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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c2rfaA_ | PDB header: membrane protein | Chain: A: PDB Molecule: transient receptor potential cation channel | PDBTitle: crystal structure of the mouse trpv6 ankyrin repeat domain |
Added to library: Tue Mar 16 14:24:27 2010 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | I | W | E | S | P | L | L | L | A | A | K | E | N | D | V | Q | A | L | S | K | L | L | K | F | E | G | C | E | V | H | Q | R | G | A | M | G | E | T | A | L | H | I | A | A | L | Y | D | N | L | E | A | A | M | V | L | M | E | A | A | P | E | L | V | F | E | P | M | T | S | E |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | S | T | T | T | T | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | G | G | G | G | G | S | T |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | L | Y | E | G | Q | T | A | L | H | I | A | V | I | N | Q | N | V | N | L | V | R | A | L | L | A | R | G | A | S | V | S | A | R | A | T | G | S | V | F | H | Y | R | P | H | N | L | I | Y | Y | G | E | H | P | L | S | F | A | A | C | V | G | S | E | E | I | V | R | L | L | I |
Predicted secondary structure | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | T | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | T | S | G | G | G | S | T | T | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
Sequence | E | H | G | A | D | I | R | A | Q | D | S | L | G | N | T | V | L | H | I | L | I | L | Q | P | N | K | T | F | A | C | Q | M | Y | N | L | L | L | S | Y | D | G | G | D | H | L | K | S | L | E | L | V | P | N | N | Q | G | L | T | P | F | K | L | A | G | V | E | G | N | I | V |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | T | T | T | T | T | T | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | S | S | S | G | G | G | T | T | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 220 | . | . | ||||||
Sequence | M | F | Q | H | L | M | Q | K | R | K | H | I | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() |
Download: | PDB structure | FASTA sequence |
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