Return to main results Retrieve Phyre Job Id

Job DescriptionQ13625
Confidence97.52%DateWed Jun 6 09:54:47 BST 2012
Rank281Aligned Residues285
% Identity11%Templatec2dfsA_
PDB info PDB header:contractile protein/transport proteinChain: A: PDB Molecule:myosin-5a; PDBTitle: 3-d structure of myosin-v inhibited state
Resolution24.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   37..40.........50.........60.........70.........80.........90.........100.........110......
Predicted Secondary structure 
Query SS confidence 















































































Query Sequence  EPGESDCHLAEVWCGSERPVADNERMFDVLQRFGSQRNEVRFFLRHERPPGRDIVSGPRSQDPSLKRNGVKVPGEYRRKE
Query Conservation 
  
    


     
            
        
    
                                   
Alig confidence 















































































Template Conservation   
  

  
 
 
   
  

   
    

       
   

   
    
      
  

   

   
    
  
Template Sequence  QVAYLEKIRADKLRAACIRIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQARCYATFLRRTRAAIIIQKFQRMYVVRKR
Template Known Secondary structure 
Template Predicted Secondary structure 

Template SS confidence 















































































   755....760.........770.........780.........790.........800.........810.........820.........830....
 
   117..120.........130.........140.........150.........160.........170.........180.........190......
Predicted Secondary structure 
Query SS confidence 















































































Query Sequence  NGVNSPRMDLTLAELQEMASRQQQQIEAQQQLLATKEQRLKFLKQQDQRQQQQVAEQEKLKRLKEIAENQEAKLKKVRAL
Query Conservation               

                     
     
                                    
Alig confidence 
























.





















































Template Conservation            


  
    


  .    
 

  

   
    
        
   

   
   





 
  
 
Template Sequence  YQCMRDATIALQALLRGYLVRNKYQ. MMLREHKSIIIQKHVRGWLARVHYHRTLKAIVYLQCCYRRMMAKRELKKLMNNL
Template Known Secondary structure  .TTTTTTTTTT

Template Predicted Secondary structure  .
Template SS confidence 















































































   835....840.........850......... 860.........870.........880.........890.........900.........910...
 
   197..200.........210.........220.........230.........240.........250.........260.........270......
Predicted Secondary structure 
Query SS confidence 















































































Query Sequence  KGHVEQKRLSNGKLVEEIEQMNNLFQQKQRELVLAVSKVEELTRQLEMLKNGRIDSHHDNQSAVAELDRLYKELQLRNKL
Query Conservation               
                
          
   

 
                
   
  
       
Alig confidence 















































































Template Conservation 
       


    
 
   
 
          

 

  
   
     
   
 
   
   
 
 
  


     
Template Sequence  EITYSTETEKLRSDVERLRMSEEEAKNATNRVLSLQEEIAKLRKELHQTQTEKKTIEEWADKYKHETEQLVSELKEQNTL
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 















































































   955....960.........970.........980.........990.........1000.........1010.........1020.........1030....
 
   277..280.........290.........300.........310.........320....
Predicted Secondary structure 
Query SS confidence 















































Query Sequence  NQEQNAKLQQQRECLNKRNSEVAVMDKRVNELRDRLWKKKAALQQKEN
Query Conservation                
     
          
   
            
Alig confidence 




















..
























Template Conservation 
  
 
 
   
    
   
..     
 

 
 

 


 



 
Template Sequence  LKTEKEELNRRIHDQAKEITE. . TMEKKLVEETKQLELDLNDERLRYQ
Template Known Secondary structure  ..T
Template Predicted Secondary structure  ..

Template SS confidence 















































   1035....1040.........1050..... ....1060.........1070.........1080
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions