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Job DescriptionQ13625
Confidence38.10%DateWed Jun 6 09:54:47 BST 2012
Rank452Aligned Residues212
% Identity8%Templatec2odvA_
PDB info PDB header:structural proteinChain: A: PDB Molecule:plectin 1; PDBTitle: crystal structure of a fragment of the plakin domain of plectin, cys2 to ala mutant.
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   40.........50.........60...... ...70.........80.........90.........100.........110....
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Query Sequence  ESDCHLAEVWCGSERPVADNERMFDVL. . . . . QRFGSQRNEVRFFLRHERPPGRDIVSGPRSQDPSLKRNGVKVPGEYRR
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Template Sequence  ELQLRWQEYRELVLLLLQWMRHHTAAFEERFPSSFEEIEILWSQFLKFKEMELPAKEADKNRSKGIYQSLEGAVQAGQLK
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   303......310.........320.........330.........340.........350.........360.........370.........380..
 
   115....120.........130.........140.........150.........160.........170.........180.........190....
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Query Sequence  KENGVNSPRMDLTLAELQEMASRQQQQIEAQQQLLATKEQRLKFLKQQDQRQQQQVAEQEKLKRLKEIAENQEAKLKKVR
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Template Sequence  VPPGYHPLDVEKEWGKLHVAILEREKQLRSEFERLEALQRIVTKLQMEAGLAEEQLNQADALLQSDVRLLAAGKVPQRAG
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   384.....390.........400.........410.........420.........430.........440.........450.........460...
 
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Query Sequence  ALKGHVEQKRLSNGKLVEEIEQMNNLFQQKQRELVLAVSKVEELTRQLEMLKNGRID
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Template Sequence  EVERDLDKADSMIRLLFNDVQTLKDGRHPQGEQMYRRVYRLHKRLVAIRTEYNLRLK
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   464.....470.........480.........490.........500.........510.........520
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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