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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3jxiA_

Fold library idPDB HeaderMoleculeTitle
c3jxiA_PDB header: membrane proteinChain: A: PDB Molecule: vanilloid receptor-related osmotically activatedPDBTitle: crystal structure of the chicken trpv4 ankyrin repeat domain


Added to library: Sat Aug 28 18:02:26 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MKVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLD
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Known secondary structure (DSSP)




T
GGGGTTT

TTSGGGS
TTT


TS
BTTB
T
 .........80.........90.........100.........110.........120.........130.........140
Sequence IAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFG
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Known secondary structure (DSSP) TT
T

B

SSSB
TT
TT

TT





SSS



S

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence ELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAK
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Known secondary structure (DSSP) SSTT

SS



TT


TTS



SS
 .........220.........230.........240.........250...
Sequence LFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIADAA
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Known secondary structure (DSSP)
TT

GGG


TTS

TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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