Phyre Home Retrieve Phyre Job Id
Emaill.a.kelley@imperial.ac.uk
DescriptionO13585
DateMon Jul 2 19:10:20 BST 2012
Unique Job ID038ae451182d46d3

Summary 

Top model
Image coloured by rainbow N → C terminus
Model (left) based on template c2f6hX_
Top template information
PDB header:structural protein
Chain: X: PDB Molecule:myosin-2;
PDBTitle: myosin v cargo binding domain
Confidence and coverage
Confidence:100.0% Coverage: 36%
317 residues ( 36% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
499 residues ( 56%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
3D viewing
Interactive 3D view in Jmol

Sequence analysis 

Secondary structure and disorder prediction 

   1........10.........20.........30.........40.........50.........60
Sequence  MNSVWDDARIEDRTVDKPVGSSHAQEKLALVKSTLFKLDQEDRPECDSWVQLVKLICDED
Secondary structure 
SS confidence 
Disorder  ???????
????????????
Disorder confidence 
 
   .........70.........80.........90.........100.........110.........120
Sequence  REEEFTTFKELLREVKNVNDKSVTGVALIHYIIVFDRADYIELLHDNPSGAKLDLNLVDD
Secondary structure 
SS confidence 
Disorder 
?
Disorder confidence 
 
   .........130.........140.........150.........160.........170.........180
Sequence  IVGYTPLMWSFSLQRRNCCLELFNAFDEINFNMTNKAGLTAWDMVPPYSPLSEFLEQNNM
Secondary structure 
SS confidence 
Disorder 
?
Disorder confidence 
 
   .........190.........200.........210.........220.........230.........240
Sequence  FRYRTEVKHEIPQISQPKDTSLLMSNEDSTTKETFDNIDLQVAGLTLSPGANDNMFLDSD
Secondary structure 
SS confidence 
Disorder  ???
???
?
??????????????
?????
???????????
Disorder confidence 
 
   .........250.........260.........270.........280.........290.........300
Sequence  EKNMNHSQGAATLIDPTYTEDYHGTFDYDKLSPDQYLEFSDFDIPQILNLLISLPQKEPH
Secondary structure 
SS confidence 
Disorder  ?????????????????????????
?
?????
Disorder confidence 
 
   .........310.........320.........330.........340.........350.........360
Sequence  MTTYPAGLIYQCIRYADHKIKSKPLVESLINLSLTKILTSVSSNGAAGLVSTEASLQAGD
Secondary structure 
SS confidence 
Disorder  ???
??????????????
Disorder confidence 
 
   .........370.........380.........390.........400.........410.........420
Sequence  IVLQSYWLSCLSFLYYYLCRDDSFFKRHPSVLQELINTIHSIIIELTSSIHCRLISLIDS
Secondary structure 
SS confidence 
Disorder 
??????
Disorder confidence 
 
   .........430.........440.........450.........460.........470.........480
Sequence  TLLAYTTIQDVKQTLYKRDWNFFKKRKQAKLLLKEKNRKQLKEQQKKELHRKSQGQENHE
Secondary structure 
SS confidence 
Disorder 
?
?????????????
???????????????????????????????????????
Disorder confidence 
 
   .........490.........500.........510.........520.........530.........540
Sequence  EEEGQQDGNDSDDRASTNDDNNSSVSLFYDKEILRHLYPPSFEEQMKPSPLKIVQIFGAL
Secondary structure 
SS confidence 
Disorder  ??????????????????????????????
??????????????????
Disorder confidence 
 
   .........550.........560.........570.........580.........590.........600
Sequence  SYVLNLHQTHPIFQQQCLSISVNWFATTLFNKILKDKKKRSLSRAHAIQIRLNLSTLESW
Secondary structure 
SS confidence 
Disorder 
Disorder confidence 
 
   .........610.........620.........630.........640.........650.........660
Sequence  IQNNDFCVPKPMLIDDFMWQRFPMTLIRDVGEIDLSDPILRNVATYKPIDENNKDLIYDT
Secondary structure 
SS confidence 
Disorder 
??????????
????????????????????????
???????????
Disorder confidence 
 
   .........670.........680.........690.........700.........710.........720
Sequence  SNSLFYYQPFHKIAQIHLEPVFQLLQWLQVATTLDSEESLISTMNLLPRITPVQLLKSME
Secondary structure 
SS confidence 
Disorder 
?
?
Disorder confidence 
 
   .........730.........740.........750.........760.........770.........780
Sequence  KYNYELNENKFNSKLKKFLNNKIKDSKMSKADAYLQEHEIPYLVLPTIPEMTDLYSKGPD
Secondary structure 
SS confidence 
Disorder 
?
????
?????????????
??
?
???
???????
Disorder confidence 
 
   .........790.........800.........810.........820.........830.........840
Sequence  SHSFQPFLPGSIQDDVYEIHDVNFKQRQNEPQISRTNSGTSDFTGDEDKAQYETEGVGES
Secondary structure 
SS confidence 
Disorder  ?????
?
??????????????????????????????????
Disorder confidence 
 
