For this study, homologues were defined as pairs of proteins with similar three-dimensional structures, in addition to having other feature suggesting divergence from a common ancestor, such as a common function, conservation of key residues, or unusual features such as left handed beta-alpha-beta supersecondary structures that are unlikely to have arisen twice by chance. Definitions of homologues were taken from SCOP. Any pair of proteins within the same superfamily classification was considered as a homology.
In this study, medium homologues were defined as pairs of homologous proteins having a pairwise sequence identity >25% but <=50%, as caculated using structurally equivalent regions only.
The flat format STAMP file can be viewed by clicking on the file name; the superimposition of C-alpha coordinates by clicking on "View superimposition" (you may have to configure your browser to run RasMol when it finds a PDB file - you may also simply download the file and view it locally).
Identifiers correspond to protein databank (PDB) database codes, postfixed with a chain (where relevant) and with further post-fixing denoting a domain description (an explanation will be added at at a later date).
The pdb coordinates should all contains three chains. Chains "A" and "B" correspond to the two structures in the alignment, chain "Z" to the averaged coordinates, approximately indicating the regions of structural similarity. If you use Rasmol, colour by chain should give a meaningful picture. Within the averaged coordinates, residues are named according to whether or not they are identical in the two structures: either they are named as the identical residue or UNK if the residues are different. If you are interested in seeing which positions have the same amino acid, then if you turn everything off ("wireframe off", "backbone off", etc.), and then do "select **Z" followed by "colour shapely", you will see residues colour either magenta (UNK = not-identical) or other colours indicating the conserved amino acid type.
1abma.1 KHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTA 1idsa.1 aEYTLPDLDWDYGALEPHISGQINELHHSKHHATYVKGANDAVAKLEEARAKEDHSA 1abma.1_ds -------SS-GGGGTTTS-HHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTT-HHH 1idsa.1_ds --------SS-TTTTTTTS-HHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTT--TT Similar -11111111111111111111111111111111111111111111111111111111 1abma.1 QIALQPALKFNGGGHINHSIFWTNLS 1idsa.1 ILLNEKNLAFNLAGHVNHTIWWKNLS 1abma.1_ds HHHHHHHHHHHHHHHHHHHHHHHHB- 1idsa.1_ds HHHHHHHHHHHHHHHHHHHHHHHHB- Similar 11111111111111111111111111
1aboa NLFVALYDFVASGdNTLSITKGEKLRVLGYNHnGEWCEAQt knGQGWVPSNYIT
1shfa vTLFVALYDYEARTeDDLSFHKGEKFQILNSSE GDWWEARslttgETGYIPSNYVA
1aboa_dssp -EEEESS-B---StTB--B-TT-EEEEEEE-TtSSEEEEEe ttEEEEEEGGGEE
1shfa_dssp --EEEESS-B--SSsSB--B-TT-EEEEEE-SS SSEEEEEettt--EEEEEGGGEE
Similar -11111111111110111111111111111111-11111110--0011111111111
1aboa PVn
1shfa PV
1aboa_dssp E--
1shfa_dssp E-
Similar 11-
1ald PYQYpaLTPEQKKELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRR
1fbaa tTYFN yPSKELQDELREIAQKIVAPGKGILAADESGPTMGKRLQDIGVENTEDNRR
1ald_dssp -----sS-HHHHHHHHHHHHHHT-TT-EEEEE---HHHHHHHHHHTT----HHHHH
1fbaa_dssp ----- ---HHHHHHHHHHHHHHT-TT-EEEEE---HHHHHHHHHHTT----HHHHH
Similar -1111-011111111111111111111111111111111111111111111111111
1ald FYRQLLLTADDRVNPCIGGVILFHETLYQKADDGRPFPQVIKSKGGVVGIKVDKGVV
1fbaa AYRQLLFSTDPKLAENISGVILFHETLYQKADDGTPFAEILKKKGIILGIKVDKGVV
1ald_dssp HHHHHHHT--GGGGGGEEEEEE-TTGGG-B-TTS-BHHHHHHHTT-EEEEE----EE
1fbaa_dssp HHHHHHHTS-GGGGGTEEEEEE-HHHHT-B-TTS-BHHHHHHHTT-EEEEE----EE
Similar 111111111111111111111111111111111111111111111111111111111
1ald PLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSALAIMENANVL
1fbaa PLFGSEDEVTTQGLDDLAARCAQYKKDGCDFAKWRCVLKIGKNTPSYQSILENANVL
1ald_dssp E-TTSSS-EEE---TTHHHHHHHHHHTT--EEEEEEEE--STT-S-HHHHHHHHHHH
1fbaa_dssp E-TTSSS-EEE---TTHHHHHHHHHHTTEEEEEEEEEE--SSS-S-HHHHHHHHHHH
Similar 111111111111111111111111111111111111111111111111111111111
1ald ARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHIYLEGTL
1fbaa ARYASICQSQRIVPIVEPEVLPDGDHDLDRAQKVTETVLAAVYKALSDHHVYLEGTL
1ald_dssp HHHHHHHHTTT-EEEEEEEE---SS--HHHHHHHHHHHHHHHHHHHHHTT--GGG-E
1fbaa_dssp HHHHHHHHHTT-EEEEEEEE---SS--HHHHHHHHHHHHHHHHHHHHHTT--GGG-E
Similar 111111111111111111111111111111111111111111111111111111111
1ald LKPNMVTPGHActQKFSHEEIAMATVTALRRTVPPAVTGITFLSGGQSEEEASINLN
1fbaa LKPNMVTAGQS aKKNTPEEIALATVQALRRTVPAAVTGVTFLSGGQSEEEATVNLS
1ald_dssp E--------TT--S---HHHHHHHHHHHHHTTS-TTS-EEEE--TT--HHHHHHHHH
1fbaa_dssp E--------TT s----HHHHHHHHHHHHHHHS-TTS-EEEE--TT--HHHHHHHHH
Similar 11111111111-011111111111111111111111111111111111111111111
1ald AINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGK
1fbaa AINNVPLIRPWALTFSYGRALQASVLRAWAGKKENIAAGQNELLKRAKANGDAAQGK
1ald_dssp HHHH-SS---SEEEEEESHHHHHHHHHHHTT-GGGHHHHHHHHHHHHHHHHHHTTT-
1fbaa_dssp HHTT-SS---SEEEEEESGGGTHHHHHHHTT-STTHHHHHHHHHHHHHHHHHHTTT-
Similar 111111111111111111111111111111111111111111111111111111111
1ald YTPsgqagaaaseSLFVSNha
1fbaa YVAgsa gagsGSLFVAnha
1ald_dssp --Ss-sss----------Ss-
1fbaa_dssp --Tttt -------------
Similar 111000---000011111100-
1ang qdNSRYTHFLTQHYDAKPQGRDDRYCESIMRRRGLTSPCKDINTFIHGNKRSIKAI
1agi aqdDYRYIHFLTQHYDAKPKGRNDEYCFNMMKNRRLTRPCKDRNTFIHGNKNDIKAI
1ang_dssp --SHHHHHHHHHHB-SS-S--SHHHHHHHHHHTTTTTTT-SEEEEE-S-HHHHHGG
1agi_dssp ----HHHHHHHHHHB-SS-S--SHHHHHHHHHHTT-BTTB-SEEEEE-S-HHHHHGG
Similar -00111111111111111111111111111111111111111111111111111111
1ang CENKNGNPHRENLRISKSSFQVTTCKLHGGSPWPPCQYRATAGFRNVVVACENGLPV
1agi CEDRNGQPYRGDLRISKSEFQITICKHKGGSSRPPCRYGATEDSRVIVVGCENGLPV
1ang_dssp GSTTTEEEETTTEEEESS-EEEEEEEE-SS-SSSS--EEEEEEEE--EEEEETTEEE
1agi_dssp GSTTTEEEETTTEEEESS-EEEEEEEE-SS-SSSS--EEEEEEEE--EEEEETTEEE
Similar 111111111111111111111111111111111111111111111111111111111
1ang HLDQSifrR
1agi HFDES fiTpr
1ang_dssp EE-GGgg--
1agi_dssp EE-TT -----
Similar 11111-001--
1ann GGTVKAASGFNAAEDAQTLRKAMKGLGTDEDAIINVLAYRSTAQRQEIRTAYKT
1ala kytRGTVTAFSPFDARADAEALRKAMKGMGTDEETILKILTSRNNAQRQEIASAFKT
1ann_dssp --S----SS--HHHHHHHHHHHHSSSS--HHHHHHHHTTS-HHHHHHHHHHHHH
1ala_dssp -----S----TT--HHHHHHHHHHHHSSSS--HHHHHHHHHHS-HHHHHHHHHHHHH
Similar ---111111111111111111111111111111111111111111111111111111
1ann TIGRDLMDDLKSELSGNFEQVILGMMTPTVLYDVQELRKAMKGAGTDEGCLIEILAS
1ala LFGRDLVDDLKSELTGKFETLMVSLMRPARIFDAHALKHAIKGAGTNEKVLTEILAS
1ann_dssp HH-S-HHHHHHHH--HHHHHHHHHHHS-HHHHHHHHHHHHHSSSS--HHHHHHHHHH
1ala_dssp HHS--HHHHHHHH--HHHHHHHHHHHS-TTTHHHHHHHHHHSSSS--HHHHHHHHHH
Similar 111111111111111111111111111111111111111111111111111111111
1ann RTPEEIRRINQTYQLQYGRSLEDDIRSDTSFMFQRVLVSLSAGGRDESNYLDDALMR
1ala RTPAEVQNIKQVYMQEYEANLEDKITGETSGHFQRLLVVLLQANRDPDGRVEEALVE
1ann_dssp S-HHHHHHHHHHHHHHHSS-HHHHHHHH--HHHHHHHHHHHT-----S----HHHHH
1ala_dssp S-HHHHHHHHHHHHHHHSS-HHHHHHHH--HHHHHHHHHHHT-----S----HHHHH
Similar 111111111111111111111111111111111111111111111111111111111
1ann QDAQDLYEAGEKKWGTDEVKFLTVLCSRNRNHLLHVFDEYKRIAQKDIEQSIksets
1ala KDAQVLFRAGELKWGTDEETFITILGTRSVSHLRRVFDKYMTISGFQIEETIdrets
1ann_dssp HHHHHHHHHHHTTT-S-HHHHHHHHHHS-HHHHHHHHHHHHHHHSS-HHHHHhhh--
1ala_dssp HHHHHHHHHHHTTT-S-HHHHHHHHHHS-HHHHHHHHHHHHHHHSS-GGGGS-sss-
Similar 111111111111111111111111111111111111111111111111111100000
1ann GSFEDALLAIVKCMRNKSAYFAERLYKSMKGLGTDDDTLIRVMVSRAEIDMLDIRAN
1ala GDLEKLLLAVVKCIRSVPAYFAETLYYSMKGAGTDDDTLIRVMVSRSEIDLLDIRHE
1ann_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSS--HHHHHHHHHHHTTTTHHHHHHH
1ala_dssp -HHHHHHHHHHHHHH-HHHHHHHHHHHHHSSSS--HHHHHHHHHHTTTTTHHHHHHH
Similar 111111111111111111111111111111111111111111111111111111111
1ann FKRLYGKSLYSFIKGDTSGDYRKVLLILCGgd
1ala FRKNFAKSLYQMIQKDTSGDYRKALLLLCG
1ann_dssp HHHHHSS-HHHHHHHH--HHHHHHHHHHH-s-
1ala_dssp HHHHHSS-HHHHHHHH--HHHHHHHHHHH-
Similar 111111111111111111111111111111--
1bara PKLLYCSNGGYFLRILPDGTVDGTKDRSDQHIQLQLAAESIGEVYIKSTETGQFLA
2afga kPKLLYCSNGGHFLRILPDGTVDGTRDRSDQHIQLQLSAESVGEVYIKSTETGQYLA
1bara_dssp -EEEEETTTS-EEEE-TTSBEEEES-TT-STT-EEEE-SSTTEEEEEESSS--EEE
2afga_dssp --EEEEETTTTEEEEE-TTS-EEEE--TT-GGGEEEEEESSTTEEEEEETTT--EEE
Similar -11111111111111111111111111111111111111111111111111111111
1bara MDTDGLLYGSQTPNEECLFLERLEENGYNTYISKKHAEKHWFVGLKKNGRSKLGPRT
2afga MDTDGLLYGSQTPNEECLFLERLEENHYNTYISKKHAEKNWFVGLKKNGSCKRGPRT
1bara_dssp E-TT--EEEESS--GGGEEEEEE-SSS-EEEEEGGGGGGT-B--B-TTSBB--GGG-
2afga_dssp E-TTS-EEEESS--GGGEEEEEE-TTS-EEEEESTTGGGT-B--B-SSS-B--TTT-
Similar 111111111111111111111111111111111111111111111111111111111
1bara HFGQKAILFLPLP
2afga HYGQKAILFLPLPv
1bara_dssp -TT-GGG-EEEEE
2afga_dssp -TT-GGG-EEEEE-
Similar 1111111111111-
1bbdl.1 DIVMTQSPSSLTVTTGEKVTMTCKSSQSLLNsrTQKNYLTWYQQKPGQSPKLLIYWA 1dbal.1 DVVMTQIPLSLPVNLGDQASISCRSSQSLIH sNGNTYLHWYLQKPGQSPKLLMYKV 1bbdl.1_ds ----EEE-SEEEEETT-EEEEEEE-SS--EEttTTEE-EEEEEE-TTS--EEEEETT 1dbal.1_ds ---EEEE-SEEEE-TTS-EEEEEEESS--B- tTS-B-EEEEEE-SSS--EEEEETT Similar 1111111111111111111111111111111-0111111111111111111111111 1bbdl.1 STRESGVPDRFTGSGSGTDFTLSISGVQAEDLAVYYCQNNYNYPLTFGAGTKLELk 1dbal.1 SNRFYGVPDRFSGSGSGTDFTLKISRVEAEDLGIYFCSQSSHVPPTFGGGTKLEI 1bbdl.1_ds TEE-TT--SS-EEEEETTEEEEEEES--GGG-EEEEEEE-SSSS--B---EEEEEe 1dbal.1_ds TEE-SS--TTEEEEEETTEEEEEESS--GGG-SEEEEEE-SSSS-EE---EEEEE Similar 1111111111111111111111111111111111111111111111111111111-
1bhp KSCCKSTLGRNCYNLCRARGAQKLCANVCRCKLTSGLSCPKDFP
2plh KSCCRSTLGRNCYNLCRARGAQKLCAGVCRCKISSGLSCPKGFP
1bhp_dssp -EEESSHHHHHHHHHHTTTS-HHHHHHHTTEEE-SSSS--TTS-
2plh_dssp -EEESSHHHHHHHHHHTTTS-HHHHHHHHTEEE-SSSS--SS--
Similar 11111111111111111111111111111111111111111111
1bit IVGGYECKAYSQAHQVSLNSGYHFCGGSLVNENWVVSAAHCYKSRVEVRLGEHNIKV
1brbe IVGGYTCQENSVPYQVSLNSGYHFCGGSLINDQWVVSAAHCYKSRIQVRLGEHNINV
1bit_dssp -BS-EE--TTTTTTEEEEESSSEEEEEEE-SSSEEEE-GGG--S--EEEES-SBTTS
1brbe_dssp -BS-EE--TTS-TTEEEEESSSEEEEEEEEETTEEEE-GGG--SS-EEEES-SBTTS
Similar 111111111111111111111111111111111111111111111111111111111
1bit TEGSEQFISSSRVIRHPNYSSYNIDNDIMLIKLSKPATLNTYVQPVALPTSCAPAGT
1brbe LEGNEQFVNAAKIIKHPNFDRKTLNNDIMLIKLSSPVKLNARVATVALPSSCAPAGT
1bit_dssp --S--EEEEEEEEEE-TT-BTTTTBT--EEEEESS----SSS----B--SS---TT-
1brbe_dssp --S--EEEEEEEEEE-TT--TTT-TT--EEEEESS----SSS----B--SS---TT-
Similar 111111111111111111111111111111111111111111111111111111111
1bit MCTVSGWGNTms stadSNKLQCLNIPILSYSDCNNSYPGMITNAMFCAGYLEGGKD
1brbe QCLISGWGNTlssgvnePDLLQCLDAPLLPQADCEASYPGKITDNMVCVGFLEGGKG
1bit_dssp EEEEEESS---- sss-TTB-EEEEEEB--HHHHHHHSTTT--TTEEEES-TT-S-B
1brbe_dssp EEEEEES----sss----SB-EEEEEEB--HHHHHHHSTTT--TTEEEES-TT-S-B
Similar 111111111100-00001111111111111111111111111111111111111111
1bit SCQGDSGGPVVCNGELQGVVSWGYGCAEPGNPGVYAKVCIFNDWLTSTMAS
1brbe SCQGDSGGPVVCNGELQGIVSWGYGCALPDNPDVYTKVCNYVDWIQDTIAA
1bit_dssp --TT-TT-EEEETTEEEEEEEE-SSSS-TT--EEEEEGGG-HHHHHHHHH-
1brbe_dssp --TT-TT-EEEETTEEEEEEEE-SSSS-TT--EEEEEGGGSHHHHHHHHHH
Similar 111111111111111111111111111111111111111111111111111
1bjma xsVLT QPPSASGTPGQRVTISCSGSSSniGEnSVTWYQHLSGTAPKLLIYEDNSRA
1dfbl.1 diQMTqSPSTLSASVGDRVTITCRASQS ISrWLAWYQQKPGKVPKLLIYKASSLE
1bjma_dssp ---BB --SEEEESTT-EEEEEEE--TTttTTs--EEEEE-SSS---EEEETTTEE-
1dfbl.1_ds ---EEeE-SEEEE-TT--EEEEEEESS- -Tt-EEEEEE-TTS--EEEE-STT-B-
Similar 00111-1111111111111111111111--110111111111111111111111111
1bjma SGVSDRFSASKSGTSASLAISGLQPEDETDYYCAAWddsldVAVFGTGTKVTVLgqp
1dfbl.1 SGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQY nSYSFGPGTKVDIK
1bjma_dssp TT--TTEEEEE-SSEEEEEEET--GGG-SEEEEEEE-sstt-EEEB--EEEEE-ss-
1dfbl.1_ds TT--TTEEEEE-SSEEEEEESS--TT--SEEEEEET tT--B---EEEEE-
Similar 111111111111111111111111111111111111----01111111111111---
1bjma kanptvtlfppsseelqankatlvclisdfypgavtvawkadgspvkagvettkpsk
1dfbl.1
1bjma_dssp -b--eeeee---hhhhhtt-eeeeeeeeeebss--eeeeeesssee-tteee---ee
1dfbl.1_ds
Similar ---------------------------------------------------------
1bjma qsnnkyaassylsltpeqwkshrsyscqvthegstvektvaptec
1dfbl.1
1bjma_dssp -ttsseeeeeeeee-hhhhhtss-eeeeeeetteeeeeee---tt
1dfbl.1_ds
Similar ---------------------------------------------
1bnda GQLSVCDSISEWVtaadKKTAVDMSGGTVTVLEKVPVSKGQLKQYFYETKCNpmgyt
1bet GEFSVCDSVSVWV gdKTTATDIKGKEVTVLAEVNINNSVFRQYFFETKCRasnpv
1bnda_dssp --EESS-EEEEEEehhhH-EEEBTTS-EEEE-SEEE-SSSEEE-EEEEEEE-ttsgg
1bet_dssp ----SS-EEEEEE s---EEEBTTS-EEEE-SEEEETTEEEE--EEEEEES-s-sb
Similar 1111111111111--011111111111111111111111111111111111100000
1bnda keGCRGIDKRHWNSQCRTTQSYVRALTMDSkKRIGWRFIRIDTSCVCTLTI
1bet esGCRGIDSKHWNSYCTTTHTFVKALTTDE KQAAWRFIRIDTACVCVLSRk
1bnda_dssp gsS-TTB-TTTEEEEEEEEEEEEEEEEE-Tt--EEEEEEEEEEEEEEEEEE
1bet_dssp ttBSTT--TTTEEEEEEEEEEEEEEEEE-S S-EEEEEEEEEEEEEEEEEE-
Similar 001111111111111111111111111111-11111111111111111111-
1bsra kesaaakferqhmdsgnspssSSNYCNLMMCCRKMTQGKCKPVNTFVHESLADVKAV
7rsa ketaaakferqhmdsstsaasSSNYCNQMMKSRNLTKDRCKPVNTFVHESLADVQAV
1bsra_dssp ---hhhhhhhhhb---sstt-GGGHHHHHHHHTT-SSSS--SEEEEE-S-HHHHHGG
7rsa_dssp ---hhhhhhhhhb-tt-ss--STTHHHHHHHHTTTTSSS--SEEEEE-S-HHHHHGG
Similar 000000000000000000000111111111111111111111111111111111111
1bsra CSQKKVTCKNGQTNCYQSKSTMRITDCRETGSSKYPNCAYKTTQVEKHIIVACGGKP
7rsa CSQKNVACKNGQTNCYQSYSTMSITDCRETGSSKYPNCAYKTTQANKHIIVACEGNP
