Phyre Home Retrieve Phyre Job Id
Emaill.a.kelley@imperial.ac.uk
DescriptionA0MZ66
DateSat Jun 16 10:26:01 BST 2012
Unique Job ID9a279396d7ab0d93

Summary 

Top model
Image coloured by rainbow N → C terminus
Model (left) based on template c1ciiA_
Top template information
PDB header:transmembrane protein
Chain: A: PDB Molecule:colicin ia;
PDBTitle: colicin ia
Confidence and coverage
Confidence: 97.4% Coverage: 63%
398 residues ( 63% of your sequence) have been modelled with 97.4% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
3D viewing
Interactive 3D view in Jmol

Sequence analysis 

Secondary structure and disorder prediction 

   1........10.........20.........30.........40.........50.........60
Sequence  MNSSDEEKQLQLITSLKEQAIGEYEDLRAENQKTKEKCDKIRQERDEAVKKLEEFQKISH
Secondary structure 
SS confidence 
Disorder  ????
Disorder confidence 
 
   .........70.........80.........90.........100.........110.........120
Sequence  MVIEEVNFMQNHLEIEKTCRESAEALATKLNKENKTLKRISMLYMAKLGPDVITEEINID
Secondary structure 
SS confidence 
Disorder 
Disorder confidence 
 
   .........130.........140.........150.........160.........170.........180
Sequence  DEDSTTDTDGAAETCVSVQCQKQIKELRDQIVSVQEEKKILAIELENLKSKLVEVIEEVN
Secondary structure 
SS confidence 
Disorder 
Disorder confidence 
 
   .........190.........200.........210.........220.........230.........240
Sequence  KVKQEKTVLNSEVLEQRKVLEKCNRVSMLAVEEYEEMQVNLELEKDLRKKAESFAQEMFI
Secondary structure 
SS confidence 
Disorder 
Disorder confidence 
 
   .........250.........260.........270.........280.........290.........300
Sequence  EQNKLKRQSHLLLQSSIPDQQLLKALDENAKLTQQLEEERIQHQQKVKELEEQLENETLH
Secondary structure 
SS confidence 
Disorder 
?
Disorder confidence 
 
   .........310.........320.........330.........340.........350.........360
Sequence  KEIHNLKQQLELLEEDKKELELKYQNSEEKARNLKHSVDELQKRVNQSENSVPPPPPPPP
Secondary structure 
SS confidence 
Disorder 
??????????
Disorder confidence 
 
   .........370.........380.........390.........400.........410.........420
Sequence  PLPPPPPNPIRSLMSMIRKRSHPSGSGAKKEKATQPETTEEVTDLKRQAVEEMMDRIKKG
Secondary structure 
SS confidence 
Disorder  ?????????
???????
?????
???
Disorder confidence 
 
   .........430.........440.........450.........460.........470.........480
Sequence  VHLRPVNQTARPKTKPESSKGCESAVDELKGILGTLNKSTSSRSLKSLDPENSETELERI
Secondary structure 
SS confidence 
Disorder 
??????
?
?????
??????????????????
Disorder confidence 
 
   .........490.........500.........510.........520.........530.........540
Sequence  LRRRKVTAEADSSSPTGILATSESKSMPVLGSVSSVTKTALNKKTLEAEFNSPSPPTPEP
Secondary structure 
SS confidence 
Disorder 
?????????????????
?????????
?????????????????????
Disorder confidence 
 
   .........550.........560.........570.........580.........590.........600
Sequence  GEGPRKLEGCTSSKVTFQPPSSIGCRKKYIDGEKQAEPVVVLDPVSTHEPQTKDQVAEKD
Secondary structure 
SS confidence 
Disorder  ???
??????????
???
?
????
???????????????
Disorder confidence 
 
   .........610.........620.........630.
Sequence  PTQHKEDEGEIQPENKEDSIENVRETDSSNC
Secondary structure 
SS confidence 
Disorder  ??????????????????
???????
Disorder confidence 
 

Confidence Key
High(9)                    Low (0)
?Disordered
Alpha helix
Beta strand

Domain analysis 

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

RankAligned region

PDB 1cii chain A

3D model

Region: 2 - 400
Aligned: 398
Modelled: 399
Confidence: 97.4%
Identity: 8%
PDB header:transmembrane protein
Chain: A: PDB Molecule:colicin ia;
PDBTitle: colicin ia

Phyre2

PDB 1c1g chain A

3D model

Region: 4 - 287
Aligned: 283
Modelled: 284
Confidence: 95.9%
Identity: 12%
PDB header:contractile protein
Chain: A: PDB Molecule:tropomyosin;
PDBTitle: crystal structure of tropomyosin at 7 angstroms resolution2 in the spermine-induced crystal form

Phyre2

PDB 2efr chain B

3D model

Region: 4 - 156
Aligned: 152
Modelled: 153
Confidence: 95.4%
Identity: 7%
PDB header:contractile protein
Chain: B: PDB Molecule:general control protein gcn4 and tropomyosin 1 alpha chain;
PDBTitle: crystal structure of the c-terminal tropomyosin fragment with n- and2 c-terminal extensions of the leucine zipper at 1.8 angstroms3 resolution

Phyre2

PDB 2fxm chain B

3D model

Region: 4 - 114
Aligned: 111
Modelled: 111
Confidence: 95.3%
Identity: 8%
PDB header:contractile protein
Chain: B: PDB Molecule:myosin heavy chain, cardiac muscle beta isoform;
PDBTitle: structure of the human beta-myosin s2 fragment

Phyre2

PDB 3ol1 chain A

3D model

Region: 11 - 109
Aligned: 99
Modelled: 99
Confidence: 94.8%
Identity: 13%
PDB header:structural protein
Chain: A: PDB Molecule:vimentin;
PDBTitle: crystal structure of vimentin (fragment 144-251) from homo sapiens,2 northeast structural genomics consortium target hr4796b

Phyre2

PDB 3u59 chain C

3D model

Region: 6 - 99
Aligned: 94
Modelled: 94
Confidence: 94.7%
Identity: 24%
PDB header:contractile protein
Chain: C: PDB Molecule:tropomyosin beta chain;
PDBTitle: n-terminal 98-aa fragment of smooth muscle tropomyosin beta

Phyre2

PDB 3q8t chain B

3D model

Region: 8 - 97
Aligned: 90
Modelled: 90
Confidence: 94.5%
Identity: 10%
PDB header:apoptosis
Chain: B: PDB Molecule:beclin-1;
PDBTitle: crystal structure of the coiled coil domain of beclin 1, an essential2 autophagy protein

Phyre2

PDB 1bg1 chain A

3D model

Region: 3 - 167
Aligned: 165
Modelled: 165
Confidence: 94.0%
Identity: 7%
PDB header:transcription/dna
Chain: A: PDB Molecule:protein (transcription factor stat3b);
PDBTitle: transcription factor stat3b/dna complex

Phyre2

PDB 1deq chain F

3D model

Region: 12 - 115
Aligned: 104
Modelled: 104
Confidence: 93.6%
Identity: 8%
PDB header:
PDB COMPND:

Phyre2

PDB 3ghg chain K

3D model

Region: 13 - 126
Aligned: 114
Modelled: 114
Confidence: 92.8%
Identity: 11%
PDB header:blood clotting
Chain: K: PDB Molecule:fibrinogen beta chain;
PDBTitle: crystal structure of human fibrinogen

Phyre2

PDB 1bf5 chain A

3D model

Region: 15 - 174
Aligned: 160
Modelled: 160
Confidence: 92.7%
Identity: 6%
PDB header:gene regulation/dna
Chain: A: PDB Molecule:signal transducer and activator of transcription
PDBTitle: tyrosine phosphorylated stat-1/dna complex

Phyre2

PDB 2d3e chain D

3D model

Region: 4 - 128
Aligned: 125
Modelled: 125
Confidence: 92.2%
Identity: 9%
PDB header:contractile protein
Chain: D: PDB Molecule:general control protein gcn4 and tropomyosin 1
PDBTitle: crystal structure of the c-terminal fragment of rabbit2 skeletal alpha-tropomyosin

Phyre2

PDB 2gl2 chain B

3D model

Region: 4 - 106
Aligned: 103
Modelled: 103
Confidence: 92.2%
Identity: 7%
PDB header:cell adhesion
Chain: B: PDB Molecule:adhesion a;
PDBTitle: crystal structure of the tetra muntant (t66g,r67g,f68g,2 y69g) of bacterial adhesin fada

Phyre2

PDB 1deq chain O

3D model

Region: 3 - 104
Aligned: 102
Modelled: 102
Confidence: 92.1%
Identity: 8%
PDB header:
PDB COMPND:

Phyre2

PDB 3oja chain B

3D model

Region: 4 - 146
Aligned: 143
Modelled: 143
Confidence: 91.9%
Identity: 11%
PDB header:protein binding
Chain: B: PDB Molecule:anopheles plasmodium-responsive leucine-rich repeat protein
PDBTitle: crystal structure of lrim1/apl1c complex

Phyre2

PDB 3r6n chain A

3D model

Region: 19 - 338
Aligned: 320
Modelled: 320
Confidence: 89.7%
Identity: 6%
PDB header:cell adhesion
Chain: A: PDB Molecule:desmoplakin;
PDBTitle: crystal structure of a rigid four spectrin repeat fragment of the2 human desmoplakin plakin domain

Phyre2

PDB 2oev chain A

3D model

Region: 331 - 597
Aligned: 267
Modelled: 267
Confidence: 89.1%
Identity: 8%
PDB header:protein transport
Chain: A: PDB Molecule:programmed cell death 6-interacting protein;
PDBTitle: crystal structure of alix/aip1

Phyre2

PDB 1ei3 chain E

3D model

Region: 3 - 115
Aligned: 111
Modelled: 113
Confidence: 86.9%
Identity: 8%
PDB header:
PDB COMPND:

Phyre2

PDB 3o0z chain D

3D model

Region: 4 - 155
Aligned: 152
Modelled: 152
Confidence: 84.6%
Identity: 13%
PDB header:transferase
Chain: D: PDB Molecule:rho-associated protein kinase 1;
PDBTitle: crystal structure of a coiled-coil domain from human rock i

Phyre2

PDB 3na7 chain A

3D model

Region: 2 - 167
Aligned: 166
Modelled: 166
Confidence: 84.3%
Identity: 5%
PDB header:gene regulation, chaperone
Chain: A: PDB Molecule:hp0958;
PDBTitle: 2.2 angstrom structure of the hp0958 protein from helicobacter pylori2 ccug 17874

Phyre2
1
c1ciiA_
2
c1c1gA_
3
c2efrB_
4
c2fxmB_
5
c3ol1A_
6
c3u59C_
7
c3q8tB_
8
c1bg1A_
9
c1deqF_
10
c3ghgK_
11
c1bf5A_
12
c2d3eD_
13
c2gl2B_
14
c1deqO_
15
c3ojaB_
16
c3r6nA_
17
c2oevA_
18
c1ei3E_
19
c3o0zD_
20
c3na7A_
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
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84



Detailed template information 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c1ciiA_
97.4 8 PDB header:transmembrane protein
Chain: A: PDB Molecule:colicin ia;
PDBTitle: colicin ia
2c1c1gA_
95.9 12 PDB header:contractile protein
Chain: A: PDB Molecule:tropomyosin;
PDBTitle: crystal structure of tropomyosin at 7 angstroms resolution2 in the spermine-induced crystal form
3c2efrB_
95.4 7 PDB header:contractile protein
Chain: B: PDB Molecule:general control protein gcn4 and tropomyosin 1 alpha chain;
PDBTitle: crystal structure of the c-terminal tropomyosin fragment with n- and2 c-terminal extensions of the leucine zipper at 1.8 angstroms3 resolution
4c2fxmB_
95.3 8 PDB header:contractile protein
Chain: B: PDB Molecule:myosin heavy chain, cardiac muscle beta isoform;
PDBTitle: structure of the human beta-myosin s2 fragment
5c3ol1A_
94.8 13 PDB header:structural protein
Chain: A: PDB Molecule:vimentin;
PDBTitle: crystal structure of vimentin (fragment 144-251) from homo sapiens,2 northeast structural genomics consortium target hr4796b
6c3u59C_
94.7 24 PDB header:contractile protein
Chain: C: PDB Molecule:tropomyosin beta chain;
PDBTitle: n-terminal 98-aa fragment of smooth muscle tropomyosin beta
7c3q8tB_
94.5 10 PDB header:apoptosis
Chain: B: PDB Molecule:beclin-1;
PDBTitle: crystal structure of the coiled coil domain of beclin 1, an essential2 autophagy protein
8c1bg1A_
94.0 7 PDB header:transcription/dna
Chain: A: PDB Molecule:protein (transcription factor stat3b);
PDBTitle: transcription factor stat3b/dna complex
9c1deqF_
93.6 8 PDB header:
PDB COMPND:
10c3ghgK_
92.8 11 PDB header:blood clotting
Chain: K: PDB Molecule:fibrinogen beta chain;
PDBTitle: crystal structure of human fibrinogen
11c1bf5A_
92.7 6 PDB header:gene regulation/dna
Chain: A: PDB Molecule:signal transducer and activator of transcription
PDBTitle: tyrosine phosphorylated stat-1/dna complex
12c2d3eD_
92.2 9 PDB header:contractile protein
Chain: D: PDB Molecule:general control protein gcn4 and tropomyosin 1
PDBTitle: crystal structure of the c-terminal fragment of rabbit2 skeletal alpha-tropomyosin
13c2gl2B_
92.2 7 PDB header:cell adhesion
Chain: B: PDB Molecule:adhesion a;
PDBTitle: crystal structure of the tetra muntant (t66g,r67g,f68g,2 y69g) of bacterial adhesin fada
14c1deqO_
92.1 8 PDB header:
PDB COMPND:
15c3ojaB_
91.9 11 PDB header:protein binding
Chain: B: PDB Molecule:anopheles plasmodium-responsive leucine-rich repeat protein
PDBTitle: crystal structure of lrim1/apl1c complex
16c3r6nA_
89.7 6 PDB header:cell adhesion
Chain: A: PDB Molecule:desmoplakin;
PDBTitle: crystal structure of a rigid four spectrin repeat fragment of the2 human desmoplakin plakin domain
17c2oevA_
89.1 8 PDB header:protein transport
Chain: A: PDB Molecule:programmed cell death 6-interacting protein;
PDBTitle: crystal structure of alix/aip1
18c1ei3E_
86.9 8 PDB header:
PDB COMPND:
19c3o0zD_
84.6 13 PDB header:transferase
Chain: D: PDB Molecule:rho-associated protein kinase 1;
PDBTitle: crystal structure of a coiled-coil domain from human rock i
20c3na7A_
84.3 5 PDB header:gene regulation, chaperone
Chain: A: PDB Molecule:hp0958;
PDBTitle: 2.2 angstrom structure of the hp0958 protein from helicobacter pylori2 ccug 17874
21c2b9cA_
not modelled 84.1 15 PDB header:contractile protein
Chain: A: PDB Molecule:striated-muscle alpha tropomyosin;
PDBTitle: structure of tropomyosin's mid-region: bending and binding2 sites for actin
22c1ei3C_
not modelled 80.6 6 PDB header:
PDB COMPND:
23c3hnwB_
not modelled 79.4 17 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a basic coiled-coil protein of unknown function2 from eubacterium eligens atcc 27750
24c2v71A_
