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Job Description | Q13625 | Confidence | 34.42% | Date | Wed Jun 6 09:54:47 BST 2012 |
Rank | 489 | Aligned Residues | 33 |
% Identity | 18% | Template | c1ce0B_ |
PDB info |
PDB header:hiv-1 envelope protein | Chain: B: PDB Molecule:protein (leucine zipper model h38-p1); |
PDBTitle: trimerization specificity in hiv-1 gp41: analysis with a2 gcn4 leucine zipper model
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Resolution | 2.40 Å |
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189 | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
K | L | K | K | V | R | A | L | K | G | H | V | E | Q | K | R | L | S | N | G | K | L | V | E | E | I | E | Q | M | N | N | L | F |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
L | L | Q | R | I | K | Q | Q | E | D | K | L | E | E | T | L | S | K | I | Y | H | L | E | N | E | I | A | R | V | K | K | L | L |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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