1bsra_dssp GGSEEE--TTS-S-EEE-SS-EEEEEEEE-TT-BTTB--EEEEEEEE-EEEEEETTT
7rsa_dssp GGSEEE--TTS-S-EEE-SS-EEEEEEEE-TT-BTTB--EEEEEEEE-EEEEEETTT
Similar 111111111111111111111111111111111111111111111111111111111
1bsra SVPVHFDAS
7rsa YVPVHFDAS
1bsra_dssp TEEEEEEEE
7rsa_dssp TEEEEEEEE
Similar 111111111
1bvc VLSEGEWQLVLHVWAKVEADVAGHGQDILIRLFKSHPETLEKFDRFKHLKTEAEMKA
1emy GLSDGEWELVLKTWGKVEADIPGHGETVFVRLFTGHPETLEKFDKFKHLKTEGEMKA
1bvc_dssp ---HHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHSGGGGGG-TTTTT--SHHHHHH
1emy_dssp ---HHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHH-GGGGGG-TTTTT--SHHHHHT
Similar 111111111111111111111111111111111111111111111111111111111
1bvc SEDLKKHGVTVLTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYLEFISEAIIHV
1emy SEDLKKQGVTVLTALGGILKKKGHHEAEIQPLAQSHATKHKIPIKYLEFISDAIIHV
1bvc_dssp -HHHHHHHHHHHHHHHHHHHTTT--HHHHHHHHHHHHHTT---HHHHHHHHHHHHHH
1emy_dssp -HHHHHHHHHHHHHHHHHHHTTT--HHHHHHHHHHHHHTS---HHHHHHHHHHHHHH
Similar 111111111111111111111111111111111111111111111111111111111
1bvc LHSRHPGDFGADAQGAMNKALELFRKDIAAKYKELGYQ
1emy LQSKHPAEFGADAQGAMKKALELFRNDIAAKYKELGFQ
1bvc_dssp HHHH-TTT--HHHHHHHHHHHHHHHHHHHHHHHHHT--
1emy_dssp HHHHSTTTS-HHHHHHHHHHHHHHHHHHHHHHHHTTS-
Similar 11111111111111111111111111111111111111
1cbs pNFSGNWKIIRSENFEELLKVLGVNVMLRKIAVAAASKPAVEIKQEGDTFYIKTStt
1cbia pNFAGTWKMRSSENFDELLKALGVNAMLRKVAVAAASKPHVEIRQDGDQFYIKTStt
1cbs_dssp ----EEEEEEEEESHHHHHHHTT--HHHHHHHHHHHTS-EEEEEEETTEEEEEEE-s
1cbia_dssp --S-EEEEEEEEESHHHHHHHTT--HHHHHHHHHHTTS-EEEEEEETTEEEEEEE-s
Similar 011111111111111111111111111111111111111111111111111111100
1cbs vrTTEINFKVGEEFEEQTVDGRPCKSLVKWESENKMVCEQKLLKGEGPKTSWTRELt
1cbia vrTTEINFKVGEGFEEETVDGRKCRSLPTWENENKIHCTQTLLEGDGPKTYWTREL
1cbs_dssp s-EEEEEEETTS-EEEE-TTS-EEEEEEEEEETTEEEEEEEESSS----EEEEEEE-
1cbia_dssp s-EEEEEEETTS-EEEE-TTS-EEEEEEEEEETTEEEEEEEESSS----EEEEEEE
Similar 00111111111111111111111111111111111111111111111111111111-
1cbs NDGELILTMTADDVVCTRVYVR
1cbia ANDELILTFGADDVVCTRIYVR
1cbs_dssp TTS-EEEEEEETTEEEEEEEEE
1cbia_dssp ETTEEEEEEEETTEEEEEEEEE
Similar 1111111111111111111111
1cdg.1 TSTTAYQVIQKLAPLRKCNPAIAYGSTQERWINNDVLIYERKFGSNVAVVAVNRNLN 1ciu.1 TSTTAYNVIKKLAPLRKSNPAIAYGTTQQRWINNDVYIYERKFGNNVALVAINRNLS 1cdg.1_dss S-SHHHHHHHHHTTHHHH-HHHHH-EEEEEEE-SSEEEEEEE-SSEEEEEEEE--SS 1ciu.1_dss S-SHHHHHHHHHTTHHHH-HHHHH-EEEEEEE-SSEEEEEEEETTEEEEEEEE--SS Similar 111111111111111111111111111111111111111111111111111111111 1cdg.1 APASISGLVTSLPQGSYNDVLGGLLNGNTLSVGSGGAASNFTLAAGGTAVWQYTA 1ciu.1 TSYNITGLYTALPAGTYTDVLGGLLNGNSISVASDGSVTPFTLSAGEVAVWQYVS 1cdg.1_dss --EEE---B-S--SEEE--TTTTTTS---EEE-GGGBB--EEE-TT-EEEEEEE- 1ciu.1_dss --EEE-S-B-SS-SEEE--TTTTTTB---EEE-TTSBB--EEE-TT-EEEEEE-- Similar 1111111111111111111111111111111111111111111111111111111
1cdka kgseqesVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKE
2cpke VKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKE
1cdka_dssp -thhhhhHHHHHHHHHHHHHHHHHS-------GGGEEEEEEEEE-SS-EEEEEEETT
2cpke_dssp -HHHHHHHHHHHHHHHHS-------GGGEEEEEEEEE-SSEEEEEEEETT
Similar -------11111111111111111111111111111111111111111111111111
1cdka TGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVME
2cpke SGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME
1cdka_dssp T--EEEEEEEEHHHHHHTT-HHHHHHHHHHHHH---TTB--EEEEEE-SSEEEEEE-
2cpke_dssp TTEEEEEEEEEHHHHHHTT-HHHHHHHHHHHHH---TTB--EEEEEE-SSEEEEEEE
Similar 111111111111111111111111111111111111111111111111111111111
1cdka YVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG
2cpke YVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG
1cdka_dssp --TT-BHHHHHHHH-S--HHHHHHHHHHHHHHHHHHHHTTEE----SGGGEEE-TTS
2cpke_dssp --TT-BHHHHHHHH----HHHHHHHHHHHHHHHHHHHHTTEE----SGGGEEE-TTS
Similar 111111111111111111111111111111111111111111111111111111111
1cdka YIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGY
2cpke YIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGY
1cdka_dssp -EEE---TT-EE-SS-B----S-GGG--HHHHTT--B-TTHHHHHHHHHHHHHHHSS
2cpke_dssp -EEE---TT-EE-SS-B----B-GGG--HHHHTT--B-THHHHHHHHHHHHHHHHSS
Similar 111111111111111111111111111111111111111111111111111111111
1cdka PPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIK
2cpke PPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIK
1cdka_dssp -SS--SSHHHHHHHHHH------TTS-HHHHHHHHHHS-SSTTT-TTSSTTTTHHHH
2cpke_dssp -SS--SSHHHHHHHHHH------TTS-HHHHHHHHHHS-S-GGG-TTTSTTTTHHHH
Similar 111111111111111111111111111111111111111111111111111111111
1cdka NHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRVSINEKCGKEFSE
2cpke NHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRVSINEKCGKEFTE
1cdka_dssp TSGGGTT--HHHHHTT-S--S-----SSTT--TTS-----------SS--STGGGTT
2cpke_dssp TSGGGGG--HHHHHTT-S--SS-----STT--TTS-----------SS--STTTTTT
Similar 111111111111111111111111111111111111111111111111111111111
1cgn XFAKPEDAVKYRQSALTLMASHFGRMAPVVKGQAPYDAAQIKANVEVLKTLTALPWA
1cgo XFAKPEDAVKYRQSALTLMASHFGRMTPVVKGQAPYDAAQIKANVEVLKTLTALPWA
1cgn_dssp --SSHHHHHHHHHHHHHHHHHHHHTTHHHHTTSS---HHHHHHHHHHHHHHTTSGGG
1cgo_dssp --SSHHHHHHHHHHHHHHHHHHHHTTHHHHTTSS---HHHHHHHHHHHHHHHHSGGG
Similar 111111111111111111111111111111111111111111111111111111111
1cgn AFGAGTEGGDARPEIWSDAAGFKQKQQAFQDNIVKLSAAADAGDLDKLRAAFGDVGA
1cgo AFGPGTEGGDARPEIWSDAASFKQKQQAFQDNIVKLSAAADAGDLDKLRAAFGDVGA
1cgn_dssp G--TT---TTB-THHHHTHHHHHHHHHHHHHHHHHHHHHHHHT-HHHHHHHHHHHHH
1cgo_dssp GS-TT---TTB-THHHHTHHHHHHHHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHH
Similar 111111111111111111111111111111111111111111111111111111111
1cgn SCKACHDSYR
1cgo SCKACHDAYR
1cgn_dssp HHHHHHHHHB
1cgo_dssp HHHHHHHHHB
Similar 1111111111
1ckia meLRVGNRYRLGRKIGSGSfGDIYLGTDIAAGEEVAIKLECVktKh pQLHIESKIY
1csn NVVGVHYKVGRRIGEGSfGVIFEGTNLLNNQQVAIKFEPR rSdapQLRDEYRTY
1ckia_dssp ---EETTTEEEEEEEEE-SsSEEEEEEETTTTEEEEEEEEES-tTs --HHHHHHHH
1csn_dssp -EETTTEEEEEEEEE-Ss-EEEEEEETTTTEEEEEEEEE- -Tts--HHHHHHHH
Similar --1111111111111111101111111111111111111111-010-0111111111
1ckia KMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMI
1csn KLLAGCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQML
1ckia_dssp HHSTTSTT---EEEEEEETTEEEEEEE----BHHHHHHHTTT---HHHHHHHHHHHH
1csn_dssp HHTTT-TT---EEEEEEETTEEEEEEE----BHHHHHHHTTT---HHHHHHHHHHHH
Similar 111111111111111111111111111111111111111111111111111111111
1ckia SRIEYIHSKNFIHRDVKPDNFLMG lGKKGNLVYIIDFGLAKKYRDARTHQHIPYR
1csn ARVQSIHEKSLVYRDIKPDNFLIGrpnSKNANMIYVVDFGMVKFYRDPVTKQHIPYR
1ckia_dssp HHHHHHHHTTEE-S---GGGEEE- -GGGTT-EEE---SS-EE-B-TTT--B----
1csn_dssp HHHHHHHTTTEE-----GGGEEE--ssSTTTT-EEE---TT-EESB-TTT--B----
Similar 111111111111111111111111--0111111111111111111111111111111
1ckia EnKnlTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQG lkY
1csn EkKnlSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGlkaatnkqkY
1ckia_dssp B--s----SSS--HHHHTTB---HHHHHHHHHHHHHHHHHSS-TT-- --H
1csn_dssp ------S-TTT--HHHHTT----HHHHHHHHHHHHHHHHHSS-TTSS--s--hhhhH
Similar 10100111111111111111111111111111111111111111111-------001
1ckia ERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF
1csn ERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNT
1ckia_dssp HHHHHHHHHS-HHHHTTTS-HHHHHHHHHHHHS-TT----HHHHHHHHHHHHHHHT-
1csn_dssp HHHHHHHHHS-HHHHTTTS-HHHHHHHHHHHH--TT----HHHHHHHHHHHHHHTT-
Similar 111111111111111111111111111111111111111111111111111111111
1ckia SYDYVFDWNMlkfgas
1csn TEDENFDWNL
1ckia_dssp --S---HHHHgggt--
1csn_dssp -S-S--GGG-
Similar 1111111111------
1cphab GIVEQCCASVCSLYQLENYCNFVNQHLCGSHLVEALYLVCGERGFFYTPK 1trzab GIVEQCCTSICSLYQLENYCNFVNQHLCGSHLVEALYLVCGERGFFYTPK 1cphab_dss -HHHHHTTTT--HHHHHTTB---SS---THHHHHHHHHHHGGG-B----- 1trzab_dss -HHHHHTTS---HHHHGGGB----S---THHHHHHHHHHHGGG-EEE--- Similar 11111111111111111111111111111111111111111111111111
1cpn
1gbg qtggsfyepfnnyntglwqkadgysngnmfnctwrannvsmtslgemrlsltspsyn
1cpn_dssp
1gbg_dssp -----eee--ss--ttteee--sb---ttb-see-gggeee-tts-eeeeeeeeett
Similar ---------------------------------------------------------
1cpn FDCAEYRSTNIYGYGLYEVSMKPAKNTGIVSSFFTYTGPAHGTQWDEIDIEFLGKD
1gbg kFDCGENRSVQTYGYGLYEVNMKPAKNVGIVSSFFTYTGPTDGTPWDEIDIEFLGKD
1cpn_dssp -EEEEEEESS-B-SEEEEEEEE----TTEEEEEEEEE-TTSSS--EEEEEEEETT-
1gbg_dssp eEEEEEEEESS-B-SEEEEEEEE----TTEEEEEEEEE-GGGTS--EEEEEEEETT-
Similar -11111111111111111111111111111111111111111111111111111111
1cpn TTKVQFNYYTNGVGGHEKVISLGFDASKGFHTYAFDWQPGYIKWYVDGVLKHTATAN
1gbg TTKVQFNYYTNGVGNHEKIVNLGFDAANSYHTYAFDWQPNSIKWYVDGQLKHTATTQ
1cpn_dssp TTEEEEEEEBTTB----EEEE-SS-GGGS-EEEEEEEETTEEEEEETTEEEEEE-SS
1gbg_dssp TTEEEEEEEBTTB----EEEE-SS-TTTS-EEEEEEEETTEEEEEETTEEEEEE-SS
Similar 111111111111111111111111111111111111111111111111111111111
1cpn IPSTPGKIMMNLWNGTGVDDWLGSYNGANPLYAEYDWVKYTSngsvfwepksyfnps
1gbg IPQTPGKIMMNLWNGAGVDEWLGSYNGVTPLYAHYNWVRYTK
1cpn_dssp ---S-BEEEEEEEEBSS-HHHH--------EEEEEEEEEEEEtteeeee--ss--tt
1gbg_dssp ---S-BEEEEEEEEBSS-HHHH--------EEEEEEEEEEEE
Similar 111111111111111111111111111111111111111111---------------
1cpn twekadgysnggvfnctwrannvnftndgklklglts
1gbg
1cpn_dssp teee--sb---ttb-see-gggeee-tts-eeeeeb-
1gbg_dssp
Similar -------------------------------------
1csee AQTVPYGIPLIKADKVQAQGFKGANVKVAVLDTGIQASHPDLNVVGGASFVAG EAY
1meea AQSVPYGISQIKAPALHSQGYTGSNVKVAVIDSGIDSSHPDLNVRGGASFVPSeTNP
1csee_dssp -----THHHHHTHHHHHHHT---TT-EEEEEES---TT-TT--EEEEEE-STT --T
1meea_dssp -----HHHHHTTHHHHHHHT-S-TT-EEEEEES---TT-TT--EEEEEE-BTTb--T
Similar 11111111111111111111111111111111111111111111111111111-111
1csee NTDGNGHGTHVAGTVAALDNTTGVLGVAPSVSLYAVKVLNSSGSGSYSGIVSGIEWA
1meea YQDGSSHGTHVAGTIAALNNSIGVLGVAPSASLYAVKVLDSTGSGQYSWIINGIEWA
1csee_dssp T--SSSHHHHHHHHHH---SSSS---SSTTSEEEEEE-S-TTSB--HHHHHHHHHHH
1meea_dssp T--TTSSHHHHHHHHH--SSSSS---SSTTSEEEEEE-S-TTSB--HHHHHHHHHHH
Similar 111111111111111111111111111111111111111111111111111111111
1csee TTNGMDVINMSLGGASGSTAMKQAVDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKY
1meea ISNNMDVINMSLGGPTGSTALKTVVDKAVSSGIVVAAAAGNEGSSGSTSTVGYPAKY
1csee_dssp HHTT-SEEEE-EEBSS--HHHHHHHHHHHHHT-EEEEE--S----TT-----BTTTS
1meea_dssp HHTT-SEEEE-EEBSS--HHHHHHHHHHHHTT-EEEEE--S---BTTB----BTTTS
Similar 111111111111111111111111111111111111111111111111111111111
1csee DSVIAVGAVDSNSNRASFSSVGAELEVMAPGAGVYSTYPTNTYATLNGTSMASPHVA
1meea PSTIAVGAVNSANQRASFSSAGSELDVMAPGVSIQSTLPGGTYGAYNGTSMATPHVA
1csee_dssp TTSEEEEEE-TTS-B-TT---STT--EEEE-SSEEEEETTTEEEEE-SHHHHHHHHH
1meea_dssp TTSEEEEEE-TTS-B-TT---STT--EEEE-SSEEEEETTTEEEEE-SHHHHHHHHH
Similar 111111111111111111111111111111111111111111111111111111111
1csee GAAALILSKHPNLSASQVRNRLSSTATYLGSSFYYGKGLINVEAAA
1meea GAAALILSKHPTWTNAQVRDRLESTATYLGSSFYYGKGLINVQAAA
1csee_dssp HHHHHHHHH-TT--HHHHHHHHHHT-B--S-HHHHTT-B--HHHHT
1meea_dssp HHHHHHHHH-TT--HHHHHHHHHHS-B--S-HHHHTT-B--HHHHT
Similar 1111111111111111111111111111111111111111111111
1csh STNLKDVLASLIPKEQARIKTFRQQHGNTAVGQITVDMSYGGMRGMKGLIYETSV
2cts asSTNLKDILADLIPKEQARIKTFRQQHGNTAVGQITVDMMYGGMRGMKGLVYETSV
1csh_dssp ---HHHHHHHHHHHHHHHHHHHHHHHTT-------HHHHHTTTTT-------SEE
2cts_dssp -----HHHHHHHHHHHHHHHHHHHHHHHTT-------HHHHHTTSTT-------S-E
Similar --1111111111111111111111111111111111111111111111111111111
1csh LDPDEGIRFRGFSIPECQKLLPKAGGGEEPLPEGLFWLLVTGQIPTPEQVSWVSKEW
2cts LDPDEGIRFRGYSIPECQKMLPKAKGGEEPLPEGLFWLLVTGQIPTEEQVSWLSKEW
1csh_dssp EETTTEEEETTEEHHHHHHHS-B-TT--SB-HHHHHHHHHHSS---HHHHHHHHHHH
2cts_dssp EETTTEEESSS-BHHHHHHHS-B-SS-SSB-HHHHHHHHHHSS---HHHHHHHHHHH
Similar 111111111111111111111111111111111111111111111111111111111
1csh AKRAALPSHVVTMLDNFPTNLHPMSQLSAAITALNSESNFARAYAEGINRTKYWEFV
2cts AKRAALPSHVVTMLDNFPTNLHPMSQLSAAITALNSESNFARAYAEGIHRTKYWELI
1csh_dssp HHH----HHHHHHHHHS-TTS-HHHHHHHHHHHGGGG-HHHHHHHTT--GGGHHHHH
2cts_dssp HHT----HHHHHHHHH--SSS-HHHHHHHHHHHGGGG-HHHHHHHTT--GGGHHHHH
Similar 111111111111111111111111111111111111111111111111111111111
1csh YEDAMDLIAKLPCVAAKIYRNLYRAGSSIGAIDSKLDWSHNFTNMLGYTDPQFTELM
2cts YEDCMDLIAKLPCVAAKIYRNLYREGSSIGAIDSKLDWSHNFTNMLGYTDAQFTELM
1csh_dssp HHHHHHHHHHHHHHHHHHHHHHHSTT-------TTS-HHHHHHHHHT---HHHHHHH
2cts_dssp HHHHHHHHHHHHHHHHHHHHHHHSTT-------TTS-HHHHHHHHHT---HHHHHHH
Similar 111111111111111111111111111111111111111111111111111111111
1csh RLYLTIHSDHEGGNVSAHTSHLVGSALSDPYLSFAAAMNGLAGPLHGLANQEVLLWL
2cts RLYLTIHSDHEGGNVSAHTSHLVGSALSDPYLSFAAAMNGLAGPLHGLANQEVLVWL
1csh_dssp HHHHHHTS---S-SHHHHHHHHHHTTT--HHHHHHHHHHHHTSTTTTTHHHHHHHHH
2cts_dssp HHHHHHTS--TTTSHHHHHHHHHHTTT--HHHHHHHHHHHHTSTTTTTHHHHHHHHH
Similar 111111111111111111111111111111111111111111111111111111111
1csh SQLQKDLGADASDEKLRDYIWNTLNSGRVVPGYGHAVLRKTDPRYTCQREFALKHLP
2cts TQLQKEVGKDVSDEKLRDYIWNTLNSGRVVPGYGHAVLRKTDPRYTCQREFALKHLP
1csh_dssp HHHHHHTTSS--HHHHHHHHHHHHHTT---TTB--SS--S--HHHHHHHHHHHHH-T
2cts_dssp HHHHHHT-SS--HHHHHHHHHHHHHTT---TTB--SS--S--HHHHHHHHHHHHH-T
Similar 111111111111111111111111111111111111111111111111111111111
1csh SDPMFKLVAQLYKIVPNVLLEQGKAKNPWPNVDAHSGVLLQYYGMTEMNYYTVLFGV
2cts HDPMFKLVAQLYKIVPNVLLEQGKAKNPWPNVDAHSGVLLQYYGMTEMNYYTVLFGV
1csh_dssp T-HHHHHHHHHHHHHHHHHHHHT--S--SB-THHHHHHHHHHTT---GGGHHHHHHH
2cts_dssp T-HHHHHHHHHHHHHHHHHHHTT--S--SB-THHHHHHHHHHTT---GGGHHHHHHH
Similar 111111111111111111111111111111111111111111111111111111111
1csh SRALGVLAQLIWSRALGFPLERPKSMSTAGLEKLSAG
