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Job Description | Q13625 | Confidence | 83.30% | Date | Wed Jun 6 09:54:47 BST 2012 |
Rank | 341 | Aligned Residues | 109 |
% Identity | 16% | Template | c2v66C_ |
PDB info |
PDB header:structural protein | Chain: C: PDB Molecule:nuclear distribution protein nude-like 1; |
PDBTitle: crystal structure of the coiled-coil domain of ndel1 (a.a.2 58 to 169)c
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Resolution | 2.10 Å |
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190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
L | K | K | V | R | A | L | K | G | H | V | E | Q | K | R | L | S | N | G | K | L | V | E | E | I | E | Q | M | N | N | L | F | Q | Q | K | Q | R | E | L | V | L | A | V | S | K | V | E | E | L | T | R | Q | L | E | M | L | K | N | G | R | I | D | S | H | H | D | N | Q | S | A | V | A | E | L | D | R | L | Y | K | E |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
E | Q | R | N | R | D | L | Q | A | D | N | Q | R | L | K | Y | E | V | E | A | L | K | E | K | L | E | H | Q | Y | A | Q | S | Y | K | Q | V | S | V | L | E | D | D | L | S | Q | T | R | A | I | K | E | Q | L | H | K | Y | V | R | E | L | E | Q | A | N | D | D | L | E | R | A | K | R | A | T | I | V | S | L | E | D |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
59 | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . |
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270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
L | Q | L | R | N | K | L | N | Q | E | Q | N | A | K | L | Q | Q | Q | R | E | C | L | N | K | R | N | S | E | V |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
F | E | Q | R | L | N | Q | A | I | E | R | N | A | F | L | E | S | E | L | D | E | K | E | S | L | L | V | S | V |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
139 | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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