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Job DescriptionQ13625
Confidence99.63%DateWed Jun 6 09:54:47 BST 2012
Rank12Aligned Residues118
% Identity19%Templatec3keaB_
PDB info PDB header:viral proteinChain: B: PDB Molecule:k1l; PDBTitle: structure function studies of vaccinia virus host-range protein k12 reveal a novel ankyrin repeat interaction surface for k1s function
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   923......930.........940.........950.........960.........970.........980.........990.........1000..
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Query Sequence  KFNPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASC
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Template Sequence  GHSASYY. . . AIADNNVRLVCTLLNAGALKNLLE. . NEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDS
Template Known Secondary structure  S

...TT
TTGGGS

T..T

TTSSS
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TTS

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   30...... ...40.........50.........60 .........70.........80.........90.........100....
 
   1003......1010.........1020.........1030.........1040.......
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Query Sequence  NNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFL
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Template Sequence  GNXQTVKLFVKKNWRLXFYGKTGWKTSFYHA. . VXLNDVSIVSYF
Template Known Secondary structure  T

GGGGG
SSSGGGS..TT
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   105....110.........120.........130..... ....140.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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