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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3v30A_

Fold library idPDB HeaderMoleculeTitle
c3v30A_PDB header: protein bindingChain: A: PDB Molecule: dna-binding protein rfxank;PDBTitle: crystal structure of the peptide bound complex of the ankyrin repeat2 domains of human rfxank


Added to library: Sat Apr 7 18:18:47 2012
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESAL
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Known secondary structure (DSSP)

TT
TT
SGGGG


TTS

TT
T

TT


TT


 .........80.........90.........100.........110.........120.........130.........140
Sequence SLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAV
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Known secondary structure (DSSP) TT
TTT

TT


TTS

TT
TT

TT


TTS

 .........150.........160.
Sequence ALGYRKVQQVIENHILKLFQS
Predicted secondary structure




SS confidence




















Known secondary structure (DSSP) T
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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