2cts SRALGVLAQLIWSRALGFPLERPKSMSTDGLIKLVDS
1csh_dssp HHHHHHHHHHHHHHHTT----------HHHHHHHH--
2cts_dssp HHHHHHHHHHHHHHHTT----------HHHHHHHHTT
Similar 1111111111111111111111111111111111111
1dhy.1 SIERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAGdAALYRADQRAWRIAVQPGELD 1han.1 SIRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTDnGDLFRIDSRAWRIAVQQGEVD 1dhy.1_dss ---EEEEEEEEES-HHHHHHHHHHTT--EEEEEETtEEEEESSSBS-SEEEEE-SS- 1han.1_dss -EEEEEEEEEEES-HHHHHHHHHHTT--EEEEEETtEEEEESSSBS-SEEEEE-SS- Similar 111111111111111111111111111111111110111111111111111111111 1dhy.1 DLAYAGLEVDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLE 1han.1 DLAFAGYEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLE 1dhy.1_dss EEEEEEEE-SSHHHHHHHHHHHHHTT---EE--HHHHHHTT-SEEEEEE-GGG-EEE 1han.1_dss EEEEEEEEESSHHHHHHHHHHHHHTT---EE--HHHHHHHT-SEEEEEE-TTS-EEE Similar 111111111111111111111111111111111111111111111111111111111 1dhy.1 IYYGPAEIFHEPFLPSa 1han.1 IYYGASEVFEKPFLPG 1dhy.1_dss EEE---B-TTS----Ss 1han.1_dss EEE---B-TTS----S Similar 1111111111111111-
1fha SQVRQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHE
1hrs sSQIRQNYSTEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALEGVCHFFRELAEE
1fha_dssp -TT--S--HHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTT--HHHHHHHHHHHHH
1hrs_dssp --TT--S--HHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTT--HHHHHHHHHHHHH
Similar -11111111111111111111111111111111111111111111111111111111
1fha EREHAEKLMKLQNQRGGRIFLQDIQKPDCDDWESGLNAMECALHLEKNVNQSLLELH
1hrs KREGAERLLKMQNQRGGRALFQDLQKPSQDEWGTTLDAMKAAIVLEKSLNQALLDLH
1fha_dssp HHHHHHHHHHHHHHHT-----------S-S---SHHHHHHHHHHHHHHHHHHHHHHH
1hrs_dssp HHHHHHHHHHHHHHHT-----------S-S---SHHHHHHHHHHHHHHHHHHHHHHH
Similar 111111111111111111111111111111111111111111111111111111111
1fha KLATDKNDPHLCDFIETHYLNEQVKAIKELGDHVTNLRKMGapeSGLAEYLFDKHT
1hrs ALGSAQADPHLCDFLESHFLDEEVKLIKKMGDHLTNIQRLVgsqAGLGEYLFERLTl
1fha_dssp HHHHHTT-HHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTttt-HHHHHHHHHHT
1hrs_dssp HHHHHTT-TTHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTtssHHHHHHHHHHHGg
Similar 11111111111111111111111111111111111111111000111111111111-
1fha
1hrs kh
1fha_dssp
1hrs_dssp gt
Similar --
1fkd GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFMLG
1yat seviegNVKIDRISPGDGATFPKTGDLVTIHYTGTLENGQKFDSSVDRGSPFQCNIG
1fkd_dssp -EEEEEEE---SS----TTSEEEEEEEEEETT--EEEEHHHHT--EEEETT
1yat_dssp -ee-ggG-EEEEEE---SS----TT-EEEEEEEEEETTS-EEEESTTTT--EEEETT
Similar ------111111111111111111111111111111111111111111111111111
1fkd KQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVELLKL
1yat VGQVIKGWDVGIPKLSVGEKARLTIPGPYAYGPRGFPGLIPPNSTLVFDVELLKV
1fkd_dssp SS-S-HHHHHHHTT--TT-EEEEEE-GGGTTTTT-BTTTB-TT--EEEEEEEEEE
1yat_dssp SSSS-HHHHHHGGG--TT-EEEEEE-GGGTTTTT-BTTTB-TT--EEEEEEEEEE
Similar 1111111111111111111111111111111111111111111111111111111
1frd aSYQVRLInkkqDIDTTIEIDEETTILDGAEENGIELPFSCHSGSCSSCVGKVVEGE
1frra AYKTVLK tpSGEFTLDVPEGTTILDAAEEAGYDLPFSCRAGACSSCLGKVVSGS
1frd_dssp -EEEEEEEetttTEEEEEEEETTS-HHHHHHHTT-----SSSSSSSSTTEEEEEES-
1frra_dssp -EEEEEE etTEEEEEEE-TT--HHHHHHHTT-----SSSSSSSSTTEEEEEES-
Similar -1111111--00111111111111111111111111111111111111111111111
1frd VDQSDQIFLDDEQMGKGFALLCVTYPRSNCTIKTHQEPyl
1frra VDESEGSFLDDGQMEEGFVLTCIAIPESDLVIETHKEEel
1frd_dssp EE-TT--S--HHHHHTTEEEGGG-EESSSEEEE---GGg-
1frra_dssp EE-TT--S--HHHHHTTEEETTT-EESS-EEEE---TTtt
Similar 1111111111111111111111111111111111111100
1frgl.1 DIVMTQSPSSLTVTAGEKVTMSCKSSQSLFNSGKRKNFLTWYHQKPGQPPKLLIYWA
2imm DIVMTQSPSSLSVSAGERVTMSCKSSQSLLNSGNQKNFLAWYQQKPGQPPKLLIYGA
1frgl.1_ds ---EEEE-SEEEE-TT--EEEEEEESS--EETTTTEE-EEEEEE-TTS-EEEEEETT
2imm_dssp ---EEEE-SEEEE-TT--EEEEEEESS--EETTTTEE-EEEEEE-TTS--EEEEETT
Similar 111111111111111111111111111111111111111111111111111111111
1frgl.1 STRESGVPDRFSGSGSGTDFTLTITSVQAEDLAIYYCQNDYSHPLTFGAG
2imm STRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCQNDHSYPLTFGAGtklelk
1frgl.1_ds TEE-TTS-TTEEEEEETTEEEEEESS--GGG-SEEEEEE-SSSS--B---
2imm_dssp TEE-TT--TTEEEEEETTEEEEEESS--GGG-EEEEEEE-SSSS-EE---eeeee-
Similar 11111111111111111111111111111111111111111111111111------
1fus xsATTCGSTNYSASQVRAAANAACQYYQNDDtagsSTYPHTYNNYEGFDFPVDGPY
1rms escEYTCGSTCYWSSDVSAAKAKGYSLYESGDt iDDYPHEYHDYEGFDFPVSGTY
1fus_dssp ---EEETTEEE-HHHHHHHHHHHHHHHHTT--sttS--SEEE--TT----SS-S-E
1rms_dssp ---SEEETTEEE-HHHHHHHHHHHHHHHHTT-- bTTBSEEE--TT----SS-S-E
Similar -00111111111111111111111111111110--0111111111111111111111
1fus QEFPIKS GGVYTGGSPGADRVVINTNCEYAGAITHTGASGNNFVGCsgt
1rms YEYPIMSdYDVYTGGSPGADRVIFNGDDELAGVITHTGASGDDFVACss
1fus_dssp EEEE--T TSS--SS---SEEEEEETT--EEEEEESTT-STT--EE-tt-
1rms_dssp EEEE--TtS----SS---SEEEEEETTS-EEEEEESTT-SSS--EE-b-
Similar 1111111-11111111111111111111111111111111111111100-
1gado.1 tIKVGINGFGRIGRIVFRAAQKRsdIEIVAINDLLDADYMAYMLKYDSTHGRFDGTV 1cero.1 MKVGINGFGRIGRQVFRILHSR gVEVALINDLTDNKTLAHLLKYDSIYHRFPGEV 1gado.1_ds -EEEEEE--SHHHHHHHHHHHT-ssEEEEEEE-SS-HHHHHHHHH--TTT-S-SS-E 1cero.1_ds -EEEEE--SHHHHHHHHHHHHH t--EEEEE-SS-HHHHHHHHH--TTT-S-SS-E Similar -1111111111111111111111-011111111111111111111111111111111 1gado.1 EVKDGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAK 1cero.1 AYDDQYLYVDGKAIRATAVKDPKEIPWAEAGVGVVIESTGVFTDADKAKAHLEGGAK 1gado.1_ds EEETTEEEETTEEEEEE--SSGGGG-HHHHT-SEEEE-SSS--SHHHHTHHHHTT-S 1cero.1_ds EE-SSEEEETTEEEEEE--S-GGGS-HHHHTEEEEEE-SSS--BHHHHHTTGGGT-S Similar 111111111111111111111111111111111111111111111111111111111 1gado.1 KVVMTGPSkdnTPMFVKGANFDKYA gQDIVSNASNETGYSNKVLDLIAHIS 1cero.1 KVIITAPAkgeDITIVMGVNHEAYDpsrHHIISNASNEWGYANRVADLVELVLrkg 1gado.1_ds EEEESS--sss--B--TTTTGGG-- s-SEEE---TTHHHHHHHHHHHHHTT 1cero.1_ds EEEESS--bs-SEE--TTTSGGG--ttt--EEE---TTHHHHHHHHHHHHHHHht- Similar 1111111100011111111111111--01111111111111111111111111---
1gd1o.1 AVKVGINGFGRIGRNVFRAALKN pDIEVVAVNDL TDANTLAHLLKYDSVHG 1gypa.1 aPIKVGINGFGRIGRMVFQAICDQgligtEIDVVAVVDMsTNAEYFAYQMKHDTVHG 1gd1o.1_ds -EEEEEE--SHHHHHHHHHHTT- sSEEEEEEE-S S-HHHHHHHHHEETTTE 1gypa.1_ds --EEEEEE--SHHHHHHHHHHHHTt-bttTEEEEEEEES---HHHHHHHHH--TTT- Similar -11111111111111111111111----01111111111-11111111111111111 1gd1o.1 RLDAEVSVN gNNLVVNGKEIIVKAE RDPENLAWGEIGVDIVVESTGRF 1gypa.1 RPKYTVEAVksspsvetaDVLVVNGHRIKCVKAqRNPADLPWGKLGVDYVIESTGLF 1gd1o.1_ds E-SS-EEEE tTEEEETTEEEEEE-- S-GGG--GGGGT--EEEE-SSS- 1gypa.1_ds S-SS-EEEE-ssttsss--EEEETTEEEEEEE--SSGGGS-HHHHT--EEEE-SSS- Similar 111111111--------0111111111111111-11111111111111111111111 1gd1o.1 TKREDAAKHLEAGAKKVIISAPAKNEDITIVMGVNQDKYDPKAHHVISNASNETGYS 1gypa.1 TDKLKAEGHIKGGAKKVVISAPASGGAKTIVMGVNQHEYSPASHHVVSNASNEWAYS 1gd1o.1_ds -BHHHHTHHHHTT-SEEEESS--BS-SEE--TTTSGGG--TTT--EEE---TTHHHH 1gypa.1_ds -BHHHHHHHHHTT-SEEEESS--BSS-EE--TTTTGGG--TTT-SEEE---TTHHHH Similar 111111111111111111111111111111111111111111111111111111111 1gd1o.1 HRVVDLAAYIASKg 1gypa.1 HRVVDLVRYMAAKdaas 1gd1o.1_ds HHHHHHHHHHHHT- 1gypa.1_ds HHHHHHHHHHHHHhhh- Similar 11111111111110---
1gece LPESVDWRAKGAVTPVKHQGYCESCWAFSTVATVEGINKIKTGNLVELSEQELVDCD
1ppn IPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNEYSEQELLDCD
1gece_dssp --S-EETTTTT------B--SSB-HHHHHHHHHHHHHHHHHHS----B-HHHHHHH-
1ppn_dssp --S-EETTTTT------B-TTSB-HHHHHHHHHHHHHHHHHHS----B-HHHHHHH-
Similar 111111111111111111111111111111111111111111111111111111111
1gece LQSYGCNRGYQSTSLQYVAQNGIHLRAKYPYIAKQQTCRANQVGGPKVKTNGVGRVQ
1ppn RRSYGCNGGYPWSALQLVAQYGIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQ
1gece_dssp SSS-TTB---HHHHHHHHHHH-B-BTTTS---SS-----HHHHTS--B---EEEE--
1ppn_dssp TTS-TTB---HHHHHHHHHHT-B-BTTTS---SS-----TGGG-S-SB--SEEEEE-
Similar 111111111111111111111111111111111111111111111111111111111
1gece SNNEGSLLNAIAHQPVSVVVESAGRDFQNYKGGIFEGSCGTKVDHAVTAVGYGksgg
1ppn PYNEGALLYSIANQPVSVVLEAAGKDFQLYRGGIFVGPCGNKVDHAVAAVGYG
1gece_dssp SS-HHHHHHHHTTS-EEEEE---SHHHHT--SSEE--S--S---EEEEEEEEEeett
1ppn_dssp SS-HHHHHHHHHHS-EEEEE---SHHHHT--SSEE--S--S---EEEEEEEEE
Similar 11111111111111111111111111111111111111111111111111111----
1gece kGYILIKNSWGPGWGENGYIRIRRASGNSPGVCGVYRSSYYPIK
1ppn pNYILIKNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFYPVK
1gece_dssp eEEEEEE-SB-TTSTBTTEEEEE---S-TT-GGGTTS--EEEE-
1ppn_dssp tTEEEEE-SB-TTSTBTTEEEEE--S--TT-GGGTTS-EEEEE-
Similar 01111111111111111111111111111111111111111111
1gece LPESVDWRAKGAVTPVKHQGYCESCWAFSTVATVEGINKIKTGNLVELSEQELVDCD
1ppo LPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCE
1gece_dssp --S-EETTTTT------B--SSB-HHHHHHHHHHHHHHHHHHS----B-HHHHHHH-
1ppo_dssp --S-EETTTTT------B--SSB-HHHHHHHHHHHHHHHHHHS----B-HHHHHHH-
Similar 111111111111111111111111111111111111111111111111111111111
1gece LQSYGCNRGYQSTSLQYVAQNGIHLRAKYPYIAKQQTCRANQVGgpKVKTNGVGRVQ
1ppo RRSHGCKGGYPPYALEYVAKNGIHLRSKYPYKAKQGTCRAKQVGgpIVKTSGVGRVQ
1gece_dssp SSS-TTB---HHHHHHHHHHH-B-BTTTS---SS-----HHHHTs--B---EEEE--
1ppo_dssp SSS-TTB---HHHHHHHHHHH-B-BTTTS---SS-----GGG--s--B---EEEE--
Similar 111111111111111111111111111111111111111111110011111111111
1gece SNNEGSLLNAIAHQPVSVVVESAGRDFQNYKGGIFEGSCGTKVDHAVTAVGYGKSGG
1ppo PNNEGNLLNAIAKQPVSVVVESKGRPFQLYKGGIFEGPCGTKVDHAVTAVGYGKSGG
1gece_dssp SS-HHHHHHHHTTS-EEEEE---SHHHHT--SSEE--S--S---EEEEEEEEEEETT
1ppo_dssp SS-HHHHHHHHHHS-EEEEE---SHHHHH--SSEE--S--S---EEEEEEEEEEETT
Similar 111111111111111111111111111111111111111111111111111111111
1gece KGYILIKNSWGPGWGENGYIRIRRAsgnSPGVCGVYRSSYYPIK
1ppo KGYILIKNSWGTAWGEKGYIRIKRApgnSPGVCGLYKSSYYPTK
1gece_dssp EEEEEEE-SB-TTSTBTTEEEEE---s-TT-GGGTTS--EEEE-
1ppo_dssp EEEEEEE-SB-SSSTBTTEEEEE---ssSS-GGGTTS--EEEE-
Similar 11111111111111111111111110001111111111111111
1glqa.1 YGKNQREAAQMDMVNDGVEDLRGKYVTLIYTNYENGKNDYVKALPGHLKPFETLLSQ 1gsra.1 YGKDQKEAALVDMVNDGVEDLRCKYATLIYTNYEAGKEKYVKELPEHLKPFETLLSQ 1glqa.1_ds S-SSHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH 1gsra.1_ds S-SSHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHT Similar 111111111111111111111111111111111111111111111111111111111 1glqa.1 NQGGKAFIVGDQISFADYNLLDLLLIHQVLAPGCLDNFPLLSAYVARLSARPKIKAF 1gsra.1 NQGGQAFVVGSQISFADYNLLDLLRIHQVLNPSCLDAFPLLSAYVARLSARPKIKAF 1glqa.1_ds TGGGTS-SSSSS--HHHHHHHHHHHHHHHHSTTTTTT-HHHHHHHHHHHTSHHHHHH 1gsra.1_ds TGGGTS-SSSSS--HHHHHHHHHHHHHHHH-TTTTTT-HHHHHHHHHHHTSHHHHHH Similar 111111111111111111111111111111111111111111111111111111111 1glqa.1 LSSPEHVNRPINGNGK 1gsra.1 LASPEHVNRPINGNGK 1glqa.1_ds HTSHHHHHS-SSTTS- 1gsra.1_ds HHSTTTTTS-SSSSS- Similar 1111111111111111
1hbq ERDCRVSSFRVKENFDKARFAGTWYAMAKKDPEGLFLQDNIVAEFSVDENGQMSATA
1rbp ERDCRVSSFRVKENFDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSATA
1hbq_dssp -----GGG----TT--TTTT-EEEEEEEEE--TT----EEEEEEEEE-TTS-EEEEE
1rbp_dssp -----GGG----TT--TTTT-EEEEEEEEE--SS----EEEEEEEEE-TTS-EEEEE
Similar 111111111111111111111111111111111111111111111111111111111
1hbq KGRVRLLNNWDVCADMVGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIIDTDYETF
1rbp KGRVRLLNNWDVCADMVGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIVDTDYDTY
1hbq_dssp EEEEE-TTS-EEEEEEEEEEEE-SSTTEEEEEEEESSTTS--EEEEEEEEEE-SSSE
1rbp_dssp EEEEEETTTEEEEEEEEEEEEE-SSTTEEEEEEEESSTTS--EEEEEEEEEE-SSSE
Similar 111111111111111111111111111111111111111111111111111111111
1hbq AVQYSCRLLNLDGTCADSYSFVFARDPSGFSPEVQKIVRQRQEELCLARQYRLIPHN
1rbp AVQYSCRLLNLDGTCADSYSFVFSRDPNGLPPEAQKIVRQRQEELCLARQYRLIVHN
1hbq_dssp EEEEEEEEE-TTSSEEEEEEEEEESSTT---HHHHHHHHHHHHHTT-TT--EE----
1rbp_dssp EEEEEEEEE-TTSSEEEEEEEEEESSTT---HHHHHHHHHHHHHTT-TT--EE----
Similar 111111111111111111111111111111111111111111111111111111111
1hbq GYcn
1rbp GY
1hbq_dssp STtt
1rbp_dssp S-
Similar 11--
1hcqa mketRYCAVCNDYASGYHYGVWSCEGCKAFFKRSIQGhNDYMCPATNQCTIDKNRRK
1lata RPCLVCSDEASGCHYGVLTCEGCKAFFKRAVEGqHNYLCKYEGKCIIDKIRRK
1hcqa_dssp -----B-TTT-SB--EEETTEEE-HHHHHHHHHHHSS------SSSS----STTTTT
1lata_dssp -B-TTT-SB--EEETTEEE-HHHHHHHHHHHHS------SS-S----STTTTT
Similar ----11111111111111111111111111111111111111111111111111111
1hcqa SCQACRLRKCYEVGMM
1lata NCPACRYRKCLQAGMNl
1hcqa_dssp T-HHHHHHHHHHHT--
1lata_dssp T-HHHHHHHHHHTT---
Similar 1111111111111111-
1hila.1 dIVMTQSPSSLTVTAGEKVTMSCTSSQSLFnsgkQKNYLTWYQQKPGQPPKVLIYWA 1ibgl.1 IVLTQSPASLAVSLGQRATISCRASKSVS tsGYSHIHWYQQKPGQPPKLLIYLA 1hila.1_ds ---EEEE-SEEEE-TT--EEEEEEESS--EetttTEE-EEEEEE-TTS--EEEEETT 1ibgl.1_ds --EEEE-SEEEEETT--EEEEEEESS--E etTEE-EEEEEE-TTS--EEEEEGG Similar -11111111111111111111111111111--0111111111111111111111111 1hila.1 STRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCQNDYSNPLTFGGGTKLELk 1ibgl.1 SILESGVPARFSGSGSGTDFTLNIHPVEEEDAATYYCQHSREYPLTFGAGTELEL 1hila.1_ds TEE-TT--TTEEEEEETTEEEEEESS--GGG-SEEEEEE-SSSS-EE---EEEEE- 1ibgl.1_ds GEE-TTS-TTEEEEEETTEEEEEE-S--GGG-SEEEEEE-SSSS--BB--EEEEE Similar 1111111111111111111111111111111111111111111111111111111-
1hpla.1 RWRYRVDVTLSGKKVTGHVLVSLFGNKGNSRQYEIFQGTLKPDNTYSNEFDSDVEVG 1lpbb.1 RWRYKVSVTLSGKKVTGHILVSLFGNKGNSKQYEIFKGTLKPDSTHSNEFDSDVDVG 1hpla.1_ds -EEEEEEEEEEE--EEEEEEEEEEETTEE---EEEEEEEE-SS-EEEEEEEESS--- 1lpbb.1_ds -EEEEEEEEEEE--EEEEEEEEEEETTEE---EEEEEEEE-TT-EEEEEEEESS--- Similar 111111111111111111111111111111111111111111111111111111111 1hpla.1 DLEKVKFIWYNNVINLTLPKVGASKITVERNDGSVFNFCSEETVREDVLLTLTA 1lpbb.1 DLQMVKFIWYNNVINPTLPRVGASKIIVETNVGKQFNFCSPETVREEVLLTLTP 1hpla.1_ds SEEEEEEEEEE-S--TT---EEEEEEEEE-TTS-EEEEE----B-TT--EEEEE 1lpbb.1_ds SEEEEEEEEE-SS--TT---EEEEEEEEEETTS-EEEEE----B-TTS-EEEEE Similar 111111111111111111111111111111111111111111111111111111