not modelled 78.7 13 PDB header:nuclear protein
Chain: A: PDB Molecule:nuclear distribution protein nude-like 1;
PDBTitle: coiled-coil region of nudel
25c3dtpA_
not modelled 69.3 11 PDB header:contractile protein
Chain: A: PDB Molecule:myosin 2 heavy chain chimera of smooth and
PDBTitle: tarantula heavy meromyosin obtained by flexible docking to2 tarantula muscle thick filament cryo-em 3d-map
26c2jeeA_
not modelled 63.9 24 PDB header:cell cycle
Chain: A: PDB Molecule:yiiu;
PDBTitle: xray structure of e. coli yiiu
27c3ipkA_
not modelled 63.1 9 PDB header:cell adhesion
Chain: A: PDB Molecule:agi/ii;
PDBTitle: crystal structure of a3vp1 of agi/ii of streptococcus mutans
28c3vkhD_
not modelled 53.7 11 PDB header:motor protein
Chain: D: PDB Molecule:dynein heavy chain, cytoplasmic;
PDBTitle: crystal structure of an motor protein
29c2v66C_
not modelled 49.3 13 PDB header:structural protein
Chain: C: PDB Molecule:nuclear distribution protein nude-like 1;
PDBTitle: crystal structure of the coiled-coil domain of ndel1 (a.a.2 58 to 169)c
30c3cwgA_
not modelled 46.3 9 PDB header:transcription
Chain: A: PDB Molecule:signal transducer and activator of transcription
PDBTitle: unphosphorylated mouse stat3 core fragment
31c1jchC_
not modelled 45.5 9 PDB header:ribosome inhibitor, hydrolase
Chain: C: PDB Molecule:colicin e3;
PDBTitle: crystal structure of colicin e3 in complex with its immunity protein
32c1l8dB_
not modelled 44.9 15 PDB header:replication
Chain: B: PDB Molecule:dna double-strand break repair rad50 atpase;
PDBTitle: rad50 coiled-coil zn hook
33c3a7pB_
not modelled 43.4 8 PDB header:protein transport
Chain: B: PDB Molecule:autophagy protein 16;
PDBTitle: the crystal structure of saccharomyces cerevisiae atg16
34c3u1aC_
not modelled 40.0 18 PDB header:contractile protein
Chain: C: PDB Molecule:smooth muscle tropomyosin alpha;
PDBTitle: n-terminal 81-aa fragment of smooth muscle tropomyosin alpha
35c3hizB_
not modelled 39.7 10 PDB header:transferase/oncoprotein
Chain: B: PDB Molecule:phosphatidylinositol 3-kinase regulatory subunit
PDBTitle: crystal structure of p110alpha h1047r mutant in complex with2 nish2 of p85alpha
36c4a55B_
not modelled 39.4 13 PDB header:transferase
Chain: B: PDB Molecule:phosphatidylinositol 3-kinase regulatory subunit alpha;
PDBTitle: crystal structure of p110alpha in complex with ish2 of p85alpha and2 the inhibitor pik-108
37c2wpqA_
not modelled 32.6 6 PDB header:membrane protein
Chain: A: PDB Molecule:trimeric autotransporter adhesin fragment;
PDBTitle: salmonella enterica sada 479-519 fused to gcn4 adaptors (2 sadak3, in-register fusion)
38c2y3aB_
not modelled 28.6 11 PDB header:transferase
Chain: B: PDB Molecule:phosphatidylinositol 3-kinase regulatory subunit beta;
PDBTitle: crystal structure of p110beta in complex with icsh2 of p85beta and2 the drug gdc-0941
39c2oexB_
not modelled 25.1 7 PDB header:protein transport
Chain: B: PDB Molecule:programmed cell death 6-interacting protein;
PDBTitle: structure of alix/aip1 v domain
40c1gk4A_
not modelled 20.6 12 PDB header:vimentin
Chain: A: PDB Molecule:vimentin;
PDBTitle: human vimentin coil 2b fragment (cys2)
41c2v4hA_
not modelled 18.6 18 PDB header:transcription
Chain: A: PDB Molecule:nf-kappa-b essential modulator;
PDBTitle: nemo cc2-lz domain - 1d5 darpin complex
42c3ojaA_
not modelled 18.2 10 PDB header:protein binding
Chain: A: PDB Molecule:leucine-rich immune molecule 1;
PDBTitle: crystal structure of lrim1/apl1c complex
43c1deqD_
not modelled 17.8 12 PDB header:
PDB COMPND:
44c2no2A_
not modelled 17.2 20 PDB header:cell adhesion
Chain: A: PDB Molecule:huntingtin-interacting protein 1;
