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Job DescriptionQ13625
Confidence96.88%DateWed Jun 6 09:54:47 BST 2012
Rank293Aligned Residues302
% Identity13%Templatec2ch7A_
PDB info PDB header:chemotaxisChain: A: PDB Molecule:methyl-accepting chemotaxis protein; PDBTitle: crystal structure of the cytoplasmic domain of a bacterial2 chemoreceptor from thermotoga maritima
Resolution2.5 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  QHFTEVPVTPETICRDVVDLCKEPGESDCHLAEVWCGSERPVADNERMFDVLQRFGSQRNEVRFFLRHERPPGRDIVS. G
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Template Sequence  SHMKDVQTETFSVAESIEEISKANEEITNQLLGISKEMDNISTRIESISASVQETTAGSEEISSATKNIADSAQQAASFA
Template Known Secondary structure  TTT
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   222.......230.........240.........250.........260.........270.........280.........290.........300.
 
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Query Sequence  PRSQDPSLKRNGVKVPGEYRRKENGVNSPRMDLTLAELQEMASRQQQQIEAQQQLLATKEQRLKFLKQQDQR. . . . . QQQ
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Template Conservation                                                               
  

  

  
       
Template Sequence  DQSTQLAKEAGDALKKVIEVTRMISNSAKDVERVVESFQKGAEEITSFVETINAIAEQTNLLALNAAIEAARAGEAGRGF
Template Known Secondary structure  TTTT
TT
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   302.......310.........320.........330.........340.........350.........360.........370.........380.
 
   169170.........180.........190.........200.........210.........220.........230.........240........
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Query Sequence  QVAEQEKLKRLKEIAENQEAKLKKVRALKGHVEQKRLSNGKLVEEIEQMNNLFQQKQRELVLAVSKVEELTRQLEMLKNG
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Template Conservation                      
      
                               
                
   
Template Sequence  AVVADEIRKLAEESQQASENVRRVVNEIRSIAEDAGKVSSEITARVEEGTKLADEADEKLNSIVGAVERINEMLQNIAAA
Template Known Secondary structure  TTTT
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   382.......390.........400.........410.........420.........430.........440.........450.........460.
 
   249250.........260.........270.........280.........290.........300.........310......
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Query Sequence  RIDSHHDNQSAVAELDRLYKELQLRNKLNQEQNAKLQQQRECLNKRNSEVAVMDKRVNELRDRLWKKK
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Template Conservation            
      
             
      
      
      
      
   
  

Template Sequence  IEEQTAAVDEITTAMTENAKNAEEITNSVKEVNARLQEISASTEEVTSRVQTIRENVQMLKEIVARYK
Template Known Secondary structure  STTT
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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