1hpt dsLGREAKcYNE LNGCTYEYRPVCGTDGDTYPNECVLCFENRKRQTSILIQKSGP
1tgsi tsPQREAT CTSeVSGCPKIYNPVCGTDGITYSNECVLCSENKKRQTPVLIQKSGP
1hpt_dssp --SSB----TT- SS------B-EEETTS-EESBHHHHHHHHHHHT----EEEES-
1tgsi_dssp -------- ---sSSSEE-----EEETTS-EESSHHHHHHHHHT-SS---EEEES-
Similar 00111111-111-1111111111111111111111111111111111111111111
1igcl.1 NIVMTQSPKSMSMSVGERVTLTCKASENV vTYVSWYQQKPEQSPKLLIYGAS 1plgl.1 DVVMTQTPLSLPVSLGDQASISCRSSQSLvhsngnTYLYWYLQKPGQSPKPLIYRVS 1igcl.1_ds ----EEE-S--EEETT--EEEEEE-SS-- tT-EEEEEE-TTS--EEEEETTT 1plgl.1_ds ---EEEE-SEEEE-TT--EEEEEEESS--b-tts-B-EEEEEE-TTS-EEEEEETTT Similar 11111111111111111111111111111-----01111111111111111111111 1igcl.1 NRYTGVPDRFTGSGSATDFTLTISSVQAEDLADYHCGQGNSYPYTFGGGTKLEIk 1plgl.1 NRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYFCFQGTHVPYTFGGGTRLEI 1igcl.1_ds EE-TT--TT--EEE-SSEEEEEESS--STT-EEEEEEE-SSSS-EE----EEEEe 1plgl.1_ds EE-TT--TTEEEEEETTEEEEEESS--GGG-EEEEEEE-SSSS-EE---EEEEE Similar 111111111111111111111111111111111111111111111111111111-
1igml DIQMTQSPSSLSASVGDRVTITCQASQDISNYLAWYQQKPGKAPELRIYDASNLETG
1ivla DIELTQSPATLSVTPGNSVSISCRASQSIGNRLFWYQQKSHESPRLLIKYASQSISG
1igml_dssp ---EEEE-SEEEE-TT--EEEEEEESS--TT-EEEEE--TTS--EEEEETTTEE-TT
1ivla_dssp ---EEEE-SEEEE-TT-EEEEEEEESS--TT-EEEEEESSSS--EEEEETTTEE-TT
Similar 111111111111111111111111111111111111111111111111111111111
1igml VPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYQNLPLTFGPGTKVDIkrtvaaps
1ivla IPSRFSGSGSGTDFTLSINSVETEDLAVYFCQQVSEWPFTFGGGTKLEI
1igml_dssp --TTEEEEE-SSEEEEEESS--GGG-EEEEEEE-SSSS-EE---EEEEE--ss-tt-
1ivla_dssp S-TTEEEEESSSEEEEEEES--GGG-EEEEEEE-SSSS--B---EEEEE
Similar 1111111111111111111111111111111111111111111111111--------
1ihslh gEADCGLRPLFEKKSLEDKTERELLESYIIVEGSDAEIGMSPWQVMLFRKSPQELLC 1ahtlh EADCGLRPLFEKKSLEDKTERELLESYIIVEGSDAEIGMSPWQVMLFRKSPQELLC 1ihslh_dss --TTTT--TTTGGGT---TTHHHHHHH---BS-EE--TTS-TTEEEEEETTTTEEEE 1ahtlh_dss --STT--TTTGGGT---SSHHHHHHH---BS-EE--TTS-TTEEEEEETTTTEEEE Similar -11111111111111111111111111111111111111111111111111111111 1ihslh GASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIY 1ahtlh GASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIY 1ihslh_dss EEEE-SSSEEEE-GGGTEEGGGTEE--GGGEEEEES--BSSS--TTT-EEEEEEEEE 1ahtlh_dss EEEE-SSSEEEE-GGGTEEGGGTEE--GGGEEEEES--BSSS--TTT-EEE-EEEEE Similar 111111111111111111111111111111111111111111111111111111111 1ihslh IHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWG 1ahtlh IHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWG 1ihslh_dss E-TT-BTTTT-BT--EEEEESS----BTTB---B---HHHHHHH--TT-EEEEEES- 1ahtlh_dss E-TT-BTTTT-BT--EEEEESS-----SS----B---HHHHHHH--TT-EEEEEES- Similar 111111111111111111111111111111111111111111111111111111111 1ihslh NLKEtwtanvgkgQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGD 1ahtlh NLKE tgQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGD 1ihslh_dss -SSTtt-ssttssS-SB-EEEEEEB--HHHHHTT-SS---TTEEEE---GGGS---B 1ahtlh_dss -SS- ----SB-EEEEEEB--HHHHHTT-SS---TTEEEE---TTSS---B Similar 1111-------0011111111111111111111111111111111111111111111 1ihslh ACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQ 1ahtlh ACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQ 1ihslh_dss --TT-TT-EEEEE-TTT--EEEEEEEEE-SSSS-TT--EEEEETGGGHHHHHHHHHH 1ahtlh_dss --TTTTT-EEEEE-TTT--EEEEEEEEE-SSSS-TT--EEEEETGGGHHHHHHHHHH Similar 111111111111111111111111111111111111111111111111111111111 1ihslh F 1ahtlh F 1ihslh_dss H 1ahtlh_dss H Similar 1
1kapp.1 GANLTTRTGDTVYGFNSNTERDFYSATSSSSKLVFSVWDAGGNDTLDFSGFSQNQKI 1sat.1 GANLSTRTGDTVYGFNSNTGRDFLSTTSNSQKVIFAAWDAGGNDTFDFSGYTANQRI 1kapp.1_ds -B-TTTT-S--EEETT--S--GGGB--STT----EEE---SS--EEE-TT--S--EE 1sat.1_dss -B-TTTT-S--EEETT--S--GGGB-SSTTS---EEE---SS--EEE-TT--S--EE Similar 111111111111111111111111111111111111111111111111111111111 1kapp.1 NLNEKALSDVGGLKGNVSIAAGVTVENAIGGSGSDLLIGNDVANVLKGGAGNDILYG 1sat.1 NLNEKSFSDVGGLKGNVSIAAGVTIENAIGGSGNDVIVGNAANNVLKGGAGNDVLFG 1kapp.1_ds E-STT-EEB-TT-BS-EEE-TT----EEE--SS--EEE--SS--EEE--SS--EEE- 1sat.1_dss E-STT-EEB-TT-BS-EEE-TT----EEE--SS--EEE--SS--EEE--SS--EEE- Similar 111111111111111111111111111111111111111111111111111111111 1kapp.1 GLGADQLWGGAGADTFVYGDIAESSAAAPDTLRDFVSGQDKIDLSgldAFVN gGL 1sat.1 GGGADELWGGAGKDIFVFSAASDSAPGASDWIRDFQKGIDKIDLS fFDKEansSS 1kapp.1_ds -SS--EEE--SS--EEE-S-GGGGBTTB-EEETT--TTT-EEE-TtshHHHT s-- 1sat.1_dss -SS--EEE--SS--EEE---GGGG-TTS-EEESS--TTTSEEE-H hHHHHht-TT Similar 111111111111111111111111111111111111111111111--01111--011 1kapp.1 VLQYVDAFAGKAGQAILSYDAASKAGSLAIDFSGDAHADFAINLIGQAT qADIv 1sat.1 FIHFVDHFSGTAGEALLSYNASSNVTDLSVNIGGHAAPDFLVKIVGQVDvaTDF 1kapp.1_ds --EE-SS--S-TTEEEEEEETTTTEEEEEEESSSSSS-SEEEEEES--- gGGEe 1sat.1_dss SSEE-SS--S-TTEEEEEEETTTTEEEEEE-SS--SS-SEEEEEES---ttTSE Similar 1111111111111111111111111111111111111111111111111-0111-
1lgca TETTSFSITKFGPDQPNLIFQGDGYTTKERLTLTKAVRNTVGRALYSSPIHIWDSKT
1lesa TETTSFSITKFSPDQQNLIFQGDGYTTKGKLTLTKAVKSTVGRALYSTPIHIWDRDT
1lgca_dssp -EEEEEEES---SS-TTEEEEET-EEETTEEEEE-S-SS-EEEEEESS-EE-B-TTT
1lesa_dssp -EEEEEEESS--SS-TTEEEEET-EEETTEEEEE-S-SS-EEEEEESS-EE-B-TTT
Similar 111111111111111111111111111111111111111111111111111111111
1lgca GNVANFVTSFTFVIDAPNSYNVADGFTFFIAPVDTKPQTGGGYLGVFNSKDYDKTSQ
1lesa GNVANFVTSFTFVIDAPSSYNVADGFTFFIAPVDTKPQTGGGYLGVFNSKEYDKTSQ
1lgca_dssp --B-EEEEEEEEEEE-SSSSS---EEEEEEEETT------GGGTTT-S-SS--GGG-
1lesa_dssp --B-EEEEEEEEEEE-SBTTB---EEEEEEEETT------GGGTTT-S-SS--GGG-
Similar 111111111111111111111111111111111111111111111111111111111
1lgca TVAVEFDTFYNTAWDPSNGDRHIGIDVNSIKSINTKSWKLQNGKEANVVIAFNGATN
1lesa TVAVEFDTFYNAAWDPSNKERHIGIDVNSIKSVNTKSWNLQNGERANVVIAFNAATN
1lgca_dssp -EEEEEE-S--TTTS-TT---EEEEEESSSS-SSEEE----TT-EEEEEEEE-TTT-
1lesa_dssp -EEEEEE-S--TTTS-TT---EEEEEESSSS-SEEEE----TT-EEEEEEEEETTTT
Similar 111111111111111111111111111111111111111111111111111111111
1lgca VLTVSLTYP
1lesa VLTVTLTYP
1lgca_dssp EEEEEEEE-
1lesa_dssp EEEEEEEE-
Similar 111111111
1lht GLSDDEWNHVLGIWAKVEPDLSAHGQEVIIRLFQLHPETQERFAKFKNLTTIDALKS
1bvc VLSEGEWQLVLHVWAKVEADVAGHGQDILIRLFKSHPETLEKFDRFKHLKTEAEMKA
1lht_dssp ---HHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHH-GGGGGG-GGGTT--SHHHHHH
1bvc_dssp ---HHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHSGGGGGG-TTTTT--SHHHHHH
Similar 111111111111111111111111111111111111111111111111111111111
1lht SEEVKKHGTTVLTALGRILKQKNNHEQELKPLAESHATKHKIPVKYLEFICEIIVKV
1bvc SEDLKKHGVTVLTALGAILKKKGHHEAELKPLAQSHATKHKIPIKYLEFISEAIIHV
1lht_dssp -HHHHHHHHHHHHHHHHHHHTTT--HHHHHHHHHHHHHTT---HHHHHHHHHHHHHH
1bvc_dssp -HHHHHHHHHHHHHHHHHHHTTT--HHHHHHHHHHHHHTT---HHHHHHHHHHHHHH
Similar 111111111111111111111111111111111111111111111111111111111
1lht IAEKHPSDFGADSQAAMKKALELFRNDMASKYKEFGFQ
1bvc LHSRHPGDFGADAQGAMNKALELFRKDIAAKYKELGYQ
1lht_dssp HHHH-TTT--HHHHHHHHHHHHHHHHHHHHHHHTTT--
1bvc_dssp HHHH-TTT--HHHHHHHHHHHHHHHHHHHHHHHHHT--
Similar 11111111111111111111111111111111111111
1lkka lepePWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVV
1shaa aeEWYFGKITRRESERLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNV
1lkka_dssp ----TTB-TT--HHHHHHHHTSTT--TT-EEEEE-SSSTT-EEEEEEEEETTTEEEE
1shaa_dssp --TTEEES--HHHHHHHHT-TTS-TT-EEEEE-SSSTT-EEEEEEEEETTTEEEE
Similar --0011111111111111111111111111111111111111111111111111111
1lkka KHYKIRNLDNGGFYISPRITFPGLHELVRHYTNASDGLCTRLSRPCQ
1shaa KHYKIRKLDSGGFYITSRTQFSSLQQLVAYYSKHADGLCHRLTNVCP
1lkka_dssp EEEEEEE-TTS-EESSTTS-BSSHHHHHHHHHH--TTSSS---SB--
1shaa_dssp EEEEEEE-TTS-EESSTT-EESSHHHHHHHHTT--TTSSS---SB--
Similar 11111111111111111111111111111111111111111111111
1loea TETTSFSITKFGPDQQNLIFQGDGYT TKERLTLTK aVRNTVGRALYSSPI
1lte VETISFSFSEFEPGNDNLTLQGASLItQSGVLQLTKinqngmpAWDSTGRTLYAKPV
1loea_dssp -EEEEEEESS--SS-TTEEEEET-EE ETTEEEEE- s-SS-EEEEEESS-E
1lte_dssp -EEEEEEESS--TT-TTEEEEET-EE-TTS-EESS-b-tts-b-SS-EEEEEESS-E
Similar 11111111111111111111111111-111111111------111111111111111
1loea HIWDSKTGNVANFVTSFTFVIDAPNsy nVADGFTFFIAPVDTKPQTGGGYLGVFNS
1lte HIWDMTTGTVASFETRFSFSIEQPYtrplPADGLVFFMGPTKSKPAQGYGYLGIFNQ
1loea_dssp E-B-TTT--B-EEEEEEEEEEE-SSss s---EEEEEEEETT------GGGTTT-S-
1lte_dssp E-B-TTT--B-EEEEEEEEE-----sss---EEEEEEEESTT----B-GGGTTTBSS
Similar 111111111111111111111111100-01111111111111111111111111111
1loea KDYDKTSQTVAVEFDTFYnTAWDPsNGDRHIGIDVNSIKSINTKSWALQNGKEANVV
1lte SKQDNSYQTLGVEFDTFS NPWDP PQVPHIGIDVNSIRSIKTQPFQLDNGQVANVV
1loea_dssp SS--GGG--EEEEEE-S--TTTS-tT---EEEEEESSSS-SEEEE----TT-EEEEE
1lte_dssp S---GGG--EEEEEE-S- -TTS- S-SSEEEEEESSSS-SEEEE----TT--EEEE
Similar 111111111111111111-11111-11111111111111111111111111111111
1loea IAFNAATNVLTVSLTY
1lte IKYDASSKLLHAVLVYpssgaiytiaeivdvkqvlpewvdvglsgatgaqrdaaeth
1loea_dssp EEEETTTTEEEEEEE-
1lte_dssp EEEETTTTEEEEEEEEtttteeeeeeee--hhhhs-seeeeeeeeee-sstt-----
Similar 1111111111111111-----------------------------------------
1loea
1lte dvyswsfqaslp
1loea_dssp
1lte_dssp eeeeeeeeeee-
Similar ------------
1loea TETTSFSITKFGPDQQNLIFQGDGYTTKERLTLTKAVRNTVGRALYSSPIHIWDSKT
2ltna TETTSFLITKFSPDQQNLIFQGDGYTTKEKLTLTKAVKNTVGRALYSSPIHIWDRET
1loea_dssp -EEEEEEESS--SS-TTEEEEET-EEETTEEEEE-S-SS-EEEEEESS-EE-B-TTT
2ltna_dssp -EEEEEEESS--SS-TTEEEEET-EE-SSSEEEE-S-SS-EEEEEESS-EE-B-TTT
Similar 111111111111111111111111111111111111111111111111111111111
1loea GNVANFVTSFTFVIDAPNSYNVADGFTFFIAPVDTKPQTGGGYLGVFNSKDYDKTSQ
2ltna GNVANFVTSFTFVINAPNSYNVADGFTFFIAPVDTKPQTGGGYLGVFNSAEYDKTTQ
1loea_dssp --B-EEEEEEEEEEE-SSSSS---EEEEEEEETT------GGGTTT-S-SS--GGG-
2ltna_dssp --B-EEEEEEEEEEE-SSTTS---EEEEEEEETT------GGGTTT-S-SS--TTS-
Similar 111111111111111111111111111111111111111111111111111111111
1loea TVAVEFDTFYNTAWDPSNGDRHIGIDVNSIKSINTKSWALQNGKEANVVIAFNAATN
2ltna TVAVEFDTFYNAAWDPSNRDRHIGIDVNSIKSVNTKSWKLQNGEEANVVIAFNAATN
1loea_dssp -EEEEEE-S--TTTS-TT---EEEEEESSSS-SEEEE----TT-EEEEEEEEETTTT
2ltna_dssp -EEEEEE-S--TTTS-TT---EEEEEESSSS-SEEEE----TT--EEEEEEEETTTT
Similar 111111111111111111111111111111111111111111111111111111111
1loea VLTVSLTY
2ltna VLTVSLTYp
1loea_dssp EEEEEEE-
2ltna_dssp EEEEEEEE-
Similar 11111111-
1ltsd APQTITELCSEYRNTQIYTINDKILSYTESMAGKREMVIITFKSGETFQVEVPgsqH
1chpd TPQNITDLCAEYHNTQIHTLNDKIFSYTESLADKREMAIITFKNGATFQVEVPgsqH
1ltsd_dssp --SSHHHHHHTSTTEEEEEEEE--SEEEEE-STT--EEEEE-TTS-EEEE----ttS
1chpd_dssp ---SHHHHHTTSTTEEEEEEEE---EEEEE-STT--EEEEE-TTS-EEE-----ttS
Similar 111111111111111111111111111111111111111111111111111110001
1ltsd IDSQKKAIERMKDTLRITYLTETKIDKLCVWNNKTPNSIAAISMK
1chpd IDSQKKAIERMKDTLRIAYLTEAKVEKLCVWNNKTPHAIAAISMA
1ltsd_dssp -TTHHHHHHHHHHHHHHHHHTT--EEEEEEE-SSSSEEEEEEEEE
1chpd_dssp -HHHHHHHHHHHHHHHHHHHHT--EEEEEEETTSSSEEEEEEEEE
Similar 111111111111111111111111111111111111111111111
1mcti RICPRIWMECTRDSDCMAKCICV AGHC
1ppei RVCPRILMECKKDSDCLAECVCLeHGYC
1mcti_dssp --EE----B-SSGGGSSTT--EE TTEE
1ppei_dssp --EE----B-SSGGGSSTT--B-tTSBB
Similar 11111111111111111111111-1111
1meea AQSVPYGISQIKAPALHSQGYTGSNVKVAVIDSGIDSSHPDLNVRGGASFVPSETNP
1sup AQSVPYGVSQIKAPALHSQGYTGSNVKVAVIDSGIDSSHPDLKVAGGASMVPSETNP
1meea_dssp -----HHHHHTTHHHHHHHT-S-TT-EEEEEES---TT-TT--EEEEEE-BTTB--T
1sup_dssp -----HHHHHTTHHHHHHHT-S-TT-EEEEEES---TT-TT--EEEEEE--SS---T
Similar 111111111111111111111111111111111111111111111111111111111
1meea YQDGSSHGTHVAGTIAALNNSIGVLGVAPSASLYAVKVLDSTGSGQYSWIINGIEWA
1sup FQDNNSHGTHVAGTVAALNNSIGVLGVAPSASLYAVKVLGADGSGQYSWIINGIEWA
1meea_dssp T--TTSSHHHHHHHHH--SSSSS---SSTTSEEEEEE-S-TTSB--HHHHHHHHHHH
1sup_dssp T--SSSHHHHHHHHHH--SSSSS---SSTT-EEEEEE-B-TTS-B-HHHHHHHHHHH
Similar 111111111111111111111111111111111111111111111111111111111
1meea ISNNMDVINMSLGGPTGSTALKTVVDKAVSSGIVVAAAAGNEGSSGSTSTVGYPAKY
1sup IANNMDVINMSLGGPSGSAALKAAVDKAVASGVVVVAAAGNEGTSGSSSTVGYPGKY
1meea_dssp HHTT-SEEEE-EEBSS--HHHHHHHHHHHHTT-EEEEE--S---BTTB----BTTTS
1sup_dssp HHTT-SEEEE---BS---HHHHHHHHHHHHTT-EEEEE--S---BTTB----BTTTS
Similar 111111111111111111111111111111111111111111111111111111111
1meea PSTIAVGAVNSANQRASFSSAGSELDVMAPGVSIQSTLPGGTYGAYNGTSMATPHVA
1sup PSVIAVGAVDSSNQRASFSSVGPELDVMAPGVSIQSTLPGNKYGAYNGTSMASPHVA
1meea_dssp TTSEEEEEE-TTS-B-TT---STT--EEEE-SSEEEEETTTEEEEE-SHHHHHHHHH
1sup_dssp TTSEEEEEE-TTS-B-TT---STT--EEEE-SSEEEEETTTEEEEE-SHHHHHHHHH
Similar 111111111111111111111111111111111111111111111111111111111
1meea GAAALILSKHPTWTNAQVRDRLESTATYLGSSFYYGKGLINVQAAA
1sup GAAALILSKHPNWTNTQVRSSLENTTTKLGDSFYYGKGLINVQAAA
1meea_dssp HHHHHHHHH-TT--HHHHHHHHHHS-B--S-HHHHTT-B--HHHHT
1sup_dssp HHHHHHHHH-TT--HHHHHHHHHHT-B--S-HHHHTT-B--HHHHT
Similar 1111111111111111111111111111111111111111111111
1mrj DVSFRLSGATSSSYGVFISNLRKALPNERKLYDIPLLRSSLPGSQRYALIHLTNYAD
1mrg DVSFRLSGADPRSYGMFIKDLRNALPFREKVYNIPLLLPSVSGAGRYLLMHLFNRDG
1mrj_dssp -EEEE-TT--HHHHHHHHHHHHHTS-EEEEETTEEEE-S---HHHHEEEEEEE-TT-
1mrg_dssp -EEEESSS--HHHHHHHHHHHHHHS-EEEEETTEEEE-S---GGGGEEEEEEE-TT-
Similar 111111111111111111111111111111111111111111111111111111111
1mrj ETISVAIDVTNVYIMGYRAGDTSYFFNEASATEAAKYVFKDAMRKVTLPYSGNYERL
1mrg KTITVAVDVTNIYIMGYLADTTSYFFNEPAAELASQYVFRDARRKITLPYSGDYERL
1mrj_dssp -EEEEEEETTTTEEEEEEETTEEEE-SSHHHHHHTTTSSTT-SEEEE-SS-SSHHHH
1mrg_dssp -EEEEEEETTTTEEEEEEETTEEEE-SSHHHHHHTTTS-TT-SEEEE-SS-SSHHHH
