Return to main results Retrieve Phyre Job Id

Job DescriptionQ13625
Confidence98.81%DateWed Jun 6 09:54:47 BST 2012
Rank221Aligned Residues50
% Identity44%Templatec3rebD_
PDB info PDB header:protein bindingChain: D: PDB Molecule:tyrosine-protein kinase hck; PDBTitle: hiv-1 nef protein in complex with engineered hck-sh3 domain
Resolution3.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1061........1070.........1080.........1090.........1100. ........1110....
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Query Sequence  VIYALWDYEPQNDDELPMKEGDCMTIIHREDEDEIEWWWAR. . LNDKEGYVPRNLL
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Template Sequence  IVVALYDYVSWSPDDLSFQKGDQMVVLEESGE. . . . WWKARSLATRKEGYIPSNYV
Template Known Secondary structure  SS
B

SSTTB

B
TT

SSS....TTT

GGG
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   82.......90.........100.........110... ......120.........130...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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