   .........850.........860.........870.........880........
Sequence  IDINETVEPESNAFNVGNDDYFKELNIPSSTAQRPAWSNNDDMEQNPW
Secondary structure 
SS confidence 
Disorder  ???????????????????
???
????????????????
Disorder confidence 
 

Confidence Key
High(9)                    Low (0)
?Disordered
Alpha helix
Beta strand

Domain analysis 

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

RankAligned region

PDB 2f6h chain X

3D model

Region: 276 - 766
Aligned: 317
Modelled: 333
Confidence: 100.0%
Identity: 18%
PDB header:structural protein
Chain: X: PDB Molecule:myosin-2;
PDBTitle: myosin v cargo binding domain

Phyre2

PDB 3mmi chain B

3D model

Region: 285 - 746
Aligned: 284
Modelled: 303
Confidence: 100.0%
Identity: 22%
PDB header:motor protein
Chain: B: PDB Molecule:myosin-4;
PDBTitle: crystal structure of the globular tail of myo4p

Phyre2

PDB 3jue chain A

3D model

Region: 2 - 180
Aligned: 168
Modelled: 171
Confidence: 98.9%
Identity: 17%
PDB header:protein transport/endocytosis
Chain: A: PDB Molecule:arfgap with coiled-coil, ank repeat and ph domain-
PDBTitle: crystal structure of arfgap and ank repeat domain of acap1

Phyre2

PDB 1ycs chain B

3D model

Region: 55 - 166
Aligned: 105
Modelled: 112
Confidence: 98.8%
Identity: 20%
PDB header:complex (anti-oncogene/ankyrin repeats)
Chain: B: PDB Molecule:53bp2;
PDBTitle: p53-53bp2 complex

Phyre2

PDB 2b0o chain F

3D model

Region: 2 - 178
Aligned: 162
Modelled: 177
Confidence: 98.5%
Identity: 17%
PDB header:metal binding protein
Chain: F: PDB Molecule:uplc1;
PDBTitle: crystal structure of uplc1 gap domain

Phyre2

PDB 1dcq chain A

3D model

Region: 2 - 177
Aligned: 167
Modelled: 171
Confidence: 98.5%
Identity: 15%
PDB header:metal binding protein
Chain: A: PDB Molecule:pyk2-associated protein beta;
PDBTitle: crystal structure of the arf-gap domain and ankyrin repeats2 of papbeta.

Phyre2

PDB 3lvr chain E

3D model

Region: 2 - 179
Aligned: 163
Modelled: 178
Confidence: 98.3%
Identity: 18%
PDB header:protein transport
Chain: E: PDB Molecule:arf-gap with sh3 domain, ank repeat and ph domain-
PDBTitle: the crystal structure of asap3 in complex with arf6 in transition2 state soaked with calcium

Phyre2

PDB 1sw6 chain A

3D model

Region: 12 - 166
Aligned: 152
Modelled: 154
Confidence: 98.2%
Identity: 20%
PDB header:transcription regulation
Chain: A: PDB Molecule:regulatory protein swi6;
PDBTitle: s. cerevisiae swi6 ankyrin-repeat fragment

Phyre2

PDB 1sw6 chain A

3D model

Region: 12 - 166
Aligned: 152
Modelled: 154
Confidence: 98.2%
Identity: 20%
Fold: beta-hairpin-alpha-hairpin repeat
Superfamily: Ankyrin repeat
Family: Ankyrin repeat

Phyre2

PDB 3kea chain B

3D model

Region: 61 - 179
Aligned: 109
Modelled: 119
Confidence: 98.0%
Identity: 16%
PDB header:viral protein
Chain: B: PDB Molecule:k1l;
PDBTitle: structure function studies of vaccinia virus host-range protein k12 reveal a novel ankyrin repeat interaction surface for k1s function

Phyre2

PDB 1n11 chain A

3D model

Region: 86 - 166
Aligned: 74
Modelled: 81
Confidence: 97.9%
Identity: 12%
Fold: beta-hairpin-alpha-hairpin repeat
Superfamily: Ankyrin repeat
Family: Ankyrin repeat

Phyre2

PDB 1n11 chain A

3D model

Region: 86 - 166
Aligned: 74
Modelled: 81
Confidence: 97.9%
Identity: 12%
PDB header:structural protein
Chain: A: PDB Molecule:ankyrin;
PDBTitle: d34 region of human ankyrin-r and linker

Phyre2

PDB 3ui2 chain A

3D model

Region: 61 - 166
Aligned: 99
Modelled: 106
Confidence: 97.9%
Identity: 21%
PDB header:transport protein
Chain: A: PDB Molecule:signal recognition particle 43 kda protein, chloroplastic;
PDBTitle: crystal structure of the cpsrp54 tail bound to cpsrp43