PDBTitle: crystal structure of the dllrkn-containing coiled-coil2 domain of huntingtin-interacting protein 1
45c2zvnF_
not modelled 15.8 17 PDB header:signaling protein/transcription
Chain: F: PDB Molecule:nf-kappa-b essential modulator;
PDBTitle: nemo cozi domain incomplex with diubiquitin in p2121212 space group
46c3qh9A_
not modelled 15.3 21 PDB header:structural protein
Chain: A: PDB Molecule:liprin-beta-2;
PDBTitle: human liprin-beta2 coiled-coil
47c1gk7A_
not modelled 14.9 18 PDB header:vimentin
Chain: A: PDB Molecule:vimentin;
PDBTitle: human vimentin coil 1a fragment (1a)
48c3oa7A_
not modelled 14.2 18 PDB header:structural protein
Chain: A: PDB Molecule:head morphogenesis protein, chaotic nuclear migration
PDBTitle: structure of the c-terminal domain of cnm67, a core component of the2 spindle pole body of saccharomyces cerevisiae
49c1ic2B_
not modelled 13.8 23 PDB header:contractile protein
Chain: B: PDB Molecule:tropomyosin alpha chain, skeletal muscle;
PDBTitle: deciphering the design of the tropomyosin molecule
50c3m9bK_
not modelled 13.1 15 PDB header:chaperone
Chain: K: PDB Molecule:proteasome-associated atpase;
PDBTitle: crystal structure of the amino terminal coiled coil domain and the2 inter domain of the mycobacterium tuberculosis proteasomal atpase mpa
51c3l9oA_
not modelled 12.9 20 PDB header:hydrolase
Chain: A: PDB Molecule:atp-dependent rna helicase dob1;
PDBTitle: crystal structure of mtr4, a co-factor of the nuclear exosome
52c3q0xA_
not modelled 12.8 12 PDB header:structural protein
Chain: A: PDB Molecule:centriole protein;
PDBTitle: n-terminal coiled-coil dimer domain of c. reinhardtii sas-6 homolog2 bld12p
53c1y4cA_
not modelled 12.5 12 PDB header:de novo protein
Chain: A: PDB Molecule:maltose binding protein fused with designed
PDBTitle: designed helical protein fusion mbp
54c1ci6A_
not modelled 12.2 26 PDB header:transcription
Chain: A: PDB Molecule:transcription factor atf-4;
PDBTitle: transcription factor atf4-c/ebp beta bzip heterodimer
55c3tnfB_
not modelled 12.2 10 PDB header:protein transport
Chain: B: PDB Molecule:lida;
PDBTitle: lida from legionella in complex with active rab8a
56c3movB_
not modelled 11.9 16 PDB header:structural protein
Chain: B: PDB Molecule:lamin-b1;
PDBTitle: crystal structure of human lamin-b1 coil 2 segment
57c1x8yA_
not modelled 11.6 15 PDB header:structural protein
Chain: A: PDB Molecule:lamin a/c;
PDBTitle: human lamin coil 2b
58c1cz7C_
not modelled 11.4 12 PDB header:contractile protein
Chain: C: PDB Molecule:microtubule motor protein ncd;
PDBTitle: the crystal structure of a minus-end directed microtubule2 motor protein ncd reveals variable dimer conformations
59c1yvlB_
not modelled 10.9 7 PDB header:signaling protein
Chain: B: PDB Molecule:signal transducer and activator of transcription
PDBTitle: structure of unphosphorylated stat1
60c1fosF_
not modelled 10.6 13 PDB header:transcription/dna
Chain: F: PDB Molecule:c-jun proto-oncogene protein;
PDBTitle: two human c-fos:c-jun:dna complexes
61c2w83C_
not modelled 10.6 16 PDB header:protein transport
Chain: C: PDB Molecule:c-jun-amino-terminal kinase-interacting protein
PDBTitle: crystal structure of the arf6 gtpase in complex with a2 specific effector, jip4
62c4e61A_
not modelled 10.1 18 PDB header:cell cycle
Chain: A: PDB Molecule:protein bim1;
PDBTitle: crystal structure of the eb1-like motif of bim1p
63c2wt7B_
not modelled 10.1 21 PDB header:transcription
Chain: B: PDB Molecule:transcription factor mafb;
PDBTitle: crystal structure of the bzip heterodimeric complex2 mafb:cfos bound to dna
64c3n4xB_
not modelled 9.9 11 PDB header:replication
Chain: B: PDB Molecule:monopolin complex subunit csm1;
PDBTitle: structure of csm1 full-length
