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Job DescriptionQ13625
Confidence97.83%DateWed Jun 6 09:54:47 BST 2012
Rank277Aligned Residues176
% Identity14%Templatec3vkgB_
PDB info PDB header:motor proteinChain: B: PDB Molecule:dynein heavy chain, cytoplasmic; PDBTitle: crystal structure of an motor protein
Resolution2.81 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   103......110.........120.........130.. .......140.........150.........160.........170. .......
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Query Sequence  RNGVKVPGEYRRKENGVNSPRMDLTLAELQ. . . EMASRQQQQIEAQQQLLATKEQRLKFLKQQDQRQQQQVA. EQEKLKR
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Template Sequence  INQVVLLINEKRDQLEEEQLHLNIGLKKLRDTEAQVKDLQVSLAQKNRELDVKNEQANQKLKQMVQDQQAAEIKQKDARE
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   3264.....3270.........3280.........3290.........3300.........3310.........3320.........3330.........3340...
 
   179180.........190.........200.........210.........220.........230.........240.........250........
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Query Sequence  LKEIAENQEAKLKKVRALKGHVEQKRLSNGKLVEEIEQMNNLFQQKQRELVLAVSKVEELTRQLEMLKNGRIDSHHDNQS
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Template Sequence  LQVQLDVRNKEIAVQEQLENAANELKLKQDEIVATITALEKSIATYKEEYATLIRETEQIKTESSKVKNKVDRSIALLDN
Template Known Secondary structure  TT


TTTT
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   3344.....3350.........3360.........3370.........3380.........3390.........3400.........3410.........3420...
 
   259260.........270........
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Query Sequence  AVAELDRLYKELQLRNKLNQ
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Template Sequence  LNSERGRWEQQSENFNTQMS
Template Known Secondary structure  TTTTT
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   3567..3570.........3580......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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