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Job DescriptionQ13625
Confidence78.35%DateWed Jun 6 09:54:47 BST 2012
Rank347Aligned Residues104
% Identity17%Templatec2pmsD_
PDB info PDB header:metal transport, hydrolaseChain: D: PDB Molecule:pneumococcal surface protein a (pspa); PDBTitle: crystal structure of the complex of human lactoferrin n-lobe and2 lactoferrin-binding domain of pneumococcal surface protein a
Resolution2.91 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   129130.........140.........150.........160. ........170.........180.........190.........200......
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Query Sequence  AELQEMASRQQQQIEAQQQLLATKEQRLKFLKQ. . QDQRQQQQVAEQEKLKRLKEIAENQEAKLKKVRALKGHVEQKRLS
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Template Sequence  SHMDAEEVAPQAKIAELENQVHRLEQELKEIDEAPLQSKLDAKKAKLSKLEELSDKIDELDAEIAKLEDQLKAAEEEDYF
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   165....170.........180.........190.........200.........210.........220.........230.........240....
 
   207..210.........220.........230..
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Query Sequence  NGKLVEEIEQMNNLFQQKQRELVLAV
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Template Sequence  KEGLEKTIAAKKAELEKTEADLKKAV
Template Known Secondary structure  T
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   261........270.........280......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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