Return to main results Retrieve Phyre Job Id

Job DescriptionQ13625
Confidence38.63%DateWed Jun 6 09:54:47 BST 2012
Rank447Aligned Residues243
% Identity10%Templated1f5na1
SCOP infoInterferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70.........80.....
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Query Sequence  LTVYLSNNEQHFTEVPVTPETICRDVVDLCKEPGESDCHLAEVWCGSERPVADNERMFDVLQRFGSQRNEVRFFLRHERP
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Template Sequence  IAHYEQQMGQKVQLPTESLQELLDLHRDSEREAIEVFIRSSFKDVDHLFQKELAAQLEKKRDDFCKQNQEASSDRCSGLL
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   332.......340.........350.........360.........370.........380.........390.........400.........410.
 
   86...90........ .100.........110.........120.........130.........140.........150........
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Query Sequence  PGRDIVSGPRSQD. . . . . . . PSLKRNGVKVPGEYRRKENGVNSPRMDLTLAELQEMASRQQQQIEAQQQLLATKEQRLKF
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Template Conservation            
                                      
 
                  
         
Template Sequence  QVIFSPLEEEVKAGIYSKPGGYRLFVQKLQDLKKKYYEEPRKGIQAEEILQTYLKSKESMTDAILQTDQTLTEKEKEIEV
Template Known Secondary structure  TTTTSSTTSS


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   412.......420.........430.........440.........450.........460.........470.........480.........490.
 
   159160.........170.........180.........190.........200.........210.........220........ .230.......
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Query Sequence  LKQQDQRQQQQVAEQEKLKRLKEIAENQEAKLKKVRALKGHVEQKRLSNGKLVEEIEQMNNLFQQKQREL. VLAVSKVEE
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Template Conservation          
                         
    
    
 
      
          
      
        
Template Sequence  ERVKAESAQASAKMLHEMQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQERTLALKLQEQEQLLKEGFQKESRI
Template Known Secondary structure  T
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   492.......500.........510.........520.........530.........540.........550.........560.........570.
 
   238.240........
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Query Sequence  LTRQLEMLKNG
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Template Sequence  MKNEIQDLQTK
Template Known Secondary structure 
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   572.......580..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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