Return to main results Retrieve Phyre Job Id

Job DescriptionQ13625
Confidence98.93%DateWed Jun 6 09:54:47 BST 2012
Rank142Aligned Residues72
% Identity19%Templatec1wxuA_
PDB info PDB header:protein transportChain: A: PDB Molecule:peroxisomal biogenesis factor 13; PDBTitle: solution structure of the sh3 domain of mouse peroxisomal2 biogenesis factor 13
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1055....1060.........1070.........1080.........1090.........1100. ........1110.........1120......
Predicted Secondary structure 



























..




















Query SS confidence 














































. .
























Query Sequence  GIMNKGVIYALWDYEPQNDDELPMKEGDCMTIIHREDEDEIEWWWAR. . LNDKEGYVPRNLLGLYPRIKPRQRS
Query Conservation 
    
 
 
   
     


           
     
  


  ..    






  
           
Alig confidence 














































..
























Template Conservation 
      
 




 
    


   

 
 
          
           
  
 




          
Template Sequence  GEDDHVVARAEYDFVAVSDEEISFRAGDMLNLALKEQQPKVRGWLLASLDGQTTGLIPANYVKILGKRRGRKTI
Template Known Secondary structure  TSS
BB
SS
B

SSSSB

B
SS
B


TTTS
S
SS
SSSSS

STT


B

STTT
Template Predicted Secondary structure 







































Template SS confidence 









































































   13......20.........30.........40.........50.........60.........70.........80......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions