 |
Job Description | Q13625 | Confidence | 99.04% | Date | Wed Jun 6 09:54:47 BST 2012 |
Rank | 82 | Aligned Residues | 62 |
% Identity | 31% | Template | c2k2mA_ |
PDB info |
PDB header:signaling protein | Chain: A: PDB Molecule:eps8-like protein 1; |
PDBTitle: structural basis of pxxdy motif recognition in sh3 binding
|
Resolution | UNK |
|
 |
  |   |
1053 | . | . | . | . | . | . | 1060 | . | . | . | . | . | . | . | . | . | 1070 | . | . | . | . | . | . | . | . | . | 1080 | . | . | . | . | . | . | . | . | . | 1090 | . | . | . | . | . | . | . | . | . | 1100 | . | |
. | . | . | . | . | . | . | . | 1110 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  | . |
|
|
|  |  |
|
|
|
|
|
|  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | M | G | I | M | N | K | G | V | I | Y | A | L | W | D | Y | E | P | Q | N | D | D | E | L | P | M | K | E | G | D | C | M | T | I | I | H | R | E | D | E | D | E | I | E | W | W | W | A | R | . |
L | N | D | K | E | G | Y | V | P | R | N | L | L | G | L | Y | P |
Query Conservation |   |
  |   |
|   |   |   |   |
|   |
|   |
|   |   |   |
|   |   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |
|
|
|   |   | . |   |   |   |   |
|
|
|
|
|
|
|   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|   |   |   |   |   |   |
|
|
|   |   |   |
|
|   |
|   |
|   |   |   |   |   |   | . | . | . | . |   |
|   |   |   |   |   |   |
|   |   |
|   |
|
|   |   |
|
|   |   |   |
|
Template Sequence |   |
P | L | G | S | G | A | L | K | W | V | L | C | N | Y | D | F | Q | A | R | N | S | S | E | L | S | V | K | Q | R | D | V | L | E | V | L | D | D | S | R | K | . |
. |
. |
. |
W | W | K | V | R | D | P | A | G | Q | E | G | Y | V | P | Y | N | I | L | T | P | Y | P |
Template Known Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  | S | S |
| B |
|
|
| S | S | S | B |
|
| B |
| T | T |
|  |  |  |  |  |  |
| S | S | S | . | . | . | . |  |  |  |  |  |
| T | T | S |
|
|  |  |  |  | G | G | G |  |  |  |
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
| . | . | . | . |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
474 | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | |
|
|
|
. | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|