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Job DescriptionQ13625
Confidence96.77%DateWed Jun 6 09:54:47 BST 2012
Rank296Aligned Residues178
% Identity14%Templatec3ojaA_
PDB info PDB header:protein bindingChain: A: PDB Molecule:leucine-rich immune molecule 1; PDBTitle: crystal structure of lrim1/apl1c complex
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   94.....100.........110.........120.........130.........140.........150.........160.........170...
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Query Sequence  PRSQDPSLKRNGVKVPGEYRRKENGVNSPRMDLTLAELQEMASRQQQQIEAQQQLLATKEQRLKFLKQQDQRQQQQVAEQ
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Template Sequence  PFADRLIALKRKEHALLSTERLECERENQARQREIDALKEQYRTVIDQVTLRKQAKITLEQKKKALDEQVSNGRRAHAEL
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   324.....330.........340.........350.........360.........370.........380.........390.........400...
 
   174.....180.........190. ........200.........210.........220.........230.........240.........250..
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Query Sequence  EKLKRLKEIAENQEAKLK. KVRALKGHVEQKRLSNGKLVEEIEQMNNLFQQKQRELVLAVSKVEELTRQLEMLKNGRIDS
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Template Sequence  D. . GTLQQAVGQIELQHATEEQSPLQLLRAIVKRYEEMYVEQQSVQNNAIRDWDMYQHKETQLAEENARLKKLNGEADLA
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   409 410.........420.........430.........440.........450.........460.........470.........480......
 
   253......260.........270...
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Query Sequence  HHDNQSAVAELDRLYKELQLR
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Template Sequence  LASANATLQELVVREQNLASQ
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   487..490.........500.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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