Similar 111111111111111111111111111111111111111111111111111111111
1mrj QTAAGKIRENIPLGLPALDSAITTLFYYNANSAASALMVLIQSTSEAARYKFIEQQI
1mrg QIAAGKPREKIPIGLPALDSAISTLLHYDSTAAAGALLVLIQTTAEAARFKYIEQQI
1mrj_dssp HHHHTS-GGGS-BSHHHHHHHHHHHHTT-HHHHHHHHHHHHHHTHHHHHBHHHHHHH
1mrg_dssp HHHHSS-GGGS-BSHHHHHHHHHHHTS--HHHHHHHHHHHHHHHHHHHHBHHHHHHH
Similar 111111111111111111111111111111111111111111111111111111111
1mrj GKRVDKTFLPSLAIISLENSWSALSKQIQIASTNNGQFESPVVLINAQNQRVTITNV
1mrg QERAYRDEVPSLATISLENSWSGLSKQIQLAQGNNGIFRTPIVLVDNKGNRVQITNV
1mrj_dssp HT-SS--B---HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEEE-TTS-EEEEEET
1mrg_dssp HTTSSS-B---HHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEE-TTSSS-EEEEET
Similar 111111111111111111111111111111111111111111111111111111111
1mrj DAGVVTSNIALLLNRNNm
1mrg TSKVVTSNIQLLLNTRN
1mrj_dssp TSHHHHHTB--B--TTT-
1mrg_dssp TSHHHHHTB--B--GGG
Similar 11111111111111111-
1napa aeLRCLCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKK
1plfa LQCVCLKTTSGINPRHISSLEVIGAGLHCPSPQLIATLKTGRKICLDQQNPLYKK
1napa_dssp -----S-SS-BS---GGGEEEEEEE--BTTBSS-EEEEEETTS-EEEE-TT-HHHHH
1plfa_dssp ---S-SS-B----GGGEEEEEEE---SS-SS-EEEEEETTS-EEEB-SSSTHHHH
Similar --1111111111111111111111111111111111111111111111111111111
1napa IVQKKLAg
1plfa IIKRLLK
1napa_dssp HHHHHHTt
1plfa_dssp HHHHHH-
Similar 1111111-
1opr MKPYQRQFIEFALNKQVLKFGEFTLKSGRKSPYFFNAGLFNTGRDLALLGRFYAEAL
1oroa MKPYQRQFIEFALSKQVLKFGEFTLKSGRKSPYFFNAGLFNTGRDLALLGRFYAEAL
1opr_dssp --HHHHHHHHHHHHTT-EEEEEEE-TTS-EEEEEE-GGG--SHHHHHHHHHHHHHHH
1oroa_dssp --HHHHHHHHHHHHTTSEEEEEEE-TTS-EEEEEE-GGG--BHHHHHHHHHHHHHHH
Similar 111111111111111111111111111111111111111111111111111111111
1opr VDSGIEFDLLFGPAYKGIPIATTTAVALAEHHDKDLPYCFNRKeakdhgeggSLVGS
1oroa VDSGIEFDLLFGPAYKGIPIATTTAVALAEHHDLDLPYCFNRKeakdhgeggNLVGS
1opr_dssp HHHT---SEEEE-TTTHHHHHHHHHHHHHHHS-----EEEE-----sss----EEES
1oroa_dssp HHHT---SEEEE-TTTHHHHHHHHHHHHHHHH----BEEEE-Ss--ssss-tTEEES
Similar 111111111111111111111111111111111111111111100000000011111
1opr ALQGRVMLVDDVITAGTAIRESMEIIQAHGATLAGVLISLDRQERGRGEISAIQEVE
1oroa ALQGRVMLVDDVITAGTAIRESMEIIQANGATLAGVLISLDRQERGRGEISAIQEVE
1opr_dssp -S-SEEEEE-SB-SSS-HHHHHHHHHHHHT-EEEEEEEEEE--B--SSSS-HHHHHH
1oroa_dssp ---SEEEEE-S----GGGGHHHHHHHHHTT-EEEEEEEEEE--B--SSSS-HHHHHH
Similar 111111111111111111111111111111111111111111111111111111111
1opr RDYGCKVISIITLKDLIAYLEEKPDMAEHLAAVRAYREEFG
1oroa RDYNCKVISIITLKDLIAYLEEKPEMAEHLAAVKAYREEFG
1opr_dssp HHHT-EEEEEEEHHHHHHHHTT-GGGHHHHHHHHHHHHHHB
1oroa_dssp HHHT-EEEEEEEHHHHHHHHTT-GGGHHHHHHHHHHHHHHB
Similar 11111111111111111111111111111111111111111
1osa aeqlTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDA
1cll lTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDA
1osa_dssp --s--HHHHHHHHHHHHHH-TT-SS-B-HHHHHHHHHHTT----HHHHHHHHHHH-T
1cll_dssp -HHHHHHHHHHHHHHH-TT-SSEE-HHHHHHHHHTTT----HHHHHHHHHHH-T
Similar ---011111111111111111111111111111111111111111111111111111
1osa DGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGE
1cll DGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE
1osa_dssp T-SSSB-HHHHHHHHHHHHHHHHHHHHHHHHHHHH-TT-SS-B-HHHHHHHHHHTT-
1cll_dssp T-SSSEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TT-SSSB-HHHHHHHHHHTT-
Similar 111111111111111111111111111111111111111111111111111111111
1osa KLTDDEVDEMIREADIDGDGHINYEEFVRMMVs
1cll KLTDEEVDEMIREADIDGDGQVNYEEFVQMMT
1osa_dssp ---HHHHHHHHHHH-SSSSSSB-HHHHHHHHT-
1cll_dssp ---HHHHHHHHHHH-SS-SSSB-HHHHHHHHH
Similar 11111111111111111111111111111111-
1pbe.1 LKVFERVYPFGWLGLLADTPPVSHELIYANHPRGFALCSQRSATRSRYYVQVPLTEK 1doc.1 LKVFERVYPFGWLGLLADTPPVSHELIYANHPRGFALCSQRSATRSRYYVQVPLSEK 1pbe.1_dss -EEEEEEEEEEEEEEEESS--S-SS-EEEE-TT--EEEEEEETTEEEEEEEE-TT-- 1doc.1_dss -EEEEEEEEEEEEEEEESS--SSSS-EEE--TT--EEEEEEETTEEEEEEEE-TT-- Similar 111111111111111111111111111111111111111111111111111111111 1pbe.1 VEDWSDERFWTELKARLPAEVAEKLVTGPSLEKSIAPLRSFVVE 1doc.1 VEDWSDERFWTELKARLPSEVAEKLVTGPSLEKSIAPLRSFVVE 1pbe.1_dss GGG--HHHHHHHHHHHS-HHHHHH-----EEEEEEEEEEEEEEE 1doc.1_dss GGG--HHHHHHHHHHHS-HHHHTT-----EEEEEEEEEEEEEEE Similar 11111111111111111111111111111111111111111111
1pfka mIKKIGVLTSGGDAPGMNAAIRGVVRSALTEGLEVMGIYDGYLGLYEDRMVQLDRYS
3pfk MKRIGVLTSGGDSPGMNAAIRSVVRKAIYHGVEVYGVYHGYAGLIAGNIKKLEVGD
1pfka_dssp ---EEEEEE-SS--TTHHHHHHHHHHHHHHTT-EEEEESTHHHHHHTT-EEEE-SGG
3pfk_dssp --EEEEEEESS--TTHHHHHHHHHHHHHHTT-EEEEESSHHHHHHTT-EEEE-GGG
Similar -11111111111111111111111111111111111111111111111111111111
1pfka VSDMINRGGTFLGSARFPEFRDENIRAVAIENLKKRGIDALVVIGGDGSYMGAMRLT
3pfk VGDIIHRGGTILYTARCPEFKTEEGQKKGIEQLKKHGIQGLVVIGGDGSYQGAKKLT
1pfka_dssp GTT-TT--S-TT-----GGGGSHHHHHHHHHHHHHTT--EEEEEE-HHHHHHHHHHH
3pfk_dssp GTT-TT--S-TT-----GGGSSHHHHHHHHHHHHHHT--EEEEEE-HHHHHHHHHHH
Similar 111111111111111111111111111111111111111111111111111111111
1pfka EMGFPCIGLPGTIDNDIKGTDYTIGFFTALSTVVEAIDRLRDTSSSHQRISVVEVMG
3pfk EHGFPCVGVPGTIDNDIPGTDFTIGFDTALNTVIDAIDKIRDTATSHERTYVIEVMG
1pfka_dssp HTT--EEEEEB-TT---TT-S--BTHHHHHHHHHHHHHHHHHHHHHHT-EEEEEE--
3pfk_dssp HTT--EEEEEB-SS---TT-SS-BTHHHHHHHHHHHHHHHHHHHHHTT-EEEEEE--
Similar 111111111111111111111111111111111111111111111111111111111
1pfka RYCGDLTLAAAIAGGCEFVVVPEVEFSREDLVNEIKAGIAKGKKHAIVAITEHMCDV
3pfk RHAGDIALWSGLAGGAETILIPEADYDMNDVIARLKRGHERGKKHSIIIVAEGVGSG
1pfka_dssp TT--HHHHHHHHHTT-SEEE-TTS---HHHHHHHHHHHHHTT-S-EEEEEESSSS-H
3pfk_dssp SS--HHHHHHHHHHT-SEEE-TTS---HHHHHHHHHHHHHTT---EEEEEETTT--H
Similar 111111111111111111111111111111111111111111111111111111111
1pfka DELAHFIEKETGRETRATVLGHIQRGGSPVPYDRILASRMGAYAIDLLLAGYGGRCV
3pfk VDFGRQIQEATGFETRVTVLGHVQRGGSPTAFDRVLASRLGARAVELLLEGKGGRCV
1pfka_dssp HHHHHHHHHHHSS-EEEEE-GGGGG-S---HHHHHHHHHHHHHHHHHHHHT--SEEE
3pfk_dssp HHHHHHHHHHH---EEEEE-GGGGG-S---HHHHHHHHHHHHHHHHHHHTT--SEEE
Similar 111111111111111111111111111111111111111111111111111111111
1pfka GIQNEQLVHHDIIDAIeNMKRPFKGDWLDCAKKL
3pfk GIQNNQLVDHDIAEAL ANKHTIDQRMYALSKELs
1pfka_dssp EEETTEEEEEEHHHHHhH------HHHHHHHHHH
3pfk_dssp EEETTEEEEEEHHHHH TS-----HHHHHHHHHT-
Similar 1111111111111111-11111111111111111-
1pk4 DCYHGDGQSYRGTSSTTTTGKKCQSWSSMTPHRHQKTPENYPNAGLTMNYCRNPDAD
1ceaa ECKTGNGKNYRGTMSKTKNGITCQKWSSTSPHRPRFSPATHPSEGLEENYCRNPDND
1pk4_dssp -EE-TTSTT------BBTTS-BB--TT--SSS--S--TTT-TTS---TT--B-TT--
1ceaa_dssp --B-TT-TT------B-TTS-BB--TT--SSS--SS-TTT-GGG---TT--B-TT--
Similar 111111111111111111111111111111111111111111111111111111111
1pk4 KGPWCFTTDPSVRWEYCNLKK
1ceaa pQGPWCYTTDPEKRYDYCDILE
1pk4_dssp SS-EEEBSSTT--EEEBS-EE
1ceaa_dssp tT--EEEBS-TT--EEE----B
Similar -111111111111111111111
1ppi.1 EPFANWWDNGSNQVAFGRGNRGFIVFNNDDWQLSSTLQTGLPGGTYCDVISGDKVGN 1hny.1 QPFTNWYDNGSNQVAFGRGNRGFIVFNNDDWSFSLTLQTGLPAGTYCDVISGDKING 1ppi.1_dss --EEEEEE-SSSEEEEEETTTEEEEEE-SSS-EEEEEE--S-SEEEE-TTT--EETT 1hny.1_dss --EEEEEE-SSSEEEEEETTTEEEEEE-SSS-EEEEEE----SEEEE-TTT--EETT Similar 111111111111111111111111111111111111111111111111111111111 1ppi.1 SCTGIKVYVSSDGTAQFSISNSAEDPFIAIHAESK 1hny.1 NCTGIKIYVSDDGKAHFSISNSAEDPFIAIHAESK 1ppi.1_dss EESS-EEEE-TTSEEEEEE-TTSSS-EEEEEGGGB 1hny.1_dss EESS-EEEE-TTSEEEEEE-TT-SS-EEEEETTSB Similar 11111111111111111111111111111111111
1prcl.1 ALLSFERKYRVRGGTLIGGDLFDFWVGPYFVGFFGVSAIFFIFLGVSLIGYAASQGP 1pcrl.1 ALLSFERKYRVPGGTLVGGNLFDFWVGPFYVGFFGVATFFFAALGIILIAWSAVLQG 1prcl.1_ds -B-TTTGGG-BS---SSSGGGT--EETTEE--HHHHHHHHHHHHHHHHHHHHHTTSS 1pcrl.1_ds -B-TT-TTT--S---SSSTTSS-EEETTEEE-HHHHHHHHHHHHHHHHHHHHHHHHT Similar 111111111111111111111111111111111111111111111111111111111 1prcl.1 TWDPFAISINPPDLKYGLGAAPLLEGGFWQAITVCALGAFISWMLREVEISRKLGIG 1pcrl.1 TWNPQLISVYPPALEYGLGGAPLAKGGLWQIITICATGAFVSWALREVEICRKLGIG 1prcl.1_ds ---TTT-EE----GGGTTS---GGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-- 1pcrl.1_ds ---TTT--B----TTTTTS---TTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-- Similar 111111111111111111111111111111111111111111111111111111111 1prcl.1 WHVPLAFCVPIFMFCVLQVFRPLLLGSWGHAFPYGILSHLDWVNNFGYQYLNWHYNP 1pcrl.1 YHIPFAFAFAILAYLTLVLFRPVMMGAWGYAFPYGIWTHLDWVSNTGYTYGNFHYNP 1prcl.1_ds SHHHHHHHHHHHHHHHHHTHHHHHHT-GGGS--EETTHHHHHHHHHHHTTS-GGG-H 1pcrl.1_ds SHHHHHHHHHHHHHHHHHTHHHHHHT-GGGS--BSTTHHHHHHHHHHHTTSSGGG-H Similar 111111111111111111111111111111111111111111111111111111111 1prcl.1 GHMSSVSFLFVNAMALGLHGGLILSVANPGDGDKVKTAEHENQYFRDVVGYSIGALS 1pcrl.1 AHMIAISFFFTNALALALHGALVLSAANPEKGKEMRTPDHEDTFFRDLVGYSIGTLG 1prcl.1_ds HHHHHHHHHHHHHHHHHHHHHHHHHHH--STT-----HHHHHHHHHHHHS----HHH 1pcrl.1_ds HHHHHHHHHHHHHHHHHHHHHHHHHHHS-SSSS----HHHHHHHHHHHHSB--HHHH Similar 111111111111111111111111111111111111111111111111111111111 1prcl.1 IHRLGLFLASNIFLTGAFGTIASGPFWTRGWPEWWGWWLDIPFw saDY 1pcrl.1 IHRLGLLLSLSAVFFSALCMIITGTIWFDQWVDWWQWWVKLPWwanipggingaeYQ 1prcl.1_ds HHHHHHHHHHHHHHHHHHHHHTBTTTB-S-HHHHTHHHHT-STt ---G 1pcrl.1_ds HHHHHHHHHHHHHHHHHHHHHHBTTTB-S-HHHHTHHHHT-HHhht---stt----- Similar 11111111111111111111111111111111111111111110---------0011 1prcl.1 qTIYTQIQARGPHI TVSGEWGDNDRVGKPFYSYWLGKIGDAQIGPIYLGASGIAAF 1pcrl.1 NIFSQVQVRGPADlGMTEDVNLANRSGVGPFSTLLGWFGNAQLGPIYLGSLGVLSL 1prcl.1_ds gGTS-SS-EE---- ----SS-GGGEES--EE-TTGGGTS--EE--EE-HHHHHHHH 1pcrl.1_ds -SS-SSEEE-S------SS--TTTB-----B-HHHHTTS--BB---B--HHHHHHH Similar -1111111111111-111111111111111111111111111111111111111111 1prcl.1 AFGSTAILIILFNMAAEVHFDPLQFFRQFFWLGLYPPkaQYGMG IPPLHDGGWWLM 1pcrl.1 FSGLMWFFTIGIWFWYQAGWNPAVFLRDLFFFSLEPPapEYGLSfAAPLKEGGLWLI 1prcl.1_ds HHHHHHHHHHHHHHHHHTTT-HHHHHHHGGG--B---ss--TTS ---TTTTHHHHH 1pcrl.1_ds HHHHHHHHHHHHHHHHHTTT-HHHHHHSTTT--B----tTTTT-s-S-TTTTHHHHH Similar 11111111111111111111111111111111111110011111-111111111111 1prcl.1 AGLFMTLSLGSWWIRVYSRARALGLGTHIAWNFAAAIFFVLCIGCIHPTLVGSWSEG 1pcrl.1 ASFFMFVAVWSWWGRTYLRAQALGMGKHTAWAFLSAIWLWMVLGFIRPILMGSWSEA 1prcl.1_ds HHHHHHHHHHHHHHHHHHHHHHTT--SHHHHHHHHHHHHHHHHHTHHHHHHT-GGGS 1pcrl.1_ds HHHHHHHHHHHHHHHHHHHHHTTT--SHHHHHHHHHHHHHHHHHTHHHHHHT-GGGS Similar 111111111111111111111111111111111111111111111111111111111 1prcl.1 VPFGIWPHIDWLTAFSIRYGNFYYCPWHGFSIGFAYGCGLLFAAHGATILAVARFGG 1pcrl.1 VPYGIFSHLDWTNNFSLVHGNLFYNPFHGLSIAFLYGSALLFAMHGATILAVSRFGG 1prcl.1_ds --BSTTHHHHHHHHHHHHTT-GGG-HHHHHHHHHHHHHHHHHHHHHHHHHHTGGGTT 1pcrl.1_ds --B-HHHHHHHHHHHHHHTT-GGG-HHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTT Similar 111111111111111111111111111111111111111111111111111111111 1prcl.1 DREIEQITDRGTAVERAALFWRWTIGFNATIESVHRWGWFFSLMVMVSASVGILLTG 1pcrl.1 ERELEQIADRGTAAERAALFWRWTMGFNATMEGIHRWAIWMAVLVTLTGGIGILLSG 1prcl.1_ds T-HHHHHHS--HHHHHHHHHHHHHHS----HHHHHHHHHHHHHHHHHHHHHHHHHBT 1pcrl.1_ds T-HHHHHHS--HHHHHHHHHHHHHHS----HHHHHHHHHHHHHHHHHHHHHHHHSBT Similar 111111111111111111111111111111111111111111111111111111111 1prcl.1 TFVDNWYLWCVKhgaapdypaylpatpdpaslpgapkmyhgalaqhLDIAQLVWYAQ 1pcrl.1 TVVDNWYVWGQN hGDLASLAIYSF 1prcl.1_ds TTBS-HHHHHHHtt-------ss--b--gggstt----btteeettEEHHHHHHHHH 1pcrl.1_ds TTBS-HHHHHHS ---HHHHHHHHH Similar 111111111111---------------------------------011111111111 1prcl.1 WLVIWTVvLLYLRRE 1pcrl.1 WIFLAGL IYYLQTE 1prcl.1_ds HHHHHHHhHHTHHHH 1pcrl.1_ds HHHHHHH HHHHHHH Similar 1111111-1111111
1puc sksgvprlltasererlepfidQIHYSPRYADDEYEYRHVMLPKAMLKaiptdYFnp
1cksa ahkQIYYSDKYFDEHYEYRHVMLPRELSK qVPk
1puc_dssp ----------hhhhhtthhhhtT-EE---EE-SS-EE--EE--HHHHTts-ggGB-t
1cksa_dssp -----EE---EE-SS-EE--EE--HHHHH tS-s
Similar -------------------00011111111111111111111111111----0110-
1puc etgtlRILQEEEWRGLGITQSLGWEMY EvhVPEPHilLFKrEK
1cksa tHLMSEEEWRRLGVQQSLGWVHYmIhePEPHIllFRRpLP
1puc_dssp ttssb----HHHHHHTT----SS---- ------TT--------
1cksa_dssp sS---HHHHHHHT----TT----b----------------
Similar ----01111111111111111111111-1001111100111011
1pvb SFAGLKDADVAAALAACSAADSFKHKEFFAKVGLASKSLDDVKKAFYVIDQDKSGF
1cdp aFAGVLNDADIAAALEACKAADSFNHKAFFAKVGLTSKSADDVKKAFAIIDQDKSGF
1pvb_dssp --TTS-HHHHHHHHHHT-STT---HHHHHHHHTGGGS-HHHHHHHHHHH-TT-SSS
1cdp_dssp --TTSS-HHHHHHHHHHT-STT---HHHHHHHHTGGGS-HHHHHHHHHHHSTT-SSE
Similar -11111111111111111111111111111111111111111111111111111111
1pvb IEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEFAAMIK
1cdp IEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKIGVDEFTALVK
1pvb_dssp B-HHHHHTGGGGT-TTS----HHHHHHHHHHH-TTSSSSB-HHHHHHHH-
1cdp_dssp E-HHHHHTGGGGTSTT-----HHHHHHHHHHH-TT-SSSEEHHHHHHHHH
Similar 11111111111111111111111111111111111111111111111111
1pyda.1 SEITLGKYLFERLKQVNVNTVFGLPGDFNLSLLDKIYEVEGMRWAGNANELNAAYAA 1pvda.1 SEITLGKYLFERLKQVNVNTVFGLPGDFNLSLLDKIYEVEGMRWAGNANELNAAYAA 1pyda.1_ds -EEEHHHHHHHHHHHTT--EEEE---TTTHHHHHGGGGSTT-EE---S-HHHHHHHH 1pvda.1_ds -EEEHHHHHHHHHHHTT--EEEE---TTTHHHHHGGGGSTT-EE---S-HHHHHHHH Similar 111111111111111111111111111111111111111111111111111111111 1pyda.1 DGYARIKGMSCIITTFGVGELSALNGIAGSYAEHVGVLHVVGVPSISHHTLGNGDFT 1pvda.1 DGYARIKGMSCIITTFGVGELSALNGIAGSYAEHVGVLHVVGVPSISHHTLGNGDFT 1pyda.1_ds HHHHHHHS-EEEEEETTHHHHHHHHHHHHHHHHT--EEEEEEE-S----S-SSS-SS 1pvda.1_ds HHHHHHHS-EEEEEETTHHHHHHHHHHHHHHHHT--EEEEEEE------S-SSS-SS Similar 111111111111111111111111111111111111111111111111111111111 1pyda.1 VFHRMSANISETTAMITDIATAPAEIDRCIRTTYVTQRPVYLGLPANLVDLNVPAKL 1pvda.1 VFHRMSANISETTAMITDIATAPAEIDRCIRTTYVTQRPVYLGLPANLVDLNVPAKL 1pyda.1_ds HHHHHHGGG-SEEEE---TTTHHHHHHHHHHHHHHHTS-EEEEEETGGGGSEEEGGG 1pvda.1_ds HHHHHHGGG-SEEEE---TTTHHHHHHHHHHHHHHHTS-EEEEEETTTTTSEEEGGG Similar 111111111111111111111111111111111111111111111111111111111
