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Job Description | Q13625 | Confidence | 90.88% | Date | Wed Jun 6 09:54:47 BST 2012 |
Rank | 328 | Aligned Residues | 116 |
% Identity | 16% | Template | c2e7sM_ |
PDB info |
PDB header:endocytosis/exocytosis | Chain: M: PDB Molecule:rab guanine nucleotide exchange factor sec2; |
PDBTitle: crystal structure of the yeast sec2p gef domain
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Resolution | 3.00 Å |
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173 | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
Q | E | K | L | K | R | L | K | E | I | A | E | N | Q | E | A | K | L | K | K | V | R | A | L | K | G | H | V | E | Q | K | R | L | S | N | G | K | L | V | E | E | I | E | Q | M | N | N | L | F | Q | Q | K | Q | R | E | L | V | L | A | V | S | K | V | E | E | L | T | R | Q | L | E | M | L | K | N | G | R | I | D | S |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
E | E | Q | L | N | K | S | L | K | T | I | A | S | Q | K | A | A | I | E | N | Y | N | Q | L | K | E | D | Y | N | T | L | K | R | E | L | S | D | R | D | D | E | V | K | R | L | R | E | D | I | A | K | E | N | E | L | R | T | K | A | E | E | E | A | D | K | L | N | K | E | V | E | D | L | T | A | . |
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Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
32 | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | |
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253 | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
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Query Sequence |   |
H | H | D | N | Q | S | A | V | A | E | L | D | R | L | Y | K | E | L | Q | L | R | N | K | L | N | Q | E | Q | N | A | K | L | Q | Q | Q | R | E | C | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
F | D | E | A | N | N | L | V | A | D | A | R | X | E | K | Y | A | I | E | I | L | N | K | R | L | T | E | Q | L | R | E | K | D | X | L | L | D | T | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | G | G | G |  |  |  |  |  | T | T | T | T | T | T | S | S | T | T | T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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109 | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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