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Job DescriptionQ13625
Confidence99.53%DateWed Jun 6 09:54:47 BST 2012
Rank20Aligned Residues91
% Identity36%Templatec2rfaA_
PDB info PDB header:membrane proteinChain: A: PDB Molecule:transient receptor potential cation channel subfamily v PDBTitle: crystal structure of the mouse trpv6 ankyrin repeat domain
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   925....930.........940....... ..950.........960.........970.........980.......
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Query Sequence  NPLALLLDSSLEGEFDLVQRIIY. EVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA. . . . . . . . . . . . . . . .
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Template Sequence  SPLLL. . . AAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHI
Template Known Secondary structure 
...TT
TTT
S
TT


TTS

TT

GGGGG



STTTTT

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   47..50. ........60.........70.........80.........90.........100.........110.........120...
 
  
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ................................................................................
Template Conservation                                                                                  
Template Sequence  AVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHIL
Template Known Secondary structure  TT
TT

TT



SGGGS

TT
S



SST
TT

TT


TTS

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   124.....130.........140.........150.........160.........170.........180.........190.........200...
 
   988.990.........1000.........1010........
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ADSDGWTPLHCAASCNNVQVCKFLVESGAAV
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Template Sequence  ILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKHI
Template Known Secondary structure  T
S
TT
S
SS

GGG


TTS

T

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   204.....210.........220.........230.........240.........250.........260.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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