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Job DescriptionQ13625
Confidence99.24%DateWed Jun 6 09:54:47 BST 2012
Rank54Aligned Residues87
% Identity30%Templatec2jabC_
PDB info PDB header:de novo proteinChain: C: PDB Molecule:h10-2-g3; PDBTitle: a designed ankyrin repeat protein evolved to picomolar2 affinity to her2
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   925....930.........940.........950.........960.........970.........980.
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Query Sequence  NPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQF. . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  KKLLE. . . AARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGH
Template Known Secondary structure  ...T
TT

TT


TTS

T
TT

TT


TT


T
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   16...20 .........30.........40.........50.........60.........70.........80.........90..
 
   982.......990.........1000.........1010....
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Query Sequence  . . . . . . . . . . GVNVNAADSDGWTPLHCAASCNNVQVCKFLVES
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Template Sequence  LEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKL
Template Known Secondary structure  TT

TT


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TT
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   93......100.........110.........120.........130.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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