Return to main results Retrieve Phyre Job Id

Job DescriptionQ13625
Confidence99.44%DateWed Jun 6 09:54:47 BST 2012
Rank32Aligned Residues98
% Identity23%Templatec2kbxA_
PDB info PDB header:cell adhesionChain: A: PDB Molecule:integrin-linked protein kinase; PDBTitle: solution structure of ilk-pinch complex
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   925....930.........940........
Predicted Secondary structure 



........................................................
Query SS confidence 























. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  NPLALLLDSSLEGEFDLVQRIIYE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation   

 

  
   
    
      ........................................................
Alig confidence 




...















........................................................
Template Conservation 



 ...

  
    
  

       
  
    
 
                                        
Template Sequence  DDIFT. . . QCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHG
Template Known Secondary structure 
...TTT


TTS
S



TT




T

S



TTS

T
Template Predicted Secondary structure 
...
























































Template SS confidence 















































































   2.... ...10.........20.........30.........40.........50.........60.........70........
 
   949950.........960.........970.........980.........990.........1000.........1010.......
Predicted Secondary structure  ...........


































Query SS confidence  . . . . . . . . . . .




































































Query Sequence  . . . . . . . . . . . VDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAA
Query Conservation  ...........          
 
 

 
   
   

  
   
  


 
  





 

          

  

 
Alig confidence  ...........




































































Template Conservation                                          
   




  
  
 



 
   
   

  

  


Template Sequence  HRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQN
Template Known Secondary structure 
SSS
GGG


SS


T
TTT

TT


SSS

TTT

TTTTT
Template Predicted Secondary structure 































































Template SS confidence 















































































   7980.........90.........100.........110.........120.........130.........140.........150........
 
   1018.1020.....
Predicted Secondary structure 





Query SS confidence 







Query Sequence  VFAMTYSD
Query Conservation      
 

Alig confidence 







Template Conservation 

      
Template Sequence  LNRIPYKD
Template Known Secondary structure  T




SS
Template Predicted Secondary structure 







Template SS confidence 







   159160......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions