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Job DescriptionQ13625
Confidence99.45%DateWed Jun 6 09:54:47 BST 2012
Rank28Aligned Residues102
% Identity25%Templatec3deoA_
PDB info PDB header:protein transport, membrane proteinChain: A: PDB Molecule:signal recognition particle 43 kda protein; PDBTitle: structural basis for specific substrate recognition by the2 chloroplast signal recognition particle protein cpsrp43
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   928.930.........940.........950.........960.........970.........980.........990 .........1000......
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Query Sequence  ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADS. DGWTPLHCAASCNNVQ
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Template Sequence  TPWWTAARKADEQALSQLLE. DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPE
Template Known Secondary structure  TT
TT.TS
TT


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T
TT

TT


SSSS

TT
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   130.........140......... 150.........160.........170.........180.........190.........200........
 
   1007..1010.........1020.........1030.
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Query Sequence  VCKFLVESGAAVFAMTYSDMQTAAD
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Template Sequence  VVEALVELGADIEVED. ERGLTALE
Template Known Secondary structure  T

TT


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   209210.........220.... .....230..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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