Return to main results Retrieve Phyre Job Id

Job DescriptionQ13625
Confidence99.04%DateWed Jun 6 09:54:47 BST 2012
Rank83Aligned Residues56
% Identity21%Templatec1w70A_
PDB info PDB header:sh3 domainChain: A: PDB Molecule:neutrophil cytosol factor 4; PDBTitle: sh3 domain of p40phox complexed with c-terminal polyproline2 region of p47phox
Resolution1.46 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1056...1060.........1070.........1080.........1090.........1100.........1110....
Predicted Secondary structure 




































Query SS confidence 


























































Query Sequence  IMNKGVIYALWDYEPQNDDELPMKEGDCMTIIHREDEDEIEWWWARLNDKEGYVPRNLL
Query Conservation      
 
 
   
     


           
     
  


      






  
Alig confidence 




































...


















Template Conservation          

  
      



  

 
 

     ... 
  
   
  
 

  

Template Sequence  LIKHMRAEALFDFTGNSKLELNFKAGDVIFLLSRINK. . . DWLEGTVRGATGIFPLSFV
Template Known Secondary structure 


S
SS
B

SSTTB

B
TT

SS...STTGGG
Template Predicted Secondary structure 

















...




Template SS confidence 


























































   169170.........180.........190.........200..... ....210.........220....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions