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Job Description | Q13625 | Confidence | 99.30% | Date | Wed Jun 6 09:54:47 BST 2012 |
Rank | 44 | Aligned Residues | 92 |
% Identity | 28% | Template | c3v30A_ |
PDB info |
PDB header:protein binding | Chain: A: PDB Molecule:dna-binding protein rfxank; |
PDBTitle: crystal structure of the peptide bound complex of the ankyrin repeat2 domains of human rfxank
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Resolution | 1.57 Å |
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930 | . | . | . | . | . | . | . | . | . | 940 | . | . | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
L | L | D | S | S | L | E | G | E | F | D | L | V | Q | R | I | I | Y | E | . |
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Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
I | H | Q | L | A | A | Q | G | E | L | D | Q | L | K | E | H | L | R | K | G | D | N | L | V | N | K | P | D | E | R | G | F | T | P | L | I | W | A | S | A | F | G | E | I | E | T | V | R | F | L | L | E | W | G | A | D | P | H | I | L | A | K | E | R | E | S | A | L | S | L | A | S | T | G | G | Y | T | D | I | V |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
94 | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . |
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949 | 950 | . | . | . | . | . | . | . | . | . | 960 | . | . | . | . | . | . | . | . | . | 970 | . | . | . | . | . | . | . | . | . | 980 | . | . | . | . | . | . | . | . | . | 990 | . | . | . | . | . | . | . | . | . | 1000 | . | . | . | . | . | . | . | . | . | 1010 | . | . | . | . | . | . | . | . | . | 1020 | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
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V | D | D | P | S | L | P | N | D | E | G | I | T | A | L | H | N | A | V | C | A | G | H | T | E | I | V | K | F | L | V | Q | F | G | V | N | V | N | A | A | D | S | D | G | W | T | P | L | H | C | A | A | S | C | N | N | V | Q | V | C | K | F | L | V | E | S | G | A | A | V | F | A | M |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
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Template Sequence |   |
G | L | L | L | E | R | D | V | D | I | N | I | Y | D | W | N | G | G | T | P | L | L | Y | A | V | R | G | N | H | V | K | C | V | E | A | L | L | A | R | G | A | D | L | T | T | E | A | D | S | G | Y | T | P | M | D | L | A | V | A | L | G | Y | R | K | V | Q | Q | V | I | E | N | H | I | L | K | L | F | Q | S |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
174 | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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