Known Secondary structure 


S
STTS..
Template Predicted Secondary structure 

..
Template SS confidence 















































































   180.........190.........200.........210.........220..... ....230.........240.........250.......
 
   299300.........310.........320....
Predicted Secondary structure 
Query SS confidence 

























Query Sequence  AVMDKRVNELRDRLWKKKAALQQKEN
Query Conservation           
   
            
Alig confidence 

























Template Conservation               
   
  

   
Template Sequence  LSNVAGYKAIYHDLEQSIRAADAVED
Template Known Secondary structure 
SS
T

Template Predicted Secondary structure 

Template SS confidence 

























   258.260.........270.........280...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions