Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	R	T	V	K	V	F	E	E	A	W	P	L	H	T	P	F	V	I	A	R	G	S	R	S	E	A	R	V	V	V	V	E	L	E	E	E	G	I	K	G	T	G	E	C	T	P	Y	P	R	Y	G	E	S	D	A	S	V	M	A
Secondary structure
SS confidence
Disorder		?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		Q	I	M	S	V	V	P	Q	L	E	K	G	L	T	R	E	E	L	Q	K	I	L	P	A	G	A	A	R	N	A	L	D	C	A	L	W	D	L	A	A	R	R	Q	Q	Q	S	L	A	D	L	I	G	I	T	L	P	E	T	V	I
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Sequence		T	A	Q	T	V	V	I	G	T	P	D	Q	M	A	N	S	A	S	T	L	W	Q	A	G	A	K	L	L	K	V	K	L	D	N	H	L	I	S	E	R	M	V	A	I	R	T	A	V	P	D	A	T	L	I	V	D	A	N	E	S
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Sequence		W	R	A	E	G	L	A	A	R	C	Q	L	L	A	D	L	G	V	A	M	L	E	Q	P	L	P	A	Q	D	D	A	A	L	E	N	F	I	H	P	L	P	I	C	A	D	E	S	C	H	T	R	S	N	L	K	A	L	K	G	R
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Sequence		Y	E	M	V	N	I	K	L	D	K	T	G	G	L	T	E	A	L	A	L	A	T	E	A	R	A	Q	G	F	S	L	M	L	G	C	M	L	C	T	S	R	A	I	S	A	A	L	P	L	V	P	Q	V	S	F	A	D	L	D	G
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Sequence		P	T	W	L	A	V	D	V	E	P	A	L	Q	F	T	T	G	E	L	H	L
Secondary structure
SS confidence
Disorder																	?	?				?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 1jpd chain X Region: 1 - 321 Aligned: 315 Modelled: 321 Confidence: 100.0% Identity: 100% PDB header:isomerase Chain: X: PDB Molecule:l-ala-d/l-glu epimerase; PDBTitle: l-ala-d/l-glu epimerase Phyre2 PDB 3q45 chain E Region: 1 - 321 Aligned: 321 Modelled: 321 Confidence: 100.0% Identity: 26% PDB header:isomerase Chain: E: PDB Molecule:mandelate racemase/muconate lactonizing enzyme family; PDBTitle: crystal structure of dipeptide epimerase from cytophaga hutchinsonii2 complexed with mg and dipeptide d-ala-l-val Phyre2 PDB 2chr chain A Region: 1 - 321 Aligned: 321 Modelled: 321 Confidence: 100.0% Identity: 26% PDB header:isomerase Chain: A: PDB Molecule:chloromuconate cycloisomerase; PDBTitle: a re-evaluation of the crystal structure of chloromuconate2 cycloisomerase Phyre2 PDB 1nu5 chain A Region: 1 - 321 Aligned: 321 Modelled: 321 Confidence: 100.0% Identity: 27% PDB header:isomerase Chain: A: PDB Molecule:chloromuconate cycloisomerase; PDBTitle: crystal structure of pseudomonas sp. p51 chloromuconate lactonizing2 enzyme Phyre2 PDB 2zc8 chain B Region: 1 - 321 Aligned: 320 Modelled: 321 Confidence: 100.0% Identity: 24% PDB header:metal binding protein Chain: B: PDB Molecule:n-acylamino acid racemase; PDBTitle: crystal structure of n-acylamino acid racemase from thermus2 thermophilus hb8 Phyre2 PDB 2pge chain A Region: 9 - 321 Aligned: 312 Modelled: 313 Confidence: 100.0% Identity: 19% PDB header:lyase Chain: A: PDB Molecule:menc; PDBTitle: crystal structure of menc from desulfotalea psychrophila2 lsv54 Phyre2 PDB 3px5 chain A Region: 1 - 321 Aligned: 320 Modelled: 321 Confidence: 100.0% Identity: 24% PDB header:metal binding protein Chain: A: PDB Molecule:enzyme of enolase superfamily; PDBTitle: structure of efi enolase target en500555, a putative dipeptide2 epimerase: apo structure Phyre2 PDB 1jpm chain B Region: 1 - 321 Aligned: 320 Modelled: 320 Confidence: 100.0% Identity: 29% PDB header:isomerase Chain: B: PDB Molecule:l-ala-d/l-glu epimerase; PDBTitle: l-ala-d/l-glu epimerase Phyre2 PDB 1wue chain A Region: 1 - 321 Aligned: 320 Modelled: 321 Confidence: 100.0% Identity: 24% PDB header:structural genomics, unknown function Chain: A: PDB Molecule:mandelate racemase/muconate lactonizing enzyme family PDBTitle: crystal structure of protein gi:29375081, unknown member of enolase2 superfamily from enterococcus faecalis v583 Phyre2 PDB 3rit chain E Region: 1 - 321 Aligned: 320 Modelled: 321 Confidence: 100.0% Identity: 33% PDB header:isomerase Chain: E: PDB Molecule:dipeptide epimerase; PDBTitle: crystal structure of dipeptide epimerase from methylococcus capsulatus2 complexed with mg and dipeptide l-arg-d-lys Phyre2 PDB 3ijl chain A Region: 3 - 321 Aligned: 315 Modelled: 319 Confidence: 100.0% Identity: 34% PDB header:isomerase Chain: A: PDB Molecule:muconate cycloisomerase; PDBTitle: structure of dipeptide epimerase from bacteroides thetaiotaomicron2 complexed with l-pro-d-glu; nonproductive substrate binding. Phyre2 PDB 2p88 chain E Region: 1 - 321 Aligned: 320 Modelled: 321 Confidence: 100.0% Identity: 28% PDB header:lyase Chain: E: PDB Molecule:mandelate racemase/muconate lactonizing enzyme PDBTitle: crystal structure of n-succinyl arg/lys racemase from2 bacillus cereus atcc 14579 Phyre2 PDB 2qdd chain A Region: 1 - 321 Aligned: 319 Modelled: 321 Confidence: 100.0% Identity: 24% PDB header:structural genomics, unknown function Chain: A: PDB Molecule:mandelate racemase/muconate lactonizing enzyme; PDBTitle: crystal structure of a member of enolase superfamily from roseovarius2 nubinhibens ism Phyre2 PDB 2pgw chain C Region: 1 - 321 Aligned: 316 Modelled: 321 Confidence: 100.0% Identity: 23% PDB header:isomerase Chain: C: PDB Molecule:muconate cycloisomerase; PDBTitle: crystal structure of a putative muconate cycloisomerase from2 sinorhizobium meliloti 1021 Phyre2 PDB 1sja chain A Region: 1 - 321 Aligned: 320 Modelled: 321 Confidence: 100.0% Identity: 23% PDB header:lyase, isomerase Chain: A: PDB Molecule:n-acylamino acid racemase; PDBTitle: x-ray structure of o-succinylbenzoate synthase complexed2 with n-acetylmethionine Phyre2 PDB 3fv9 chain D Region: 1 - 321 Aligned: 321 Modelled: 321 Confidence: 100.0% Identity: 23% PDB header:hydrolase Chain: D: PDB Molecule:mandelate racemase/muconate lactonizing enzyme; PDBTitle: crystal structure of putative mandelate racemase/muconatelactonizing2 enzyme from roseovarius nubinhibens ism complexed with magnesium Phyre2 PDB 2nql chain B Region: 1 - 321 Aligned: 316 Modelled: 321 Confidence: 100.0% Identity: 20% PDB header:structural genomics, unknown function Chain: B: PDB Molecule:isomerase/lactonizing enzyme; PDBTitle: crystal structure of a member of the enolase superfamily from2 agrobacterium tumefaciens Phyre2 PDB 1wuf chain B Region: 1 - 321 Aligned: 320 Modelled: 321 Confidence: 100.0% Identity: 24% PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical protein lin2664; PDBTitle: crystal structure of protein gi:16801725, member of enolase2 superfamily from listeria innocua clip11262 Phyre2 PDB 3i4k chain A Region: 1 - 321 Aligned: 321 Modelled: 321 Confidence: 100.0% Identity: 25% PDB header:isomerase Chain: A: PDB Molecule:muconate lactonizing enzyme; PDBTitle: crystal structure of muconate lactonizing enzyme from2 corynebacterium glutamicum Phyre2 PDB 3dg7 chain B Region: 1 - 321 Aligned: 320 Modelled: 321 Confidence: 100.0% Identity: 23% PDB header:isomerase Chain: B: PDB Molecule:muconate cycloisomerase; PDBTitle: crystal structure of muconate lactonizing enzyme from mucobacterium2 smegmatis complexed with muconolactone Phyre2 1 c1jpdX_ 2 c3q45E_ 3 c2chrA_ 4 c1nu5A_ 5 c2zc8B_ 6 c2pgeA_ 7 c3px5A_ 8 c1jpmB_ 9 c1wueA_ 10 c3ritE_ 11 c3ijlA_ 12 c2p88E_ 13 c2qddA_ 14 c2pgwC_ 15 c1sjaA_ 16 c3fv9D_ 17 c2nqlB_ 18 c1wufB_ 19 c3i4kA_ 20 c3dg7B_ 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c1jpdX_ 100.0 100 PDB header:isomerase Chain: X: PDB Molecule:l-ala-d/l-glu epimerase; PDBTitle: l-ala-d/l-glu epimerase 2 c3q45E_ 100.0 26 PDB header:isomerase Chain: E: PDB Molecule:mandelate racemase/muconate lactonizing enzyme family; PDBTitle: crystal structure of dipeptide epimerase from cytophaga hutchinsonii2 complexed with mg and dipeptide d-ala-l-val 3 c2chrA_ 100.0 26 PDB header:isomerase Chain: A: PDB Molecule:chloromuconate cycloisomerase; PDBTitle: a re-evaluation of the crystal structure of chloromuconate2 cycloisomerase 4 c1nu5A_ 100.0 27 PDB header:isomerase Chain: A: PDB Molecule:chloromuconate cycloisomerase; PDBTitle: crystal structure of pseudomonas sp. p51 chloromuconate lactonizing2 enzyme 5 c2zc8B_ 100.0 24 PDB header:metal binding protein Chain: B: PDB Molecule:n-acylamino acid racemase; PDBTitle: crystal structure of n-acylamino acid racemase from thermus2 thermophilus hb8 6 c2pgeA_ 100.0 19 PDB header:lyase Chain: A: PDB Molecule:menc; PDBTitle: crystal structure of menc from desulfotalea psychrophila2 lsv54 7 c3px5A_ 100.0 24 PDB header:metal binding protein Chain: A: PDB Molecule:enzyme of enolase superfamily; PDBTitle: structure of efi enolase target en500555, a putative dipeptide2 epimerase: apo structure 8 c1jpmB_ 100.0 29 PDB header:isomerase Chain: B: PDB Molecule:l-ala-d/l-glu epimerase; PDBTitle: l-ala-d/l-glu epimerase 9 c1wueA_ 100.0 24 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:mandelate racemase/muconate lactonizing enzyme family PDBTitle: crystal structure of protein gi:29375081, unknown member of enolase2 superfamily from enterococcus faecalis v583 10 c3ritE_ 100.0 33 PDB header:isomerase Chain: E: PDB Molecule:dipeptide epimerase; PDBTitle: crystal structure of dipeptide epimerase from methylococcus capsulatus2 complexed with mg and dipeptide l-arg-d-lys 11 c3ijlA_ 100.0 34 PDB header:isomerase Chain: A: PDB Molecule:muconate cycloisomerase; PDBTitle: structure of dipeptide epimerase from bacteroides thetaiotaomicron2 complexed with l-pro-d-glu; nonproductive substrate binding. 12 c2p88E_ 100.0 28 PDB header:lyase Chain: E: PDB Molecule:mandelate racemase/muconate lactonizing enzyme PDBTitle: crystal structure of n-succinyl arg/lys racemase from2 bacillus cereus atcc 14579 13 c2qddA_ 100.0 24 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:mandelate racemase/muconate lactonizing enzyme; PDBTitle: crystal structure of a member of enolase superfamily from roseovarius2 nubinhibens ism 14 c2pgwC_ 100.0 23 PDB header:isomerase Chain: C: PDB Molecule:muconate cycloisomerase; PDBTitle: crystal structure of a putative muconate cycloisomerase from2 sinorhizobium meliloti 1021 15 c1sjaA_ 100.0 23 PDB header:lyase, isomerase Chain: A: PDB Molecule:n-acylamino acid racemase; PDBTitle: x-ray structure of o-succinylbenzoate synthase complexed2 with n-acetylmethionine 16 c3fv9D_ 100.0 23 PDB header:hydrolase Chain: D: PDB Molecule:mandelate racemase/muconate lactonizing enzyme; PDBTitle: crystal structure of putative mandelate racemase/muconatelactonizing2 enzyme from roseovarius nubinhibens ism complexed with magnesium 17 c2nqlB_ 100.0 20 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:isomerase/lactonizing enzyme; PDBTitle: crystal structure of a member of the enolase superfamily from2 agrobacterium tumefaciens 18 c1wufB_ 100.0 24 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical protein lin2664; PDBTitle: crystal structure of protein gi:16801725, member of enolase2 superfamily from listeria innocua clip11262 19 c3i4kA_ 100.0 25 PDB header:isomerase Chain: A: PDB Molecule:muconate lactonizing enzyme; PDBTitle: crystal structure of muconate lactonizing enzyme from2 corynebacterium glutamicum 20 c3dg7B_ 100.0 23 PDB header:isomerase Chain: B: PDB Molecule:muconate cycloisomerase; PDBTitle: crystal structure of muconate lactonizing enzyme from mucobacterium2 smegmatis complexed with muconolactone 21 c2pmqA_ not modelled 100.0 21 PDB header:isomerase Chain: A: PDB Molecule:mandelate racemase/muconate lactonizing enzyme; PDBTitle: crystal structure of a mandelate racemase/muconate lactonizing enzyme2 from roseovarius sp. htcc2601 22 c2ps2A_ not modelled 100.0 22 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative mandelate racemase/muconate lactonizing PDBTitle: crystal structure of putative mandelate racemase/muconate2 lactonizing enzyme from aspergillus oryzae 23 c3jw7E_ not modelled 100.0 33 PDB header:isomerase Chain: E: PDB Molecule:dipeptide epimerase; PDBTitle: crystal structure of dipeptide epimerase from enterococcus faecalis2 v583 complexed with mg and dipeptide l-ile-l-tyr 24 c3i6eA_ not modelled 100.0 25 PDB header:isomerase Chain: A: PDB Molecule:muconate cycloisomerase i; PDBTitle: crystal structure of muconate lactonizing enzyme from2 ruegeria pomeroyi. 25 c3mwcA_ not modelled 100.0 24 PDB header:ligase Chain: A: PDB Molecule:mandelate racemase/muconate lactonizing protein; PDBTitle: crystal structure of probable o-succinylbenzoic acid synthetase from2 kosmotoga olearia 26 c3ik4A_ not modelled 100.0 30 PDB header:isomerase Chain: A: PDB Molecule:mandelate racemase/muconate lactonizing protein; PDBTitle: crystal structure of mandelate racemase/muconate lactonizing protein2 from herpetosiphon aurantiacus 27 c3qldB_ not modelled 100.0 23 PDB header:isomerase Chain: B: PDB Molecule:mandelate racemase/muconate lactonizing protein; PDBTitle: structure of probable mandelate racemase (aalaa1draft_2112) from2 alicyclobacillus acidocaldarius 28 c2qdeA_ not modelled 100.0 26 PDB header:lyase Chain: A: PDB Molecule:mandelate racemase/muconate lactonizing enzyme family PDBTitle: crystal structure of mandelate racemase/muconate lactonizing family2 protein from azoarcus sp. ebn1 29 c2fkpC_ not modelled 100.0 22 PDB header:isomerase Chain: C: PDB Molecule:n-acylamino acid racemase; PDBTitle: the mutant g127c-t313c of deinococcus radiodurans n-2 acylamino acid racemase 30 c2pp1C_ not modelled 100.0 23 PDB header:lyase Chain: C: PDB Molecule:l-talarate/galactarate dehydratase; PDBTitle: crystal structure of l-talarate/galactarate dehydratase from2 salmonella typhimurium lt2 liganded with mg and l-lyxarohydroxamate 31 c1f9cA_ not modelled 100.0 24 PDB header:isomerase Chain: A: PDB Molecule:protein (muconate cycloisomerase i); PDBTitle: crystal structure of mle d178n variant 32 c2rdxG_ not modelled 100.0 18 PDB header:structural genomics, unknown function Chain: G: PDB Molecule:mandelate racemase/muconate lactonizing enzyme, putative; PDBTitle: crystal structure of mandelate racemase/muconate lactonizing enzyme2 from roseovarius nubinhibens ism 33 c3bjsB_ not modelled 100.0 22 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:mandelate racemase/muconate lactonizing enzyme; PDBTitle: crystal structure of a member of enolase superfamily from polaromonas2 sp. js666 34 c3es8D_ not modelled 100.0 21 PDB header:isomerase, lyase Chain: D: PDB Molecule:muconate cycloisomerase; PDBTitle: crystal structure of divergent enolase from oceanobacillus2 iheyensis complexed with mg and l-malate. 35 c2gdqB_ not modelled 100.0 19 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:yitf; PDBTitle: crystal structure of mandelate racemase/muconate lactonizing enzyme2 from bacillus subtilis at 1.8 a resolution 36 c1mraA_ not modelled 100.0 20 PDB header:racemase Chain: A: PDB Molecule:mandelate racemase; PDBTitle: mandelate racemase mutant d270n co-crystallized with (s)-atrolactate 37 c3h12B_ not modelled 100.0 23 PDB header:isomerase Chain: B: PDB Molecule:mandelate racemase; PDBTitle: crystal structure of putative mandelate racemase from bordetella2 bronchiseptica rb50 38 c1rvkA_ not modelled 100.0 21 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:isomerase/lactonizing enzyme; PDBTitle: crystal structure of enolase agr_l_2751 from agrobacterium tumefaciens 39 c3eezA_ not modelled 100.0 25 PDB header:isomerase Chain: A: PDB Molecule:putative mandelate racemase/muconate lactonizing PDBTitle: crystal structure of a putative mandelate racemase/muconate2 lactonizing enzyme from silicibacter pomeroyi 40 c3my9A_ not modelled 100.0 22 PDB header:isomerase Chain: A: PDB Molecule:muconate cycloisomerase; PDBTitle: crystal structure of a muconate cycloisomerase from azorhizobium2 caulinodans 41 c3toyC_ not modelled 100.0 19 PDB header:lyase Chain: C: PDB Molecule:mandelate racemase/muconate lactonizing enzyme family PDBTitle: crystal structure of enolase brado_4202 (target efi-501651) from2 bradyrhizobium sp. ors278 with calcium and acetate bound 42 c2oz8B_ not modelled 100.0 19 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:mll7089 protein; PDBTitle: crystal structure of putative mandelate racemase from mesorhizobium2 loti 43 c2hxtA_ not modelled 100.0 21 PDB header:unknown function Chain: A: PDB Molecule:l-fuconate dehydratase; PDBTitle: crystal structure of l-fuconate dehydratase from xanthomonas2 campestris liganded with mg++ and d-erythronohydroxamate 44 c2ovlA_ not modelled 100.0 23 PDB header:isomerase Chain: A: PDB Molecule:putative racemase; PDBTitle: crystal structure of a racemase from streptomyces2 coelicolor a3(2) 45 c3fcpF_ not modelled 100.0 29 PDB header:isomerase Chain: F: PDB Molecule:l-ala-d/l-glu epimerase, a muconate lactonizing PDBTitle: crystal structure of muconate lactonizing enzyme from2 klebsiella pneumoniae 46 c3dfyJ_ not modelled 100.0 27 PDB header:isomerase Chain: J: PDB Molecule:muconate cycloisomerase; PDBTitle: crystal structure of apo dipeptide epimerase from2 thermotoga maritima 47 c2qgyA_ not modelled 100.0 15 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:enolase from the environmental genome shotgun PDBTitle: crystal structure of an enolase from the environmental2 genome shotgun sequencing of the sargasso sea 48 c2ppgB_ not modelled 100.0 17 PDB header:isomerase Chain: B: PDB Molecule:putative isomerase; PDBTitle: crystal structure of putative isomerase from sinorhizobium meliloti 49 c2oqhD_ not modelled 100.0 23 PDB header:isomerase Chain: D: PDB Molecule:putative isomerase; PDBTitle: crystal structure of an isomerase from streptomyces coelicolor a3(2) 50 c3cyjA_ not modelled 100.0 21 PDB header:isomerase Chain: A: PDB Molecule:mandelate racemase/muconate lactonizing enzyme-like PDBTitle: crystal structure of a mandelate racemase/muconate lactonizing enzyme-2 like protein from rubrobacter xylanophilus 51 c3ugvE_ not modelled 100.0 18 PDB header:lyase Chain: E: PDB Molecule:enolase; PDBTitle: crystal structure of an enolase from alpha pretobacterium bal199 (efi2 target efi-501650) with bound mg 52 c2gl5A_ not modelled 100.0 21 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative dehydratase protein; PDBTitle: crystal structure of putative dehydratase from salmonella thyphimurium 53 c3tjiA_ not modelled 100.0 21 PDB header:lyase Chain: A: PDB Molecule:mandelate racemase/muconate lactonizing enzyme, n-terminal PDBTitle: crystal structure of an enolase from enterobacter sp. 638 (efi target2 efi-501662) with bound mg 54 c3sjnB_ not modelled 100.0 20 PDB header:lyase Chain: B: PDB Molecule:mandelate racemase/muconate lactonizing protein; PDBTitle: crystal structure of enolase spea_3858 (target efi-500646) from2 shewanella pealeana with magnesium bound 55 c3msyC_ not modelled 100.0 20 PDB header:isomerase Chain: C: PDB Molecule:mandelate racemase/muconate lactonizing enzyme; PDBTitle: crystal structure of mandelate racemase/muconate lactonizing enzyme2 from a marine actinobacterium 56 c3rcyC_ not modelled 100.0 20 PDB header:isomerase Chain: C: PDB Molecule:mandelate racemase/muconate lactonizing enzyme-like PDBTitle: crystal structure of mandelate racemase/muconate lactonizing enzyme-2 like protein from roseovarius sp. tm1035 57 c2oktA_ not modelled 100.0 17 PDB header:lyase Chain: A: PDB Molecule:o-succinylbenzoic acid synthetase; PDBTitle: crystal structure of o-succinylbenzoic acid synthetase from2 staphylococcus aureus, ligand-free form 58 c3bsmD_ not modelled 100.0 19 PDB header:lyase Chain: D: PDB Molecule:mandelate racemase/muconate lactonizing enzyme; PDBTitle: crystal structure of d-mannonate dehydratase from2 chromohalobacter salexigens 59 c2hzgB_ not modelled 100.0 23 PDB header:isomerase Chain: B: PDB Molecule:mandelate racemase/muconate lactonizing enzyme/enolase PDBTitle: crystal stucture of predicted mandelate racemase from rhodobacter2 sphaeroides 60 c3rr1B_ not modelled 100.0 20 PDB header:lyase Chain: B: PDB Molecule:putative d-galactonate dehydratase; PDBTitle: crystal structure of enolase prk14017 (target efi-500653) from2 ralstonia pickettii 12j 61 c2ox4E_ not modelled 100.0 20 PDB header:isomerase Chain: E: PDB Molecule:putative mandelate racemase; PDBTitle: crystal structure of putative dehydratase from zymomonas mobilis zm4 62 c3cb3B_ not modelled 100.0 25 PDB header:isomerase Chain: B: PDB Molecule:mandelate racemase/muconate lactonizing enzyme; PDBTitle: crystal structure of l-talarate dehydratase from polaromonas sp. js6662 complexed with mg and l-glucarate 63 c2o56D_ not modelled 100.0 23 PDB header:structural genomics, unknown function Chain: D: PDB Molecule:putative mandelate racemase; PDBTitle: crystal structure of a member of the enolase superfamily from2 salmonella typhimurium 64 c3dfhC_ not modelled 100.0 16 PDB header:isomerase Chain: C: PDB Molecule:mandelate racemase; PDBTitle: crystal structure of putative mandelate racemase / muconate2 lactonizing enzyme from vibrionales bacterium swat-3 65 c2qjjC_ not modelled 100.0 21 PDB header:lyase Chain: C: PDB Molecule:mandelate racemase/muconate lactonizing enzyme; PDBTitle: crystal structure of d-mannonate dehydratase from novosphingobium2 aromaticivorans 66 c3tj4B_ not modelled 100.0 23 PDB header:lyase Chain: B: PDB Molecule:mandelate racemase; PDBTitle: crystal structure of an enolase from agrobacterium tumefaciens (efi2 target efi-502087) no mg 67 c3sqsA_ not modelled 100.0 19 PDB header:isomerase Chain: A: PDB Molecule:mandelate racemase/muconate lactonizing protein; PDBTitle: crystal structure of a putative mandelate racemase/muconate2 lactonizing protein from dinoroseobacter shibae dfl 12 68 c3thuC_ not modelled 100.0 21 PDB header:lyase Chain: C: PDB Molecule:mandelate racemase / muconate lactonizing enzyme family PDBTitle: crystal structure of an enolase from sphingomonas sp. ska58 (efi2 target efi-501683) with bound mg 69 c3t6cB_ not modelled 100.0 20 PDB header:lyase Chain: B: PDB Molecule:putative mand family dehydratase; PDBTitle: crystal structure of an enolase from pantoea ananatis (efi target efi-2 501676) with bound d-gluconate and mg 70 c2pozA_ not modelled 100.0 23 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative dehydratase; PDBTitle: crystal structure of a putative dehydratase from mesorhizobium loti 71 c3n4eA_ not modelled 100.0 22 PDB header:isomerase Chain: A: PDB Molecule:mandelate racemase/muconate lactonizing enzyme, c-terminal PDBTitle: crystal structure of mandelate racemase/muconate lactonizing protein2 from paracoccus denitrificans pd1222 72 c3mqtV_ not modelled 100.0 19 PDB header:isomerase Chain: V: PDB Molecule: PDBTitle: crystal structure of a mandelate racemase/muconate lactonizing enzyme2 from shewanella pealeana 73 c2dw7G_ not modelled 100.0 17 PDB header:lyase Chain: G: PDB Molecule:bll6730 protein; PDBTitle: crystal structure of d-tartrate dehydratase from2 bradyrhizobium japonicum complexed with mg++ and meso-3 tartrate 74 c1ec8B_ not modelled 100.0 15 PDB header:lyase Chain: B: PDB Molecule:glucarate dehydratase; PDBTitle: e. coli glucarate dehydratase bound to product 2,3-2 dihydroxy-5-oxo-hexanedioate 75 c3ddmD_ not modelled 100.0 23 PDB header:lyase Chain: D: PDB Molecule:putative mandelate racemase/muconate lactonizing PDBTitle: crystal structure of mandelate racemase/muconate2 lactonizing enzyme from bordetella bronchiseptica rb50 76 c3mznA_ not modelled 100.0 19 PDB header:lyase Chain: A: PDB Molecule:glucarate dehydratase; PDBTitle: crystal structure of probable glucarate dehydratase from2 chromohalobacter salexigens dsm 3043 77 c2oo6A_ not modelled 100.0 20 PDB header:isomerase Chain: A: PDB Molecule:putative l-alanine-dl-glutamate epimerase; PDBTitle: crystal structure of putative l-alanine-dl-glutamate epimerase from2 burkholderia xenovorans strain lb400 78 c3gc2A_ not modelled 100.0 20 PDB header:lyase Chain: A: PDB Molecule:o-succinylbenzoate synthase; PDBTitle: 1.85 angstrom crystal structure of o-succinylbenzoate synthase from2 salmonella typhimurium in complex with succinic acid 79 c3t8qA_ not modelled 100.0 22 PDB header:isomerase Chain: A: PDB Molecule:mandelate racemase/muconate lactonizing enzyme family PDBTitle: crystal structure of mandelate racemase/muconate lactonizing enzyme2 family protein from hoeflea phototrophica 80 c3mkcA_ not modelled 100.0 21 PDB header:isomerase Chain: A: PDB Molecule:racemase; PDBTitle: crystal structure of a putative racemase 81 c2podA_ not modelled 100.0 22 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:mandelate racemase / muconate lactonizing enzyme; PDBTitle: crystal structure of a member of enolase superfamily from burkholderia2 pseudomallei k96243 82 c2qq6B_ not modelled 100.0 25 PDB header:isomerase Chain: B: PDB Molecule:mandelate racemase/muconate lactonizing enzyme- PDBTitle: crystal structure of mandelate racemase/muconate2 lactonizing enzyme-like protein from rubrobacter3 xylanophilus dsm 9941 83 c2p0iA_ not modelled 100.0 19 PDB header:lyase Chain: A: PDB Molecule:l-rhamnonate dehydratase; PDBTitle: crystal structure of l-rhamnonate dehydratase from gibberella zeae 84 c3dipA_ not modelled 100.0 26 PDB header:lyase Chain: A: PDB Molecule:enolase; PDBTitle: crystal structure of an enolase protein from the2 environmental genome shotgun sequencing of the sargasso sea 85 c3n6jA_ not modelled 100.0 18 PDB header:isomerase Chain: A: PDB Molecule:mandelate racemase/muconate lactonizing protein; PDBTitle: crystal structure of mandelate racemase/muconate lactonizing protein2 from actinobacillus succinogenes 130z 86 c2oztA_ not modelled 100.0 22 PDB header:lyase Chain: A: PDB Molecule:tlr1174 protein; PDBTitle: crystal structure of o-succinylbenzoate synthase from2 thermosynechococcus elongatus bp-1 87 c3t9pB_ not modelled 100.0 16 PDB header:isomerase Chain: B: PDB Molecule:mandelate racemase/muconate lactonizing enzyme family PDBTitle: crystal structure of a putative mandelate racemase/muconate2 lactonizing enzyme family protein from roseovarius 88 c2oz3F_ not modelled 100.0 19 PDB header:lyase Chain: F: PDB Molecule:mandelate racemase/muconate lactonizing enzyme; PDBTitle: crystal structure of l-rhamnonate dehydratase from azotobacter2 vinelandii 89 c3nxlD_ not modelled 100.0 15 PDB header:lyase Chain: D: PDB Molecule:glucarate dehydratase; PDBTitle: crystal structure of glucarate dehydratase from burkholderia cepacia2 complexed with magnesium 90 c3n4fD_ not modelled 100.0 18 PDB header:isomerase Chain: D: PDB Molecule:mandelate racemase/muconate lactonizing protein; PDBTitle: crystal structure of mandelate racemase/muconate lactonizing protein2 from geobacillus sp. y412mc10 91 c3cxoA_ not modelled 100.0 17 PDB header:lyase Chain: A: PDB Molecule:putative galactonate dehydratase; PDBTitle: crystal structure of l-rhamnonate dehydratase from2 salmonella typhimurium complexed with mg and 3-deoxy-l-3 rhamnonate 92 c1kczA_ not modelled 100.0 15 PDB header:lyase Chain: A: PDB Molecule:beta-methylaspartase; PDBTitle: crystal structure of beta-methylaspartase from clostridium2 tetanomorphum. mg-complex. 93 c2qvhB_ not modelled 100.0 25 PDB header:lyase Chain: B: PDB Molecule:o-succinylbenzoate-coa synthase; PDBTitle: crystal structure of o-succinylbenzoate synthase complexed with o-2 succinyl benzoate (osb) 94 c1kkoB_ not modelled 100.0 19 PDB header:lyase Chain: B: PDB Molecule:3-methylaspartate ammonia-lyase; PDBTitle: crystal structure of citrobacter amalonaticus2 methylaspartate ammonia lyase 95 d1jpdx1 not modelled 100.0 100 Fold:TIM beta/alpha-barrel Superfamily:Enolase C-terminal domain-like Family:D-glucarate dehydratase-like 96 c3cawB_ not modelled 100.0 14 PDB header:oxidoreductase Chain: B: PDB Molecule:o-succinylbenzoate synthase; PDBTitle: crystal structure of o-succinylbenzoate synthase from2 bdellovibrio bacteriovorus liganded with mg 97 d1sjda1 not modelled 100.0 25 Fold:TIM beta/alpha-barrel Superfamily:Enolase C-terminal domain-like Family:D-glucarate dehydratase-like 98 d1jpma1 not modelled 100.0 31 Fold:TIM beta/alpha-barrel Superfamily:Enolase C-terminal domain-like Family:D-glucarate dehydratase-like 99 d1muca1 not modelled 100.0 25 Fold:TIM beta/alpha-barrel Superfamily:Enolase C-terminal domain-like Family:D-glucarate dehydratase-like 100 d1wuea1 not modelled 100.0 22 Fold:TIM beta/alpha-barrel Superfamily:Enolase C-terminal domain-like Family:D-glucarate dehydratase-like 101 d2chra1 not modelled 100.0 27 Fold:TIM beta/alpha-barrel Superfamily:Enolase C-terminal domain-like Family:D-glucarate dehydratase-like 102 d1wufa1 not modelled 100.0 20 Fold:TIM beta/alpha-barrel Superfamily:Enolase C-terminal domain-like Family:D-glucarate dehydratase-like 103 d1r0ma1 not modelled 100.0 21 Fold:TIM beta/alpha-barrel Superfamily:Enolase C-terminal domain-like Family:D-glucarate dehydratase-like 104 d1nu5a1 not modelled 100.0 27 Fold:TIM beta/alpha-barrel Superfamily:Enolase C-terminal domain-like Family:D-glucarate dehydratase-like 105 d2gl5a1 not modelled 100.0 20 Fold:TIM beta/alpha-barrel Superfamily:Enolase C-terminal domain-like Family:D-glucarate dehydratase-like 106 d1rvka1 not modelled 100.0 21 Fold:TIM beta/alpha-barrel Superfamily:Enolase C-terminal domain-like Family:D-glucarate dehydratase-like 107 c2pa6A_ not modelled 100.0 19 PDB header:lyase Chain: A: PDB Molecule:enolase; PDBTitle: crystal structure of mj0232 from methanococcus jannaschii 108 d1tzza1 not modelled 100.0 15 Fold:TIM beta/alpha-barrel Superfamily:Enolase C-terminal domain-like Family:D-glucarate dehydratase-like 109 d2gdqa1 not modelled 100.0 17 Fold:TIM beta/alpha-barrel Superfamily:Enolase C-terminal domain-like Family:D-glucarate dehydratase-like 110 d2mnra1 not modelled 100.0 22 Fold:TIM beta/alpha-barrel Superfamily:Enolase C-terminal domain-like Family:D-glucarate dehydratase-like 111 c1l8pC_ not modelled 100.0 18 PDB header:lyase Chain: C: PDB Molecule:enolase 1; PDBTitle: mg-phosphonoacetohydroxamate complex of s39a yeast enolase 1 112 c2akmA_ not modelled 100.0 20 PDB header:lyase Chain: A: PDB Molecule:gamma enolase; PDBTitle: fluoride inhibition of enolase: crystal structure of the2 inhibitory complex 113 c1iyxA_ not modelled 100.0 17 PDB header:lyase Chain: A: PDB Molecule:enolase; PDBTitle: crystal structure of enolase from enterococcus hirae 114 c3qn3B_ not modelled 100.0 17 PDB header:lyase Chain: B: PDB Molecule:enolase; PDBTitle: phosphopyruvate hydratase from campylobacter jejuni. 115 c3tqpA_ not modelled 100.0 18 PDB header:lyase Chain: A: PDB Molecule:enolase; PDBTitle: structure of an enolase (eno) from coxiella burnetii 116 d1yeya1 not modelled 100.0 21 Fold:TIM beta/alpha-barrel Superfamily:Enolase C-terminal domain-like Family:D-glucarate dehydratase-like 117 c3uj2C_ not modelled 100.0 20 PDB header:lyase Chain: C: PDB Molecule:enolase 1; PDBTitle: crystal structure of an enolase from anaerostipes caccae (efi target2 efi-502054) with bound mg and sulfate 118 c2ptwA_ not modelled 100.0 17 PDB header:lyase Chain: A: PDB Molecule:enolase; PDBTitle: crystal structure of the t. brucei enolase complexed with2 sulphate, identification of a metal binding site iv 119 d1jdfa1 not modelled 100.0 12 Fold:TIM beta/alpha-barrel Superfamily:Enolase C-terminal domain-like Family:D-glucarate dehydratase-like 120 c2fymA_ not modelled 100.0 23 PDB header:lyase Chain: A: PDB Molecule:enolase; PDBTitle: crystal structure of e. coli enolase complexed with the2 minimal binding segment of rnase e.

Binding site prediction

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0