1rbla.1 saagykagvkdYKLTYYTPDYTPKDTDLLAAFRFSPQPGVPADEAGAAIAAESSTGT 1ausl.1 YKLTYYTPEYETLDTDILAAFRVSPQPGVPPEEAGAAVAAESSTGT 1rbla.1_ds -------b---THHHHB-TT----TTSEEEEEEEEE-TT--HHHHHHHHHHHTTT-- 1ausl.1_ds -HHHHB-TT----TT-EEEEEEEEE-TT--HHHHHHHHHHHTSS-- Similar -----------1111111111111111111111111111111111111111111111 1rbla.1 WTTVWTDLLTDMDRYKGKCYHIEPVAGEENSYFAFIAYPLDLFEEGSVTNILTSIVG 1ausl.1 WTTVWTDGLTNLDRYKGRCYHIEPVAGEENQYICYVAYPLDLFEEGSVTNMFTSIVG 1rbla.1_ds SSB-GGGGGS-HHHH--EEEEEEE-TT-TT-EEEEEEE-GGGS-TT-HHHHHHHHHS 1ausl.1_ds SS--GGGGGS-GGGT--EEEEEEE-TT-SS-EEEEEEE-GGGS-TT-HHHHHHHHHS Similar 111111111111111111111111111111111111111111111111111111111 1rbla.1 NVFGFKAIRSLRLEDIRFPVALVK 1ausl.1 NVFGFKALRALRLEDLRIPVAYVK 1rbla.1_ds SGGG-TTEEEEEEEEEE--HHHHT 1ausl.1_ds SGGG-TTEEEEEEEEEE--HHHHT Similar 111111111111111111111111
1rdd mlkQVEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMELMAAIVALE
1ril rkRVALFTDGACLGNPGPGGWAALLRFHAHEKLLSGGEACTTNNRMELKAAIEGLK
1rdd_dssp -bsS-EEEEEEEESSTTEEEEEEEEE--BSS-EE--EEEEEE-SHHHHHHHHHHHHH
1ril_dssp -----EEEEEEESSTTEEEEEEEEE-BTTB--EE--EEEEE-HHHHHHHHHHHHHH
Similar -00111111111111111111111111111111111111111111111111111111
1rdd ALKEHCEVILSTDSQYVRQGIT QWIHNWKKRGWKTADKKPVKNVDLWQRLDAALGQ
1ril ALKEPCEVDLYTDSHYLKKAFTeGWLEGWRKRGWRTAEGKPVKNRDLWEALLLAMAP
1rdd_dssp T--S--EEEEEE--SSHHHHHT TTHHHHHHHTSB-SS--B-TTHHHHHHHHHHTTS
1ril_dssp S--S--EEEEE---HHHHHHHHsSHHHHHHHTTSB-TTSSB-TTHHHHHHHHHHHTT
Similar 1111111111111111111111-1111111111111111111111111111111111
1rdd HQIKWEWVkgHA GHPENERCDELARAAAMNptLEdtgyqve
1ril HRVRFHFV kGHtGHPENERVDREARRQAQS qAK
1rdd_dssp SEEEEEE---SS SSHHHHHHHHHHHHHHTS--B--tt--s-
1ril_dssp SEEE---- -GGgS-THHHHHHHHHHHHHTS s--
Similar 11111111-011-111111111111111111-011-------
1rdd MLKQVEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMELMAAIVALE
2rn2 MLKQVEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMELMAAIVALE
1rdd_dssp -BSS-EEEEEEEESSTTEEEEEEEEE--BSS-EE--EEEEEE-SHHHHHHHHHHHHH
2rn2_dssp --SSEEEEEEEEESSTTEEEEEEEEEEETTEEEEEEEEEEEE-HHHHHHHHHHHHHH
Similar 111111111111111111111111111111111111111111111111111111111
1rdd ALKEHCEVILSTDSQYVRQGITQWIHNWKKRGWKTADKKPVKNVDLWQRLDAALGQH
2rn2 ALKEHCEVILSTDSQYVRQGITQWIHNWKKRGWKTADKKPVKNVDLWQRLDAALGQH
1rdd_dssp T--S--EEEEEE--SSHHHHHTTTHHHHHHHTSB-SS--B-TTHHHHHHHHHHTTSS
2rn2_dssp T--S--EEEEEE--HHHHHHHHHTHHHHHHTTSB-TTS-B-TTHHHHHHHHHHHTTS
Similar 111111111111111111111111111111111111111111111111111111111
1rdd QIKWEWVkGHA GHPENERCDELARAAAMNPTLEDTGYQVE
2rn2 QIKWEWV KGHaGHPENERCDELARAAAMNPTLEDTGYQVE
1rdd_dssp EEEEEE---SS SSHHHHHHHHHHHHHHTS--B--TT--S-
2rn2_dssp EEEEEE- -TTs--HHHHHHHHHHHHHHTS--B--TT--S-
Similar 1111111-111-11111111111111111111111111111
1sgpi VDCSEYPKPACTAEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGK
2ovo laavsVDCSEYPKPACTMEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGK
1sgpi_dssp ---TT---S-EE--B--EEETTS-EESSHHHHHHHHHHTTT---EEEES-
2ovo_dssp --ss----TT---S--------EEETTS-EESSHHHHHHHHHHTTT---EEEES-
Similar -----11111111111111111111111111111111111111111111111111
1shda siqaeEWYFGKITRRESERLLLNAENPRGTFLVRES eaYCLSVSDFDNAKGLN
1shaa aeEWYFGKITRRESERLLLNPENPRGTFLVRESettkgaYCLSVSDFDNAKGLN
1shda_dssp -ggg-TTB--S--HHHHHHHH-SSSS-TTEEEEEE- --EEEEEEEEETTTEEE
1shaa_dssp --TTEEES--HHHHHHHHT-TTS-TT-EEEEE-ssstt-EEEEEEEEETTTEEE
Similar ---001111111111111111111111111111111----00111111111111111
1shda VKHYKIRKLDSGGFYITSRTQFNSLQQLVAYYSKHADGLCHRLTTVC
1shaa VKHYKIRKLDSGGFYITSRTQFSSLQQLVAYYSKHADGLCHRLTNVCp
1shda_dssp EEEEEEEE-TTS-EESSTT--BSSHHHHHHHHHH--TTSSS---EE-
1shaa_dssp EEEEEEEE-TTS-EESSTT-EESSHHHHHHHHTT--TTSSS---SB--
Similar 11111111111111111111111111111111111111111111111-
1sup AQSVPYGVSQIKAPALHSQGYTGSNVKVAVIDSGIDsSHPDLKVAGGASMVPSeTNP
1mpt AQSVPWGISRVQAPAAHNRGLTGSGVKVAVLDTGIS THPDLNIRGGASFVPG EPS
1sup_dssp -----HHHHHTTHHHHHHHT-S-TT-EEEEEES---tT-TT--EEEEEE--SS---T
1mpt_dssp -----HHHHHTTHHHHHHTT---TT-EEEEEES--- --TT--EEEEEE-STT ---
Similar 111111111111111111111111111111111111-1111111111111111-111
1sup FQDNNSHGTHVAGTVAALNNSIGVLGVAPSASLYAVKVLGADGSGQYSWIINGIEWA
1mpt TQDGNGHGTHVAGTIAALNNSIGVLGVAPSAELYAVKVLGASGSGSVSSIAQGLEWA
1sup_dssp T--SSSHHHHHHHHHH--SSSSS---SSTT-EEEEEE-B-TTS-B-HHHHHHHHHHH
1mpt_dssp S--SSSHHHHHHHHHH--SSSSS---SSTT-EEEEEE-S-TTS---HHHHHHHHHHH
Similar 111111111111111111111111111111111111111111111111111111111
1sup IANNMDVINMSLGGPSGSAALKAAVDKAVASGVVVVAAAGNEgtsgsssTVGYPGKY
1mpt GNNGMHVANLSLGSPSPSATLEQAVNSATSRGVLVVAASGNS gagSISYPARY
1sup_dssp HHTT-SEEEE---BS---HHHHHHHHHHHHTT-EEEEE--S---bttb----BTTTS
1mpt_dssp HHTT-SEEEE---BSS--HHHHHHHHHHHHTT-EEEEE--SS --sS--BTTTS
Similar 111111111111111111111111111111111111111111----00011111111
1sup PSVIAVGAVDSSNQRASFSSVGPELDVMAPGVSIQSTLPGNKYGAYNGTSMASPHVA
1mpt ANAMAVGATDQNNNRASFSQYGAGLDIVAPGVNVQSTYPGSTYASLNGTSMATPHVA
1sup_dssp TTSEEEEEE-TTS-B-TT---STT--EEEE-SSEEEEETTTEEEEE-SHHHHHHHHH
1mpt_dssp TTSEEEEEE-TTS-B-TT---STT--EEEE-SSEEEEETTTEEEEE-SHHHHHHHHH
Similar 111111111111111111111111111111111111111111111111111111111
1sup GAAALILSKHPNWTNTQVRSSLENTTTKLGDSFYYGKGLINVQAAA
1mpt GVAALVKQKNPSWSNVQIRNHLKNTATGLGNTNLYGSGLVNAEAAT
1sup_dssp HHHHHHHHH-TT--HHHHHHHHHHT-B--S-HHHHTT-B--HHHHT
1mpt_dssp HHHHHHHHH-TT--HHHHHHHHHHTSB--S-HHHHTT-B--HHHHT
Similar 1111111111111111111111111111111111111111111111
1tada.1 YSLEECLEFIAIIYGNTLQSILAIVRAMTTLNIQYGDSARQDDARKLMHMAdtieEG 1gia.1 YSEEECKQYKAVVYSNTIQSIIAIIRAMGRLKIDFGDAARADDARQLFVLAgaaeEG 1tada.1_ds --HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT---SSTTHHHHHHHHHHHHhhs-TT 1gia.1_dss --HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT---SSTTHHHHHHHHHHHHhhhhTT Similar 111111111111111111111111111111111111111111111111111000011 1tada.1 TMPKEMSDIIQRLWKDSGIQACFDRASEYQLNDSAGYYLSDLERLVTPGYVPTEQDV 1gia.1 FMTAELAGVIKRLWKDSGVQACFNRSREYQLNDSAAYYLNDLDRIAQPNYIPTQQDV 1tada.1_ds ---HHHHHHHHHHHH-HHHHHHHHTGGGS---TTHHHHHTTHHHHTSTT----HHHH 1gia.1_dss ---HHHHHHHHHHHH-HHHHHHHTTGGGS---TTHHHHHTTHHHHTSTT----HHHH Similar 111111111111111111111111111111111111111111111111111111111 1tada.1 LRSRVK 1gia.1 LRTRVK 1tada.1_ds HH---- 1gia.1_dss HH---- Similar 111111
1tgxa LKCNQlippFWKTCPKGKNLCYKMTM RAApmVPVKRGCIDVCPKSSLLIKYMCCNT
1cdta LKCNKlipiAYKTCPEGKNLCYKMMLaSKK mVPVKRGCINVCPKNSALVKYVCCST
1tgxa_dssp -EEE-ssttSEEE--TT--EEEEEEE TTBtt--SEEEEESS-----SSEEEEEE-S
1cdta_dssp -EEE-sstt-EEE--TT--EEEEEEEtTTT -EEEEEEEESS-----SSEEEEEE-S
Similar 11111000011111111111111111-111-01111111111111111111111111
1tgxa DKC
1cdta DRC
1tgxa_dssp TT-
1cdta_dssp TT-
Similar 111
1tlca MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSI
4tms mlEQPYLDLAKKVLDEGHFKPDRTHTGTYSIFGHQMRFDLSKGFPLLTTKKVPFGLI
1tlca_dssp -HHHHHHHHHHHHH-EEE--TTSS-EEEEEEEEEEEEGGG------SS---HHHH
4tms_dssp -tTHHHHHHHHHHHHH-EEE--SSSS-EEEEEEEEEEEEGGG-----SSS---HHHH
Similar --1111111111111111111111111111111111111111111111111111111
1tlca IHELLWFLQGDTNIAYLHENNVTIWDEWa
4tms KSELLWFLHGDTNIRFLLQHRNHIWDEWafekwvksdeyhgpdmtdfghrsqkdpef
1tlca_dssp HHHHHHHHHT--BTHHHHHTT--TTTTT-
4tms_dssp HHHHHHHHHT--BHHHHHTTT--TTHHHhhhhhhhstt--ss---shhhhhhs-sth
Similar 11111111111111111111111111110----------------------------
1tlca denGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQL
4tms aavyheemakfddrvlhddafaakyGDLGLVYGSQWRAWHTSKGDTIDQLGDVIEQI
1tlca_dssp -ttSB--S-HHHHHHHEE-TTS-EE-HHHHHHHHH
4tms_dssp hhhhhhhhhhhhhhhhh-hhhhhhhTB-SSSHHHHHH-EE-TTS-EE-HHHHHHHHH
Similar ----------------------00011111111111111111111111111111111
1tlca KNDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPF
4tms KTHPYSRRLIVSAWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPF
1tlca_dssp HH-TT-S--EEE---GGGGGG-SS--SEEEEEEEEETTEEEEEEEEEEEETTTTHHH
4tms_dssp HH-TT-S--EEE---TTTTTT-SS--SEEEEEEEEETTEEEEEEEEEEEETTTTHHH
Similar 111111111111111111111111111111111111111111111111111111111
1tlca NIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIK
4tms NIASYALLTHLVAHECGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLN
1tlca_dssp HHHHHHHHHHHHHHHHT-EEEEEEEEEEEEEEEGGGHHHHHHHTTS------EEEE-
4tms_dssp HHHHHHHHHHHHHHHHT-EEEEEEEEEEEEEEEGGGHHHHHHHTTS------EEEE-
Similar 111111111111111111111111111111111111111111111111111111111
1tlca RKPeSIFDYRFEDFEIEGYDPHPGIKAPVA
4tms PDKhDIFDFDMKDIKLLNYDPYPAIKAPVA
1tlca_dssp ---sSGGG--GGGEEEES------------
4tms_dssp TT---GGG--GGGEEEE-------------
Similar 111011111111111111111111111111
1ton IVGGYKCEKNSQPWQVAVI nEyLCGGVLIDPSWVITAAHCYSNNYQVLLGRNNLF
2pkaab IIGGRECEKNSHPWQVAIYhysSfQCGGVLVNPKWVLTAAHCKNDNYEVWLGRHNLF
1ton_dssp -BS-EE--TTS-TTEEEEE sSsEEEEEEEETTEEEE-GGG--S--EEEES-SBTT
2pkaab_dss -BS-EE--TTS-TTEEEEEettEeEEEEEEEETTEEEE-GGG--S--EEEES-SBTT
Similar 1111111111111111111--010111111111111111111111111111111111
1ton KDEPFAQRRLVRQSFRHPDYIp lpvHDHSNDLMLLHLSEPADITGGVKVIDLPTKE
2pkaab ENENTAQFFGVTADFPHPGFNlsadgKDYSHDLMLLRLQSPAKITDAVKVLELPTQE
1ton_dssp S--TT-EEE-EEEEEE-TT--- -----STT--EEEEESS-----SS--------S-
2pkaab_dss S--TT-EEEEEEEEEE-TTTTt----SB-TT--EEEEESS-----SS-------SS-
Similar 1111111111111111111110-0001111111111111111111111111111111
1ton PKVGSTCLASGWGSTNP sEMVVSHDLQCVNIHLLSNEK ciETykdnvTDVM
2pkaab PELGSTCEASGWGSIEPgpdDFEFPDEIQCVQLTLLQNTFcadahpDK vTESM
1ton_dssp --TT-EEEEEESS-SSS sS----SB-EEEEEEEE-GGG -gGGgsttgGGGE
2pkaab_dss --TT-EEEEEESS-SS--ss-----SB-EEEEEEEE-HHHhhhh-sSB --TTE
Similar 11111111111111111--011111111111111111111----0111----01111
1ton LCAGEMEGGKDTCAGDSGGPLICDGVLQGITSGGaTPCAKPKTPAIYAKLIKFTSWI
2pkaab LCAGYLPGGKDTCMGDSGGPLICNGMWQGITSWGhTPCGSANKPSIYTKLIFYLDWI
1ton_dssp EEEE-TT-S-B--TT-TT-EEEETTEEEEEE----SS-S-TT--EEEEEGGGGHHHH
2pkaab_dss EEEE-TTSS-B--TT-TT-EEEETTEEEEEE----SSTT-TT--EEEEEGGGGHHHH
Similar 111111111111111111111111111111111101111111111111111111111
1ton KKVMKEN
2pkaab DDTITEN
1ton_dssp HHHHHH-
2pkaab_dss HHHHHH-
Similar 1111111
1top asmtdqqaearaflsEEMIAEFKAAFDMFDadGGGDISTKELGTvmrmlgqnptkee
1cll ltEEQIAEFKEAFSLFDkdGDGTITTKELGTvmrslgqnpteae
1top_dssp --hhhhhhhhhhhs-HHHHHHHHHHHHTTT-s-SSEEEGGGHHHhhhhtt----hhh
1cll_dssp -hHHHHHHHHHHHHHH-tt-SSEE-HHHHHHhhhttt----hhh
Similar -------------00111111111111111001111111111110000000000000
1top LDAIIeevdedgsGTIDFEEFLVMMVRQMKEDAKGKseeelancf rIFdkna
1cll LQDMInevdadgnGTIDFPEFLTMMARKMKDTDSEEeireafrvfdkdgngYI
1top_dssp HHHHHhhh-tts--EEEHHHHHHHHHHHHHHHHHHHhhhhhhhhh hHH-tt-
1cll_dssp HHHHHhhh-tt-sSSEEHHHHHHHHHHHHHHHHHHHhhhhhhhhh-tt-ssSB
Similar 111110000000011111111111111111111111000000000-----011----
1top dgfidiEELGEILratgEHvteeDIedlmkdsdk nndgridfdefLkMMegv
1cll saAELRHVM tnLG eKLtdeevdemireadidgdgqvnyeefVqMMt
1top_dssp ss-b-hHHHHHHHhttt----hhHHhhhhhhh-t t-sssb-hhhhHhHHhs-
1cll_dssp -hHHHHHHH hhTT ----hhhhhhhhhhh-ss-sssb-hhhhHhHHh
Similar ----001111111--0011---011000000000-----0000000000010110--
1trna IVGGYNCEENSVPYQVSLNSGYHFCGGSLINEQWVVSAGHCYKSRIQVRLGEHNIEV
4ptp IVGGYTCGANTVPYQVSLNSGYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINV
1trna_dssp -BS-EE--TTS-TTEEEEESSSEEEEEEEEETTEEEE-GGG--SS-EEEES-SBSSS
4ptp_dssp -BS-EE--TTSSTTEEEEESSSEEEEEEEEETTEEEE-GGG--SS-EEEES-SSTTS
Similar 111111111111111111111111111111111111111111111111111111111
1trna LEGNEQFINAAKIIRHPQYDRKTLNNDIMLIKLSSRAVINARVSTISLPTAPPATGT
4ptp VEGNEQFISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCASAGT
1trna_dssp --S--EEEEEEEEEE-TT--TTT-TT--EEEEESS----SSSS---B--SS---TT-
4ptp_dssp --S--EEEEEEEEEE-TT--TTT-TT--EEEEESS-----SSS---B--SS---TT-
Similar 111111111111111111111111111111111111111111111111111111111
1trna KCLISGWGNTASSGADYPDELQCLDAPVLSQAKCEASYPGKITSNMFCVGFLEGGKD
4ptp QCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQITSNMFCAGYLEGGKD
1trna_dssp EEEEEES---SSSS----SB-EEEEEEEE-HHHHHHHSTTT--TTEEEES-TT-SSB
4ptp_dssp EEEEEES----SSS----SS-EEEEEEB--HHHHHHHSTTT--TTEEEES-TT-S-B
Similar 111111111111111111111111111111111111111111111111111111111
1trna SCQGDSGGPVVCNGQLQGVVSWGDGCAQKNKPGVYTKVYNYVKWIKNTIAAn
4ptp SCQGDSGGPVVCSGKLQGIVSWGSGCAQKNKPGVYTKVCNYVSWIKQTIAS
1trna_dssp --TT-TT-EEEETTEEEEEEEE-SSSSBTTB-EEEEEGGGGHHHHHHHHHHt
4ptp_dssp --TT-TT-EEEETTEEEEEEEE-SSSS-TT--EEEEEGGGGHHHHHHHHHT
Similar 111111111111111111111111111111111111111111111111111-
1ulb MENGYTYEDYKNTAEWLLSHTKHRPQVAIICGSGLGGLTDKLTQAQIFDYSEIPNFP
1pbn MANGYTYEDYQDTAKWLLSHTEQRPQVAVICGSGLGGLVNKLTQAQTFDYSEIPNFP
1ulb_dssp ---SS-HHHHHHHHHHHHTT-S---SEEEEE-SS-GGGGTT-SS-EEEETTTSTTS-
1pbn_dssp ------HHHHHHHHHHHHTS-S---SEEEEE-SS-HHHHTT-EEEEEEEGGGSTT--
Similar 111111111111111111111111111111111111111111111111111111111
1ulb RSTvPGhAGRLVFGFLNGRACVMMQGRFHMYEGYPLWKVTFPVRVFHLLGVDTLVVT
1pbn ESTvPGhAGRLVFGILNGRACVMMQGRFHMYEGYPFWKVTFPVRVFRLLGVETLVVT
1ulb_dssp ---sSS---EEEEEEETTEEEEEEES---GGGT--HHHHTHHHHHHHHHT--EEEE-
1pbn_dssp ---sTT---EEEEEEETTEEEEEEES---GGGT--HHHHTHHHHHHHHHT--EEEEE
Similar 111011011111111111111111111111111111111111111111111111111
1ulb NAAGGLNPKFEVGDIMLIRDHINLPGFSGQNPLRGPNDERFGDRFPAMSDAYDRTMR
1pbn NAAGGLNPNFEVGDIMLIRDHINLPGFSGENPLRGPNEERFGVRFPAMSDAYDRDMR
1ulb_dssp -EE---STT--TT--EEEEEEEEGGGTTT--TT-SS--TTT--SS---TT-B-SHHH
1pbn_dssp EEEEE-STT--TT-EEEEEEEEEHHHHTT--TT-SS--TTT--SS---TT-S-HHHH
Similar 111111111111111111111111111111111111111111111111111111111
1ulb QRALSTWKQMGEQRELQEGTYVMVAGPSFETVAECRVLQKLGADAVGMSTVPEVIVA
1pbn QKAHSTWKQMGEQRELQEGTYVMLGGPNFETVAECRLLRNLGADAVGMSTVPEVIVA
1ulb_dssp HHHHHHHHHTT-SS--EEEEEEE---SS---HHHHHHHHHHT-SEEESSSHHHHHHH
1pbn_dssp HHHHHHHHHTT-SS--EEEEEEE---SS---HHHHHHHHHTT-SEEESSSHHHHHHH
Similar 111111111111111111111111111111111111111111111111111111111
1ulb RHCGLRVFGFSLIT NKVIMdYESLEKANHEEVLAAGKQAAQKLEQFVSILMASIPL
1pbn RHCGLRVFGFSLITnKVIMD TESQGKANHEEVLEAGKQAAQKLEQFVSLLMASIPV
1ulb_dssp HTTT--EEEEEEE- ------SS------STTTTTTTTHHHHHHHHHHHHGGGGS--
1pbn_dssp HHTT-EEEEEEEEEeE---S SSSS-S---GGGGTSSSTTHHHHHHHHHHHHHHSSS
Similar 11111111111111-11111-111111111111111111111111111111111111
1ulb pdka
1pbn sght
1ulb_dssp tttt
1pbn_dssp s-s-
Similar 0000
1xaa MKVAVLPGDGIGPEVTEAALKVLRALDEAEGLGLAYEVFPFGGAAIDAFGEPFPEPT
1xac MKVAVLPGDGIGPEVTEAALKVLRALDEAEGLGLAYEVFPFGGAAIDAFGEPFPEPT
1xaa_dssp -EEEEEEESTTHHHHHHHHHHHHHHHHHHH----EEEE---THHHHHHHSSSS-HHH
1xac_dssp -EEEEEEESTTHHHHHHHHHHHHHHHHHHHT---EEEE---THHHHHHHSSSS-HHH
Similar 111111111111111111111111111111111111111111111111111111111
1xaa RKGVEEAEAVLLGSVGGPKWDGLPRKIRPETGLLSLRKSQDLFANLRPAKVFPGLER
1xac RKGVEEAEAVLLGSVGGPKWDQNPRELRPEKGLLSIRKQLDLFANLRPVKVFESLSD
1xaa_dssp HHHHHH-SEEEEEE---HHHHTS-GGG-HHHHHHHHHHHTTEEEEEEEEE--TT-GG
1xac_dssp HHHHHHSSEEEEEE---GGGTTS-STTSTTHHHHHHHHHTTEEEEEEEEE--GGGGG
Similar 111111111111111111111111111111111111111111111111111111111
1xaa LSPLKEEIARGVDVLIVRELTGGIYFGEPRGMSEAEAWNTERYSKPEVERVARVAFE
1xac ASPLKKEYIDNVDFVIVRELTGGIYFGEPRGMSEAEAWNTERYSKPEVERVARVAFE
1xaa_dssp GSSS-HHHHTT-EEEEEEE-S-STTT-SS-EE-SS-EE------HHHHHHHHHHHHH
1xac_dssp GSSS-HHHHTT-EEEEEEE-S-GGGT-S-EEE-SS-EEE-----HHHHHHHHHHHHH
Similar 111111111111111111111111111111111111111111111111111111111
1xaa AARKRRKHVVSVDKANVLEVGEFWRKTVEEVGRGYPDVALEHQYVDAMAMHLVRSPA
1xac AARKRRKHVVSVDKANVLEVGEFWRKTVEEVGRGYPDVALEHQYVDAMAMHLVRSPA
1xaa_dssp HHHTTTSEEEEEE-TTT-HHHHHHHHHHHHHHTT-TTSEEEEEEHHHHHHHHHH-GG
1xac_dssp HHHTTT-EEEEEE-TTT-HHHHHHHHHHHHHGGG-TTSEEEEEEHHHHHHHHHH-GG
Similar 111111111111111111111111111111111111111111111111111111111
1xaa RFDVVVTGNIFGDILSDLASVLPGSLGLLPSASLGRGTPVFEPVHGSAPDIAGKGIA
1xac RFDVVVTGNIFGDILSDLASVLPGSLGLLPSASLGRGTPVFEPVHGSAPDIAGKGIA
1xaa_dssp G-SEEEE-HHHHHHHHHHHHHSSS-GGG-EEEEEESS--EEEESS---GGGTTSS--
1xac_dssp G-SEEEE-HHHHHHHHHHHTTSS-S-S--EEEEEESS--EEEESS---GGGTTSS--
Similar 111111111111111111111111111111111111111111111111111111111
1xaa NPTAAILSAAMMLEHAFGLVELARKVEDAVAKALLETPPPDLGGSAGTEAFTATVLR
1xac NPTAAILSAAMMLEHAFGLVELARKVEDAVAKALLETPPPDLGGSAGTEAFTATVLR
1xaa_dssp --HHHHHHHHHHHHHTT--HHHHHHHHHHHHHHHHHS--GGGTS---HHHHHHHHHH
1xac_dssp --HHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHS--GGGT----HHHHHHHHHT
Similar 111111111111111111111111111111111111111111111111111111111
1xaa HL
1xac HL
1xaa_dssp HH
1xac_dssp TT
Similar 11
1ymb GLSDGEWQQVLNVWGKVEADIAGHGQEVLIRLFTGHPETLEKFDKFKHLKTEAEMKA
1mnia GLSDGEWQLVLNVWGKVEADVAGHGQEVLIRLFKGHPETLEKFDKFKHLKSEDEMKA
1ymb_dssp ---HHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHH-HHHHTT-TTTTT--SHHHHHT
1mnia_dssp ---HHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHH-GGGGGG-GGGTT--SHHHHHH
Similar 111111111111111111111111111111111111111111111111111111111
1ymb SEDLKKHGTVVLTALGGILKKKGHHEAELKPLAQSHATKHKIPIKYLEFISDAIIHV
1mnia SEDLKKVGNTHLTALGGILKKKGHHEAELTPLAQSHATKHKIPVKYLEFISEAIIQV
1ymb_dssp -HHHHHHHHHHHHHHHHHHHTTT--HHHHHHHHHHHHHTT---HHHHHHHHHHHHHH
1mnia_dssp -HHHHHHHHHHHHHHHHHHTTTT--HHHHHHHHHHHHHTS---THHHHHHHHHHHHH
Similar 111111111111111111111111111111111111111111111111111111111
1ymb LHSKHPGDFGADAQGAMTKALELFRNDIAAKYKELGfq
1mnia LQSKHPGDFGADAQGAMSKALELFRNDMAAKYKELGfq
1ymb_dssp HHHHSTTTS-HHHHHHHHHHHHHHHHHHHHHHHHTT--
1mnia_dssp HHHH-TTTS-HHHHHHHHHHHHHHHHHHHHHHHHTT--
Similar 11111111111111111111111111111111111100
2aaib.1 ADVCM dPEPIVRIVGRNGLCVDVRDGRFHNGNAIQLWPCKSNTDANQLWTLK 1abrb.1 ivekSKICSsrYEPTVRIGGRDGMCVDVYDNGYHNGNRIIMWKCKDRLEENQLWTLK 2aaib.1_ds --B-- ----EE-EE-GGG-EEEEGGG--STT-BEEEE---SS--GGG-EEE- 1abrb.1_ds --s---B--s----EE-EE-GGG-EEEEGGG--STT-BEEEE---SS--GGG-EEE- Similar ----11111-01111111111111111111111111111111111111111111111 2aaib.1 RDNTIRSNGKCLTTYGYSPGVYVMIYDCNTAATDATRWQIWDNGTIINPRSSLVLAA 1abrb.1 SDKTIRSNGKCLTTYGYAPGSYVMIYDCTSAVAEATYWEIWDNGTIINPKSALVLSA 2aaib.1_ds TTSBEEETTEEEEES-SSTT-BEEEEETTTS-GGGSB-EE-TTS-EEEETTEEEEE- 1abrb.1_ds TTSBEEETTEEEEES-SSTT-BEEEE-TTTS-GGGSB-EE-TTS-EEETTTTEEEE- Similar 111111111111111111111111111111111111111111111111111111111 2aaib.1 TSGNSGTTLTVQTNIYAVSQGWLPT 1abrb.1 ESSSMGGTLTVQTNEYLMRQGWRTG 2aaib.1_ds SS-STT-B-EEEE----GGG--EE- 1abrb.1_ds --SSTT-B-EEE-----GGG--EES Similar 1111111111111111111111111
2act LPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKITSGSLISLSEQELIDCG
1ppo LPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCE
2act_dssp --S-EEGGGGT------B-TTS--HHHHHHHHHHHHHHHHHHS----B-HHHHHHH-
1ppo_dssp --S-EETTTTT------B--SSB-HHHHHHHHHHHHHHHHHHS----B-HHHHHHH-
Similar 111111111111111111111111111111111111111111111111111111111
2act rtqnTRGCDGGYITDGFQFIINdGGINTEENYPYTAQDGDC dVAlqdQKYVTIDTY
1ppo rrSHGCKGGYPPYALEYVAK NGIHLRSKYPYKAKQGTCraKQ vgGPIVKTSGV
2act_dssp -bttB-GGG---HHHHHHHHHHhT-B-BTTTS---SS---- -HHhhh---B---EE
1ppo_dssp ssS-TTB---HHHHHHHHHH H-B-BTTTS---SS-----gGG --S--B---EE
Similar --00111111111111111111-111111111111111111-011-00111111111
2act ENVPYNNEWALQTAVTYQPVSVALDAAGDAFKQYASGIFTGPCGTAVDHAIVIVGYG
1ppo GRVQPNNEGNLLNAIAKQPVSVVVESKGRPFQLYKGGIFEGPCGTKVDHAVTAVGYG
2act_dssp EE--TT-HHHHHHHHHHS-EEEEE---SHHHHH--SSEE-----SS--EEEEEEEEE
1ppo_dssp EE--SS-HHHHHHHHHHS-EEEEE---SHHHHH--SSEE--S--S---EEEEEEEEE
Similar 111111111111111111111111111111111111111111111111111111111
2act TEGGVDYWIVKNSWDTTWGEEGYMRILRNV gGAGTCGIATMPSYPVK
1ppo KSGGKGYILIKNSWGTAWGEKGYIRIKRAPgnSPGVCGLYKSSYYPTK
2act_dssp EETTEEEEEEE-SB-TTSTBTTEEEEE--- -TT-GGGTTSS-EEEE-
1ppo_dssp EETTEEEEEEE-SB-SSSTBTTEEEEE---ssSS-GGGTTS--EEEE-
Similar 111111111111111111111111111111-01111111111111111
2cpl vNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHR
1cyna gpkvTVKVYFDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEKGFGYKNSKFHR
2cpl_dssp ---EEEEEEEETTEEEEEEEEEE-TTT-HHHHHHHHHHHHTTTS--STT-B--E
1cyna_dssp --eeEEEEEEEEEETTEEEEEEEEEE-TTTSHHHHHHHHHHHHTTTS--STT-BEEE
Similar ---011111111111111111111111111111111111111111111111111111
2cpl IIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQF
1cyna VIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQF
2cpl_dssp EETTTEEEE--TTTSSSS---BTTBS-B------S---STTEEEE--SSTT-B-S-E
1cyna_dssp EETTTEEEE--TTTSSSS---BTTBS-B------S---STTEEEE--SSTT-B-S-E
Similar 111111111111111111111111111111111111111111111111111111111
2cpl FICTAKTEWLDGKHVVFGKVKEGMNIVEAMER FGsrNGKTSKKITIADCGQL
1cyna FITTVKTAWLDGKHVVFGKVLEGMEVVRKVEStKTdsRDKPLKDVIIADCGKIevek
2cpl_dssp EEESS--GGGTTTS-EEEEEEE-HHHHHHHHT T--tTS--SS-EEEEEEEE-
1cyna_dssp EEESS--GGGTTTS-EEEEEEE-HHHHHHHHTs-B-tTS-BSS-EEEEEEEEEeeee
Similar 11111111111111111111111111111111-11001111111111111111----
2cpl
1cyna pfaiak
2cpl_dssp
1cyna_dssp eee-s-
Similar ------
2cro mqTLSERLKKRRIALKMTQTELATKAGVKQQSIQLIEAGVTKRPRFLFEIAMALNCD
1r69 SISSRVKSKRIQLGLNQAELAQKVGTTQQSIEQLENGKTKRPRFLPELASALGVS
2cro_dssp --SHHHHHHHHHHHTT--HHHHHHHHTS-HHHHHHHHTT--SS-TTHHHHHHHTTS-
1r69_dssp -HHHHHHHHHHHTT--HHHHHHHHTS-HHHHHHHHTTS-SS-TTHHHHHHHTT--
Similar --1111111111111111111111111111111111111111111111111111111
2cro PVWLQYG
1r69 VDWLLNG
2cro_dssp HHHHHH-
1r69_dssp HHHHHH-
Similar 1111111
2f19l.1 DIQMTQTTSSLSASLGDRVTISCRASQDI sNYLNWYQQKPDGTVKLLIYYTS 1igfl.1 DVLMTQTPLSLPVSLGDQASISCRSNQTIllsdgdTYLEWYLQKPGQSPKLLIYKVS 2f19l.1_ds ---EEES-SEEEE-TT--EEEEEEESS-- tT-EEEEEE-SSS-EEEEEETTT 1igfl.1_ds ---EEEE-SEEEE-TTS-EEEEEEESS----tts---EEEEEE-TTS--EEEEETTT Similar 11111111111111111111111111111-----01111111111111111111111 2f19l.1 RLHSGVPSRFSGSGSGTDYSLTISNLEHEDIATYFCQQGSTLPRTFGGGTKLEIk 1igfl.1 NRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPPTFGGGTKLEI 2f19l.1_ds EE-TT--TTEEEEEETTEEEEEESS--GGG-SEEEEEE-SSSS-EE---EEEEE- 1igfl.1_ds EE-SS--TTEEEEEETTEEEEEESS--GGG-EEEEEEE-SSSS-EE---EEEEE Similar 111111111111111111111111111111111111111111111111111111-
2gbp ADTRIGVTIYKYDDNFMSVVRKAIEQDAKAAPDVQLLMNDSQNDQSKQNDQIDVLLA
1gca ADTRIGVTIYKYDDNFMSVVRKAIEKDGKSAPDVQLLMNDSQNDQSKQNDQIDVLLA
2gbp_dssp --EEEEEEES-TT-HHHHHHHHHHHHHHTT-TTEEEEEEE-TT-HHHHHHHHHHHHH
1gca_dssp --EEEEEEES-TT-HHHHHHHHHHHHHHHTSTTEEEEEEE-TT-HHHHHHHHHHHHH
Similar 111111111111111111111111111111111111111111111111111111111
2gbp KGVKALAINLVDPAAAGTVIEKARGQNVPVVFFNKEPSRKALDSYDKAYYVGTDSKE
1gca KGVKALAINLVDPAAAGTVIEKARGQNVPVVFFNKEPSRKALDSYDKAYYVGTDSKE
2gbp_dssp TT-SEEEE--SSGGGHHHHHHHHHTTT--EEEESS---HHHHHT-TTEEEEE--HHH
1gca_dssp TT-SEEEE--SSGGGHHHHHHHHHHTT--EEEESS---HHHHHT-TTEEEEE--HHH
Similar 111111111111111111111111111111111111111111111111111111111
2gbp SGIIQGDLIAKHWAANQGWDLNKDGQIQFVLLKGEPGHPDAEARTTYVIKELNDKGI
1gca SGVIQGDLIAKHWQANQGWDLNKDGKIQYVLLKGEPGHPDAEARTTYVVKELNDKGI
2gbp_dssp HHHHHHHHHHHHHHH-GGG-TT-SSSEEEEEEE-STT-HHHHHHHHHHHHHHHHTT-
1gca_dssp HHHHHHHHHHHHHHH-GGG-TT-SSSEEEEEEE-STT-HHHHHHHHHHHHHHHHTT-
Similar 111111111111111111111111111111111111111111111111111111111
2gbp KTEQLQLDTAMWDTAQAKDKMDAWLSGPNANKIEVVIANNDAMAMGAVEALKAHNKS
1gca QTEQLALDTAMWDTAQAKDKMDAWLSGPNANKIEVVIANNDAMAMGAVEALKAHNKS
2gbp_dssp -EEEEEEEE-TT-HHHHHHHHHHHTTSTTTTT--EEEESSHHHHHHHHHHHHHTT-T
1gca_dssp -EEEEEEEE-TT-HHHHHHHHHHHHTSTTGGG--EEEESSHHHHHHHHHHHHHTT-T
Similar 111111111111111111111111111111111111111111111111111111111
2gbp SIPVFGVDALPEALALVKSGALAGTVLNDANNQAKATFDLAKNLADGKGAADGTNWK
1gca SIPVFGVDALPEALALVKSGAMAGTVLNDANNQAKATFDLAKNLAEGKGAADGTSWK
2gbp_dssp TS-EE-SB--HHHHHHHHHTSSSBEEE--HHHHHHHHHHHHHHHHTTS-TTTTS---
1gca_dssp TS-EE-SB--HHHHHHHHHTSS-BEEE--HHHHHHHHHHHHHHHHTTS-TTTTS---
Similar 111111111111111111111111111111111111111111111111111111111
2gbp IDNKVVRVPYVGVDKDNLAEFSk
1gca IENKIVRVPYVGVDKDNLSEFTq
2gbp_dssp -BTTEEE---EEE-TTTGGGTS-
1gca_dssp -BTTEEE---EEE-TTTGGGTS-
Similar 11111111111111111111110
2gsta.1 LCGETEEERIRADIVENQVMDNRMQLIMLCYNPDFEKQKPEFLKTIPEKMKLYSEFL 1hna.1 LCGESEKEQIREDILENQFMDSRMQLAKLCYDPDFEKLKPEYLQALPEMLKLYSQFL 2gsta.1_ds -S-SSHHHHHHHHHHHHHHHHHHHHHHHHHT-TTHHHHHHHHHHTHHHHHHHHHHHH 1hna.1_dss -S--SHHHHHHHHHHHHHHHHHHHHHHHTTS-S-HHHHHHHHHHHHHHHHHHHHHHH Similar 111111111111111111111111111111111111111111111111111111111 2gsta.1 GKRPWFAGDKVTYVDFLAYDILDQYHIFEPKCLDAFPNLKDFLARFEGLKKISAYMK 1hna.1 GKQPWFLGDKITFVDFIAYDVLERNQVFEPSCLDAFPNLKDFISRFEGLEKISAYMK 2gsta.1_ds TT-SSSSSSS--HHHHHHHHHHHHHHHHSTTTTTT-HHHHHHHHHHHTSHHHHHHHT 1hna.1_dss TT-SBTTBSS--HHHHHHHHHHHHHHHH-HHHHHT-HHHHHHHHHHHTSHHHHHHHH Similar 111111111111111111111111111111111111111111111111111111111 2gsta.1 SSRylstPIFSKLAQWSN 1hna.1 SSRflprPVFTKMAVFGN 2gsta.1_ds STT------S-TTSSSS- 1hna.1_dss STTs-s--TTTTTSSTT- Similar 111000011111111111
2imm divMTqSPSSLSVSAGERVTMSCKSS qSLlnsgnqknFLAWYQqkpgQPPKLLI
2rhe esvLT QPPSASGTPGQRVTISCTGSatdiGS nSVIWYQqvpgKAPKLLI
2imm_dssp ---EEeE-SEEEE-TT--EEEEEEES s--eettttee-EEEEEe-ttS--EEEE
2rhe_dssp --sSB --SEEEE-TT--EEEEEE--ttttTT s-EEEEE--ttS--EEEE
Similar 00011-11111111111111111111---011-------011111100001111111
2imm YGASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCQn dhsYPLTFGAGTK
2rhe YYNDLLPSGVSDRFSASKSGTSASLAISGLESEDEADYYCAawndslDEPGFGGGTK
2imm_dssp ETTTEE-TT--TTEEEEEETTEEEEEESS--GGG-EEEEEEe -ssSS-EE---EE
2rhe_dssp BTTTB--TT--TTEEEEEETTEEEEEESS--GGG-EEEEEEeeetttTEEEE---EE
Similar 111111111111111111111111111111111111111110--0001111111111
2imm LELK
2rhe LTVLgqp
2imm_dssp EEE-
2rhe_dssp EEE-s--
Similar 1111---
2lbp DDIKVAVVGAMSGPIAQWGIMEFNGAEQAIKDINAKGGIKGDKLVGVEYDDACDPKQ
2liv EDIKVAVVGAMSGPVAQYGDQEFTGAEQAVADINAKGGIKGNKLQIAKYDDACDPKQ
2lbp_dssp -EEEEEEEE-SSSSTHHHHHHHHHHHHHHHHHHHHTTTBTTBEEEEEEEE-TT-HHH
2liv_dssp --EEEEEEE-SSSSSHHHHHHHHHHHHHHHHHHHHTTTBTTB-EEEEEEE-TT-HHH
Similar 111111111111111111111111111111111111111111111111111111111
2lbp AVAVANKIVNDGIKYVIGHLCSSSTQPASDIYEDEGILMISPGATAPELTQRGYQHI
2liv AVAVANKVVNDGIKYVIGHLCSSSTQPASDIYEDEGILMITPAATAPELTARGYQLI
2lbp_dssp HHHHHHHHHTTT--EEEE-SSHHHHHHHHHHHHHTT-EEEESS---TTTTSS--SSE
2liv_dssp HHHHHHHHHHTT--EEEE--SHHHHHHHHHHHHHTT-EEEESS---GGGSSS--SSE
Similar 111111111111111111111111111111111111111111111111111111111
2lbp MRTAGLDSSQGPTAAKYILETVKPQRIAIIHDKQQYGEGLARSVQDGLKAANANVVF
2liv LRTTGLDSDQGPTAAKYILEKVKPQRIAIVHDKQQYGEGLARAVQDGLKKGNANVVF
2lbp_dssp EESS--GGGHHHHHHHHHHHTT--S-EEEEE-SSHHHHHHHHHHHHHHHTTT--EEE
2liv_dssp EE-S--GGGHHHHHHHHHHHTT--SSEEEEE-SSHHHHHHHHHHHHHHHTTT--EEE
Similar 111111111111111111111111111111111111111111111111111111111
2lbp FDGITAGEKDFSALIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGV
2liv FDGITAGEKDFSTLVARLKKENIDFVYYGGYHPEMGQILRQARAAGLKTQFMGPEGV
2lbp_dssp EEE--TT----HHHHHHHHHTT--EEEEES-HHHHHHHHHHHHHTT---EEEE-GGG
2liv_dssp EEE--TT----HHHHHHHHHTT-SEEEEES-HHHHHHHHHHHHHTT---EEEEEGGG
Similar 111111111111111111111111111111111111111111111111111111111
2lbp GNASLSNIAGDAAEGMLVTMPKRYDQDPANQGIVDALKADKKDPSGPYVWITYAAVQ
2liv ANVSLSNIAGESAEGLLVTKPKNYDQVPANKPIVDAIKAKKQDPSGAFVWTTYAALQ
2lbp_dssp --THHHHHHGGGGTT-EEEE---GGG-GGGHHHHHHHHHTT--TT-HHHHHHHHHHH
2liv_dssp --HHHHHHHGGGGTT-EEEE---GGGSGGGHHHHHHHTTTT--TTSSHHHHHHHHHH
