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Job DescriptionQ13625
Confidence46.58%DateWed Jun 6 09:54:47 BST 2012
Rank416Aligned Residues233
% Identity9%Templatec1quuA_
PDB info PDB header:contractile proteinChain: A: PDB Molecule:human skeletal muscle alpha-actinin 2; PDBTitle: crystal structure of two central spectrin-like repeats from2 alpha-actinin
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   56...60.........70.........80.........90.........100.........110.........120.........130.....
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Query Sequence  VADNERMFDVLQRFGSQRNEVRFFLRHERPPGRDIVSGPRSQDPSLKRNGVKVPGEYRRKENGVNSPRMDLTLAELQEMA
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Template Sequence  IRRLERLEHLAEKFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQDRVEQIAAIAQELNELD
Template Known Secondary structure  TTT



SS

TT
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   6...10.........20.........30.........40.........50.........60.........70.........80.....
 
   136...140.........150.........160.........170.........180.........190.........200... ...
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Query Sequence  SRQQQQIEAQQQLLATKEQRLKFLKQQDQRQQQQVAEQEKLKRLKEIAENQEAKLKKVRALKGHVEQK. . . . . . . . . RLS
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Template Sequence  YHDAVNVNDRCQKICDQWDRLGTL. . TQKRREALERMEKLLETIDQLHLEFAKRAAPFNNWMEGAMEDLQDMFIVHSIEE
Template Known Secondary structure 
TT..TTTT





STTT
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   86...90.........100......... 110.........120.........130.........140.........150.........160...
 
   207..210.........220.........230.........240.........250.........260.........270.........280......
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Query Sequence  NGKLVEEIEQMNNLFQQKQRELVLAVSKVEELTRQLEMLKNGRIDSHHDNQSAVAELDRLYKELQLRNKLNQEQNAKLQQ
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Template Sequence  IQSLITAHEQFKATLPEADGERQSIMAIQNEVEKVIQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQEELA
Template Known Secondary structure  TS
TTS

S
TT
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   164.....170.........180.........190.........200.........210.........220.........230.........240...
 
   287..290
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Query Sequence  QREC
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Template Sequence  RQHA
Template Known Secondary structure  S
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   244...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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