65c2yy0D_
not modelled 9.8 36 PDB header:transcription
Chain: D: PDB Molecule:c-myc-binding protein;
PDBTitle: crystal structure of ms0802, c-myc-1 binding protein domain2 from homo sapiens
66c3mudA_
not modelled 8.4 12 PDB header:contractile protein
Chain: A: PDB Molecule:dna repair protein xrcc4, tropomyosin alpha-1 chain;
PDBTitle: structure of the tropomyosin overlap complex from chicken smooth2 muscle
67c2rd0B_
not modelled 7.9 16 PDB header:transferase/oncoprotein
Chain: B: PDB Molecule:phosphatidylinositol 3-kinase regulatory subunit alpha;
PDBTitle: structure of a human p110alpha/p85alpha complex
68c2e7sM_
not modelled 7.9 19 PDB header:endocytosis/exocytosis
Chain: M: PDB Molecule:rab guanine nucleotide exchange factor sec2;
PDBTitle: crystal structure of the yeast sec2p gef domain
69c1gk6B_
not modelled 7.9 14 PDB header:vimentin
Chain: B: PDB Molecule:vimentin;
PDBTitle: human vimentin coil 2b fragment linked to gcn4 leucine2 zipper (z2b)
70c1t2kD_
not modelled 7.6 18 PDB header:transcription/dna
Chain: D: PDB Molecule:cyclic-amp-dependent transcription factor atf-2;
PDBTitle: structure of the dna binding domains of irf3, atf-2 and jun2 bound to dna
71c2v1yB_
not modelled 7.6 13 PDB header:transferase
Chain: B: PDB Molecule:phosphatidylinositol 3-kinase regulatory subunit alpha;
PDBTitle: structure of a phosphoinositide 3-kinase alpha adaptor-2 binding domain (abd) in a complex with the ish2 domain3 from p85 alpha
72c1fosE_
not modelled 7.2 15 PDB header:transcription/dna
Chain: E: PDB Molecule:p55-c-fos proto-oncogene protein;
PDBTitle: two human c-fos:c-jun:dna complexes
73c1wt6B_
not modelled 7.2 11 PDB header:transferase
Chain: B: PDB Molecule:myotonin-protein kinase;
PDBTitle: coiled-coil domain of dmpk
74c1gd2G_
not modelled 6.8 15 PDB header:transcription/dna
Chain: G: PDB Molecule:transcription factor pap1;
PDBTitle: crystal structure of bzip transcription factor pap1 bound2 to dna
75c3vkhB_
not modelled 6.5 10 PDB header:motor protein
Chain: B: PDB Molecule:dynein heavy chain, cytoplasmic;
PDBTitle: crystal structure of an motor protein
76c2xdjF_
not modelled 6.2 11 PDB header:unknown function
Chain: F: PDB Molecule:uncharacterized protein ybgf;
PDBTitle: crystal structure of the n-terminal domain of e.coli ybgf
77c2eqbC_
not modelled 6.1 19 PDB header:endocytosis/exocytosis
Chain: C: PDB Molecule:rab guanine nucleotide exchange factor sec2;
PDBTitle: crystal structure of the rab gtpase sec4p, the sec2p gef2 domain, and phosphate complex
78c1n73C_
not modelled 6.0 16 PDB header:blood clotting
Chain: C: PDB Molecule:fibrin gamma chain;
PDBTitle: fibrin d-dimer, lamprey complexed with the peptide ligand: gly-his-2 arg-pro-amide
79c2zdiA_
not modelled 5.8 20 PDB header:chaperone
Chain: A: PDB Molecule:prefoldin subunit beta;
PDBTitle: crystal structure of prefoldin from pyrococcus horikoshii2 ot3
80c2xv5A_
not modelled 5.8 15 PDB header:structural protein
Chain: A: PDB Molecule:lamin-a/c;
PDBTitle: human lamin a coil 2b fragment
81d1ivsa1
not modelled 5.7 11 Fold:Long alpha-hairpin
Superfamily:tRNA-binding arm
Family:Valyl-tRNA synthetase (ValRS) C-terminal domain
82c1debA_
not modelled 5.4 10 PDB header:structural protein
Chain: A: PDB Molecule:adenomatous polyposis coli protein;
PDBTitle: crystal structure of the n-terminal coiled coil domain from2 apc
83c1junB_
not modelled 5.3 14 PDB header:transcription regulation
Chain: B: PDB Molecule:c-jun homodimer;
PDBTitle: nmr study of c-jun homodimer
84d1nkpa_
not modelled 5.2 27 Fold:HLH-like
Superfamily:HLH, helix-loop-helix DNA-binding domain
Family:HLH, helix-loop-helix DNA-binding domain

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