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Job DescriptionQ13625
Confidence96.00%DateWed Jun 6 09:54:47 BST 2012
Rank306Aligned Residues129
% Identity10%Templatec2d3eD_
PDB info PDB header:contractile proteinChain: D: PDB Molecule:general control protein gcn4 and tropomyosin 1 PDBTitle: crystal structure of the c-terminal fragment of rabbit2 skeletal alpha-tropomyosin
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   192.......200.........210.........220.........230.........240.........250.........260.........270.
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Query Sequence  KVRALKGHVEQKRLSNGKLVEEIEQMNNLFQQKQRELVLAVSKVEELTRQLEMLKNGRIDSHHDNQSAVAELDRLYKELQ
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Template Sequence  KVEELLSKNYHLENEVARLKKLLERAEERAELSEGKCAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLK
Template Known Secondary structure  TTSTTTTTTGGGT
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   154.....160.........170.........180.........190.........200.........210.........220.........230...
 
   272.......280.........290.........300.........310.........320
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Query Sequence  LRNKLNQEQNAKLQQQRECLNKRNSEVAVMDKRVNELRDRLWKKKAALQ
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Template Sequence  EAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMT
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   234.....240.........250.........260.........270.........280..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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