PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3mudA_

Fold library id	PDB Header	Molecule	Title
c3mudA_	PDB header: contractile protein	Chain: A: PDB Molecule: dna repair protein xrcc4, tropomyosin alpha-1 chain;	PDBTitle: structure of the tropomyosin overlap complex from chicken smooth2 muscle

Links to external resources
Added to library: Sun Aug 29 02:09:52 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S G E R K I S R I H L V S E P S I T H F L Q V S W E K T L E S G F V I T L T D G H S A W T G T V S E S E I S Q E A D D M A M E K G K Y V G E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S S
G G G
S S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L R K A L L S G A G P A D V Y T F N F S K E S C Y F F F E K N L K D V S F R L G S F N L E K V E N P A E V I R E L I C Y C L D T T A K N E K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T
T T T
S S
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . .

Sequence S I D D L E E K V A H A K E E N L N M H Q M L D Q T L L E L N N M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	G	E	R	K	I	S	R	I	H	L	V	S	E	P	S	I	T	H	F	L	Q	V	S	W	E	K	T	L	E	S	G	F	V	I	T	L	T	D	G	H	S	A	W	T	G	T	V	S	E	S	E	I	S	Q	E	A	D	D	M	A	M	E	K	G	K	Y	V	G	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T													S	S		G	G	G									S	S																			T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	R	K	A	L	L	S	G	A	G	P	A	D	V	Y	T	F	N	F	S	K	E	S	C	Y	F	F	F	E	K	N	L	K	D	V	S	F	R	L	G	S	F	N	L	E	K	V	E	N	P	A	E	V	I	R	E	L	I	C	Y	C	L	D	T	T	A	K	N	E	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T				T	T									T	T	T										S	S														S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Sequence	S	I	D	D	L	E	E	K	V	A	H	A	K	E	E	N	L	N	M	H	Q	M	L	D	Q	T	L	L	E	L	N	N	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																T