Similar 111111111111111111111111111111111111111111111111111111111
2lbp SLaTALERtGSDEPLALVKDLKANGANTVIGPLNWDEKGDLKGFDFGVFQWHADGSS
2liv SL QAGLN QSDDPAEIAKYLKANSVDTVMGPLTWDEKGDLKGFEFGVFDWHANGTA
2lbp_dssp HHtTTTGGgS---HHHHHHHHHHS-EEETTEEEEE-TTS-EES---EEEEE-TTS-E
2liv_dssp HH HHHHT T-S-HHHHHHHHHHS-EEETTEEE-B-TTS-BSS---EEEEE-TTS-E
Similar 11-11111-111111111111111111111111111111111111111111111111
2lbp TKA
2liv TDA
2lbp_dssp EE-
2liv_dssp EE-
Similar 111
2ohxa.1 STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL 1deha.1 STAGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNL 2ohxa.1_ds --TTS-EEEEEEEB-STTS--EEEEEEE----TTEEEEEEEEEE--HHHHHHHHTSS 1deha.1_ds --TTS-EEEEEEEE-STTS--EEEEEEE----TTEEEEEEEEEE--HHHHHHHHTSS Similar 111111111111111111111111111111111111111111111111111111111 2ohxa.1 VTPLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKN 1deha.1 VTPLPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKN 2ohxa.1_ds ---SSB----EEEEEEEEE-TT--S--TT-EEEE-SS---SSSTTTTSSS----TT- 1deha.1_ds ---SSEE---EEEEEEEEE-TT--S--TT-EEEE-SS---SSSHHHHSTT----TT- Similar 111111111111111111111111111111111111111111111111111111111 2ohxa.1 DLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCL 1deha.1 DLGNPRGTLQDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCL 2ohxa.1_ds SSSS---S-TTS--SEEETTEEEB-STTT--SBSEEEEEGGGEEE--TT--HHHHGG 1deha.1_ds SSSS---S-TTS---EEETTEEEB-STTT--SBSEEEEEGGGEEE--TT--TTTGGG Similar 111111111111111111111111111111111111111111111111111111111 2ohxa.1 IGCKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGESIRTIL 1deha.1 IGCKEGIPKLVADFMAKKFSLDALITHVLPFEKINEGFDLLHSGKSIRTVL 2ohxa.1_ds GGTHHHHHHHHHHHHTTSS--GGGEEEEEEGGGHHHHHHHHHHT--SEEEE 1deha.1_ds GGTHHHHHHHHHHHHTTSS--TTTEEEEEEGGGHHHHHHHHHHT--SEEEE Similar 111111111111111111111111111111111111111111111111111
2ran ALRGTVTDFSGFDGRADAEVLRKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTL
1hvd VLRGTVTDFPGFDGRADAETLRKAMKGLGTDEESILTLLTSRSNAQRQEISAAFKTL
2ran_dssp ----S----TT--HHHHHHHHHHHHSSSS--HHHHHHHHTTS-HHHHHHHHHHHHHH
1hvd_dssp ----S----TT--HHHHHHHHHHHHSSSS--HHHHHHHHHHS-HHHHHHHHHHHHHH
Similar 111111111111111111111111111111111111111111111111111111111
2ran FGRDLVNDMKSELTGKFEKLIVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASR
1hvd FGRDLLDDLKSELTGKFEKLIVALMKPSRLYDAYELKHALKGAGTNEKVLTEIIASR
2ran_dssp HS--HHHHHHHH--HHHHHHHHHHHS-HHHHHHHHHHHHH-SS---HHHHHHHHHHS
1hvd_dssp HS--HHHHHHHH--HHHHHHHHHHHS-HHHHHHHHHHHHHSSSS--HHHHHHHHHHS
Similar 111111111111111111111111111111111111111111111111111111111
2ran TPEELRAIKQAYEEEYGSNLEDDVVGDTSGYYQRMLVVLLQANRDPDTAIDDAQVEL
1hvd TPEELRAIKQVYEEEYGSSLEDDVVGDTSGYYQRMLVVLLQANRDPDAGIDEAQVEQ
2ran_dssp -HHHHHHHHHHHHHHHSS-HHHHHHHH--HHHHHHHHHHHTT---------HHHHHH
1hvd_dssp -HHHHHHHHHHHHHHHSS-HHHHHHHH--HHHHHHHHHHHT-----S----HHHHHH
Similar 111111111111111111111111111111111111111111111111111111111
2ran DAQALFQAGelkwgTDEEKFITILGTRSVSHLRRVFDKYMTISGFQIEETIdretsG
1hvd DAQALFQAGelkwgTDEEKFITIFGTRSVSHLRKVFDKYMTISGFQIEETIdretsG
2ran_dssp HHHHHHHHTttsss--HHHHHHHHHHS-HHHHHHHHHHHHHHHSS-HHHHHhhh--H
1hvd_dssp HHHHHHHHHhttt-S-HHHHHHHHHHS-HHHHHHHHHHHHHHHSS-HHHHH--sss-
Similar 111111111000001111111111111111111111111111111111111000001
2ran NLENLLLAVVKSIRSIPAYLAETLYYAMKGAGTDDHTLIRVIVSRSEIDLFNIRKEF
1hvd NLEQLLLAVVKSIRSIPAYLAETLYYAMKGAGTDDHTLIRVMVSRSEIDLFNIRKEF
2ran_dssp HHHHHHHHHHHHHH-HHHHHHHHHHHHHHSSS--HHHHHHHHHHHTTTTHHHHHHHH
1hvd_dssp HHHHHHHHHHHHHH-HHHHHHHHHHHHHSSSS--HHHHHHHHHHHTTTTHHHHHHHH
Similar 111111111111111111111111111111111111111111111111111111111
2ran RKNFATSLYSMIKGDTSGDYKKALLLLcgg
1hvd RKNFATSLYSMIKGDTSGDYKKALLLL
2ran_dssp HHHHSS-HHHHHHHH--HHHHHHHHHHh--
1hvd_dssp HHHHSS-HHHHHHHH--HHHHHHHHHH
Similar 111111111111111111111111111---
3chy ADKELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGGYGFVISDW
2chf ADKELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGGFGFIISDW
3chy_dssp --TT--EEEE-S-HHHHHHHHHHHHHHT---EEEESSHHHHHHHHHH----EEEEES
2chf_dssp --TT--EEEE-S-HHHHHHHHHHHHHHT---EEEESSHHHHHHHHHT----EEEEES
Similar 111111111111111111111111111111111111111111111111111111111
3chy NMPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAAT
2chf NMPNMDGLELLKTIRADSAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAAT
3chy_dssp --SSS-HHHHHHHHHH-TTTTT--EEEEESS--HHHHHHHHHTT-SEEEESS--HHH
2chf_dssp --SSS-HHHHHHHHHT-TTTTT--EEEEESS--HHHHHHHHHTT-SEEEESS--HHH
Similar 111111111111111111111111111111111111111111111111111111111
3chy LEEKLNKIFEKLG
2chf LEEKLNKIFEKLG
3chy_dssp HHHHHHHHHHHHT
2chf_dssp HHHHHHHHHHHHT
Similar 1111111111111
3cla MNYTKFDVKNWVRREHFEFYRHRLPCGFSLTSKIDITTLKKSLDDSAYKFYPVMIYL
1qca MNYTKFDVKNWVRREHFEFYRHRLPCGFSLTSKIDITTLKKSLDDSAYKFYPVMIYL
3cla_dssp --EEE---TT-TTHHHHHHHHHTS--EEEEEEEEE-HHHHHHHHTSS--HHHHHHHH
1qca_dssp --EEE--GGG-TTHHHHHHHHTTS--EEEEEEEEE-HHHHHHHHTSS--HHHHHHHH
Similar 111111111111111111111111111111111111111111111111111111111
3cla IAQAVNQFDELRMAIKDDELIVWDSVDPQFTVFHQETETFSALSCPYSSDIDQFMVN
1qca IAQAVNQFDELRMAIKDDELIVWDSVDPCFTVFHQETETFSALSCPYSSDIDQFMVN
3cla_dssp HHHHHTT-GGGSEEEETTEEEEES--EEEEEEEETTTTEEEEEE----SSHHHHHHH
1qca_dssp HHHHHHT-GGGSEEEETTEEEEES--EEEEEEEETTTTEEEEEE----SSHHHHHHH
Similar 111111111111111111111111111111111111111111111111111111111
3cla YLSVMERYKSDTKLFPqgvtPENHLNISALPWVNFDSFNLNVANFTDYFAPIITMAK
1qca YLSVMERYKSDTKLFP qgPENHLFISALPWVNFDSFNLNVANFTDFFAPVITMAK
3cla_dssp HHHHHHHHTT--SSSTtss--SSEEEEEEETT---S------S--TT--S-EEEEE-
1qca_dssp HHHHHHHHTT--SSST t----EEEEEEETT---S------S--TT--S-EEEEE-
Similar 1111111111111111--001111111111111111111111111111111111111
3cla YQQEGDRLLLPLSVQVHHAVCDGFHVARFINRLQELCNSKL
1qca YQQEGDRLLLPLSVQVHHAVCDGFHVARFINRLQELCNSKL
3cla_dssp -EEETTEEEEEEEEEEETTT--HHHHHHHHHHHHHHHTS--
1qca_dssp -EEETTEEEEEEEEEEETTT--HHHHHHHHHHHHHHHTS--
Similar 11111111111111111111111111111111111111111
3ebx RICFNHQSSQPQTTKTCSPGESSCYHKQWSDFRGTIIERGCGCPTVKPGIKLSCCES
5ebx RICFNHQSSQPQTTKTCSPGESSCYNKQWSDFRGTIIERGCGCPTVKPGIKLSCCES
3ebx_dssp -EEE---TTS---EEE--TT---EEEEEEEETTEEEEEEEES-----TT-EEEEE-S
5ebx_dssp -EEE---TTS---EEE--TT---EEEEEEE-SS-EEEEEEES-----TT-EEEEE-S
Similar 111111111111111111111111111111111111111111111111111111111
3ebx EVCN
5ebx EVCN
3ebx_dssp TT--
5ebx_dssp TT--
Similar 1111
3grs.1 YNNIPTVVFSHPPIGTVGLTEDEAIHKYGIENVKTYSTSFTPMYHAVTKRKTKCVMK 1gera.1 YSNIPTVVFSHPPIGTVGLTEPQAREQYGDDQVKVYKSSFTAMYTAVTTHRQPCRMK 3grs.1_dss -TT--EEE--SS-EEEEE--HHHHHHHH-GGGEEEEEEEE--GGGGG-SS---EEEE 1gera.1_ds -SS--EEE--SS-EEEEE--HHHHHHHH-TTTEEEEEEEEE-HHHHTSSS--EEEEE Similar 111111111111111111111111111111111111111111111111111111111 3grs.1 MVCANKEEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTVAIHPTSSEELVTL 1gera.1 LVCVGSEEKIVGIHGIGFGMDEMLQGFAVALKMGATKKDFDNTVAIHPTAAEEFVTM 3grs.1_dss EEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTT-BHHHHHTS---SS-SGGGGGS- 1gera.1_ds EEEETTTTEEEEEEEESTTHHHHHHHHHHHHHHT-BHHHHHTS---TT-SGGGGGS- Similar 111111111111111111111111111111111111111111111111111111111
3rubl.1 FQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDE 1ausl.1 FQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDE 3rubl.1_ds ----SS-HHHHHHHHT--SS-EEEEE-SSSS---HHHHHHHHHHHHHTT-SEEE--T 1ausl.1_ds S---SS-HHHHHHHHT--SS-EEEEE-SSSSS--HHHHHHHHHHHHHTT-SEEE--T Similar 111111111111111111111111111111111111111111111111111111111 3rubl.1 NVNSQPFMRWRDRFLFCAEALYKAQAETGEIKGHYLNATAGTCEEMIKRAVFARELG 1ausl.1 NVNSQPFMRWRDRFLFCAEALYKAQAETGEIKGHYLNATAGTCEDMMKRAVFARELG 3rubl.1_ds T-SSBTTB-HHHHHHHHHHHHHHHHHHHSS--EEEEE---SSHHHHHHHHHHHHHHT 1ausl.1_ds T-SSBTTB-HHHHHHHHHHHHHHHHHHHSS--EEEEE---SSHHHHHHHHHHHHHHT Similar 111111111111111111111111111111111111111111111111111111111 3rubl.1 VPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAVIDRQKNHGIHFRVLAKAL 1ausl.1 VPIVMHDYLTGGFTANTTLSHYCRDNGLLLHIHRAMHAVIDRQKNHGMHFRVLAKAL 3rubl.1_ds -SEEEEEHHHH-HHHHHHHHHHHHHHT-EEEEE-TTHHHHHSSTTSEE-HHHHHHHH 1ausl.1_ds -SEEEEEHHHH-HHHHHHHHHHHHHHT-EEEEE-TTHHHHHS-SSSEE-HHHHHHHH Similar 111111111111111111111111111111111111111111111111111111111 3rubl.1 RMSGGDHIHSGTvvgklegeRDITLGFVDLLRDDFVEQDRSRGIYFTQDWVSLPGVL 1ausl.1 RLSGGDHIHSGTv veRDITLGFVDLLRDDYTEKDRSRGIYFTQSWVSTPGVL 3rubl.1_ds HHH--SEEE----tt--hhhHHHHHHHHHHHH-SEE--BGGGTB-S-EE-TT----E 1ausl.1_ds HHH--SEEE---- --HHHHHHHHHHHH-SEE--BGGGTB-S-EE-TT----E Similar 1111111111110-----001111111111111111111111111111111111111 3rubl.1 PVASGGIHVWHMPALTEIFGDDSVLQFGGMTLGHPWGNAPGAVANRVALEACVKARN 1ausl.1 PVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARN 3rubl.1_ds EEEESS--GGGHHHHHHHH-SSSEEEESTTTTTSTT-HHHHHHHHHHHHHHHHHHHH 1ausl.1_ds EEE-SS--GGGHHHHHHHH-SS-EEE-SHHHHT-TT-HHHHHHHHHHHHHHHHHHHH Similar 111111111111111111111111111111111111111111111111111111111 3rubl.1 EGRDLAQEGNEIIREACKWSPELAAACEvwkeiv 1ausl.1 EGRDLAREGNTIIREATKWSPELAAACEvw 3rubl.1_ds TT--HHHHHHHHHHHHHHH-HHHHHHHHhhhhhh 1ausl.1_ds TT--HHHHHHHHHHHHHTT-HHHHHHHHh- Similar 111111111111111111111111111100----
3rubs MQVWPPINKKKYETLSYLPDLSQEQLLSEVEYLLKNGWVPCLEFETEHGFVYRENNK
1auss MQVWPILNLKKYETLSYLPPLTTDQLARQVDYLLNNKWVPCLEFETDHGFVYREHHN
3rubs_dssp -----SSS----STTTTSS---HHHHHHHHHHHHHTT-EEEEEEESS--S-B-SS--
1auss_dssp ------TT----STTTTS----HHHHHHHHHHHHHHT-EEEEEEESS--S-B-SS--
Similar 111111111111111111111111111111111111111111111111111111111
3rubs SPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGFDNVRQVQCIS
1auss SPGYYDGRYWTMWKLPMFGCTDPAQVLNELEECKKEYPNAFIRIIGFDSNREVQCIS
3rubs_dssp STT--BS---EEES---TT---HHHHHHHHHHHHHH-TTSEEEEEEEETTTTEEEEE
1auss_dssp STT--BS---EEES---TT---HHHHHHHHHHHHHH-TTSEEEEEEEETTTTEEEEE
Similar 111111111111111111111111111111111111111111111111111111111
3rubs FIAYKPEG
1auss FIAYKPAG
3rubs_dssp EEEE--TT
1auss_dssp EEEE--TT
Similar 11111111
3sici YAPSALVLTVGKGVSATTAAPERAVTLTCAPGPSGTHPAAGSACADLAAVGGDLNAL
2sici YAPSALVLTVGKGVSATTAAPERAVTLTCAPGPSGTHPAAGSACADLAAVGGDLNAL
3sici_dssp ----EEEEEEEESSSTTSS---EEEEEE-SSS-EEE-TTHHHHHHHHHHHTT-TT--
2sici_dssp ----EEEEEEEESSSTTSS---EEEEEE-SSS-EES-TTHHHHHHHHHHHTT-TT--
Similar 111111111111111111111111111111111111111111111111111111111
3sici TRGEDVMCPKVYDPVLLTVDGVWQGKRVSYERVFSNECEMNAHGSSVFA
2sici TRGEDVMCPMVYDPVLLTVDGVWQGKRVSYERVFSNECEMNAHGSSVFA
3sici_dssp ---SSEEEE-B---EEEEEEEEETTEEEEEEEEESSHHHHHTTSSSSS-
2sici_dssp ---SSEEEE-----EEEEEEEEETTEEEEEEEEESSHHHHHTTSSSTT-
Similar 1111111111111111111111111111111111111111111111111
4cln adqlTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDA
3cln TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDA
4cln_dssp -----HHHHHHHHHHHHHH-TT-SSEE-HHHHHHHHHHTS----HHHHHHHHHHH-S
3cln_dssp -HHHHHHHHHHHHHH-TT-SSEE-HHHHHHHHHHTT----HHHHHHHHHHH-S
Similar ----11111111111111111111111111111111111111111111111111111
4cln DGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGE
3cln DGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE
4cln_dssp S-SS-EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-SSS--HHHHHHHHHHHT-
3cln_dssp S-SSSEEHHHHHHHHHHHHHTTTTHHHHHHHHHHH-TT-SSEE-HHHHHHHHHHTT-
Similar 111111111111111111111111111111111111111111111111111111111
4cln KLTDEEVDEMIREADIDGDGQVNYEEFVTMMTs
3cln KLTDEEVDEMIREANIDGDGQVNYEEFVQMMT
4cln_dssp ---HHHHHHHHHTT-SS-SSS--HHHHHHHTTt
3cln_dssp ---HHHHHHHHHHH-SS-SSSEEHHHHHHHHT
Similar 11111111111111111111111111111111-
4enl.1 AVSKVYARSVYDSRGNPTVEVELTTEKGVFRSIVPSGASTGVHEALEMRDGDKSKWM 1pdz.1 SITKVFARTIFDSRGNPTVEVDLYTSKGLFRAAVPSGASTGVHEALEMRDGDKSKYH 4enl.1_dss ---EEEEEEEE-TTS-EEEEEEEEETTEEEEEE-----SS-SSS--------TTSGG 1pdz.1_dss ---EEEEEEEE-TTS-EEEEEEEEETTEEEEEE----BSS-SSS-B------TTSGG Similar 111111111111111111111111111111111111111111111111111111111 4enl.1 GKGVLHAVKNVNDVIAPAFVKANIDVSDQKAVDDFLISLDGTANKSKLGANAILGVS 1pdz.1 GKSVFNAVKNVNDVIVPEIIKSGLKVTQQKECDEFMCKLDGTENKSSLGANAILGVS 4enl.1_dss GT--HHHHHHHHHTHHHHHHHHT--TT-HHHHHHHHHHHH-STT-TTT-HHHHHHHH 1pdz.1_dss GT--HHHHHHHHHTHHHHHHHHT--TT-HHHHHHHHHHHH-SSSSTTT-HHHHHHHH Similar 111111111111111111111111111111111111111111111111111111111 4enl.1 LAASRAAAAEKNVPLYKHLADLSKsk 1pdz.1 LAICKAGAAELGIPLYRHIANLAN 4enl.1_dss HHHHHHHHHHHTS-HHHHHHHHHT-- 1pdz.1_dss HHHHHHHHHHTTS-HHHHHHHHTT Similar 111111111111111111111111--
4fxc aTYKVTLIneaEGINETIDCDDDTYILDAAEEAGLDLPYSCRAGACSTCAGTITS G
1fxia aSYKVTLK tPDGDNVITVPDDEYILDVAEEEGLDLPYSCRAGACSTCAGKLVSgP
4fxc_dssp ---EEEEE-stTS-EEEEE--TTS-HHHHHHHTT-----SSSSSS-SSSBEEEEE E
1fxia_dssp --EEEEEE eTTEEEEEEE-TTS-HHHHHHHHT-----SSSSSSSSTTEEEEEEsS
Similar 01111111--011111111111111111111111111111111111111111111-1
4fxc TIDQSDQSFLDddQIEAGYVLTCVAYPTSDCTIKTHQEEGL
1fxia APDEDQSFLDD dQIQAGYILTCVAYPTGDCVIETHKEEAL
4fxc_dssp EEE--S-SS--hhHHHTTEE-GGG-EEEEEEEEESBTTTT-
1fxia_dssp --B-SSS-SST t-TTTTEEEGGG-B--SSEEEE---TTT-
Similar 11111111111-01111111111111111111111111111
4gcr.1 GKITFYEDRGFQGHCYECSSDCPNLQPYFSRCNSIRVDSGCWMLYERPNYQGHQYFL 2gcr.1 GKITFYEDRGFQGRHYECSSDHSNLQPYFSRCNSIRVDSGCWMLYEQPNFTGCQYFL 4gcr.1_dss -EEEEEEEGGGEEEEEEESS-BS--TTT-S--SEEEEEES-EEEEEETTTEEEEEEE 2gcr.1_dss --EEEESSGGG-SSEEEESS-BS--TTT-S--SEEEE-SSEEEEESSTTS-S-EEEE Similar 111111111111111111111111111111111111111111111111111111111 4gcr.1 RRGDYPDYQQWMGFNDSIRSCRLIPQh 2gcr.1 RRGDYPDYQQWMGFSDSVRSCRLIPH 4gcr.1_dss -SEEE-SGGGGT-SSS---EEEE---- 2gcr.1_dss -SEEESSSGGGT-SSS---EEEEE-- Similar 11111111111111111111111111-