Phyre2

PDB 1s70 chain B

3D model

Region: 65 - 179
Aligned: 106
Modelled: 115
Confidence: 97.9%
Identity: 21%
Fold: beta-hairpin-alpha-hairpin repeat
Superfamily: Ankyrin repeat
Family: Ankyrin repeat

Phyre2

PDB 1dcq chain A domain 1

3D model

Region: 48 - 178
Aligned: 124
Modelled: 126
Confidence: 97.8%
Identity: 15%
Fold: beta-hairpin-alpha-hairpin repeat
Superfamily: Ankyrin repeat
Family: Ankyrin repeat

Phyre2

PDB 3ehr chain B

3D model

Region: 65 - 176
Aligned: 105
Modelled: 112
Confidence: 97.8%
Identity: 15%
PDB header:signaling protein
Chain: B: PDB Molecule:osteoclast-stimulating factor 1;
PDBTitle: crystal structure of human osteoclast stimulating factor

Phyre2

PDB 3utm chain A

3D model

Region: 52 - 178
Aligned: 118
Modelled: 122
Confidence: 97.7%
Identity: 21%
PDB header:transferase/signaling protein
Chain: A: PDB Molecule:tankyrase-1;
PDBTitle: crystal structure of a mouse tankyrase-axin complex

Phyre2

PDB 2aja chain A domain 1

3D model

Region: 5 - 166
Aligned: 155
Modelled: 160
Confidence: 97.5%
Identity: 6%
Fold: alpha-alpha superhelix
Superfamily: Pseudo ankyrin repeat-like
Family: Pseudo ankyrin repeat

Phyre2

PDB 3deo chain A

3D model

Region: 47 - 166
Aligned: 113
Modelled: 120
Confidence: 97.5%
Identity: 20%
PDB header:protein transport, membrane protein
Chain: A: PDB Molecule:signal recognition particle 43 kda protein;
PDBTitle: structural basis for specific substrate recognition by the2 chloroplast signal recognition particle protein cpsrp43

Phyre2

PDB 2vge chain A

3D model

Region: 55 - 179
Aligned: 119
Modelled: 125
Confidence: 97.3%
Identity: 20%
PDB header:transcription
Chain: A: PDB Molecule:rela-associated inhibitor;
PDBTitle: crystal structure of the c-terminal region of human iaspp

Phyre2
1
c2f6hX_
2
c3mmiB_
3
c3jueA_
4
c1ycsB_
5
c2b0oF_
6
c1dcqA_
7
c3lvrE_
8
c1sw6A_
9
d1sw6a_
10
c3keaB_
11
d1n11a_
12
c1n11A_
13
c3ui2A_
14
d1s70b_
15
d1dcqa1
16
c3ehrB_
17
c3utmA_
18
d2ajaa1
19
c3deoA_
20
c2vgeA_
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99



Detailed template information 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2f6hX_
100.0 18 PDB header:structural protein
Chain: X: PDB Molecule:myosin-2;
PDBTitle: myosin v cargo binding domain
2c3mmiB_
100.0 22 PDB header:motor protein
Chain: B: PDB Molecule:myosin-4;
PDBTitle: crystal structure of the globular tail of myo4p
3c3jueA_
98.9 17 PDB header:protein transport/endocytosis
Chain: A: PDB Molecule:arfgap with coiled-coil, ank repeat and ph domain-
PDBTitle: crystal structure of arfgap and ank repeat domain of acap1
4c1ycsB_
98.8 20 PDB header:complex (anti-oncogene/ankyrin repeats)
Chain: B: PDB Molecule:53bp2;
PDBTitle: p53-53bp2 complex
5c2b0oF_
98.5 17 PDB header:metal binding protein
Chain: F: PDB Molecule:uplc1;
PDBTitle: crystal structure of uplc1 gap domain
6c1dcqA_
98.5 15 PDB header:metal binding protein
Chain: A: PDB Molecule:pyk2-associated protein beta;
PDBTitle: crystal structure of the arf-gap domain and ankyrin repeats2 of papbeta.
7c3lvrE_
98.3 18 PDB header:protein transport
Chain: E: PDB Molecule:arf-gap with sh3 domain, ank repeat and ph domain-
PDBTitle: the crystal structure of asap3 in complex with arf6 in transition2 state soaked with calcium
8c1sw6A_
98.2 20 PDB header:transcription regulation
Chain: A: PDB Molecule:regulatory protein swi6;
PDBTitle: s. cerevisiae swi6 ankyrin-repeat fragment
9d1sw6a_
98.2 20 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
10c3keaB_
98.0 16 PDB header:viral protein
Chain: B: PDB Molecule:k1l;
PDBTitle: structure function studies of vaccinia virus host-range protein k12 reveal a novel ankyrin repeat interaction surface for k1s function
11d1n11a_
97.9 12 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
12c1n11A_
97.9 12 PDB header:structural protein
Chain: A: PDB Molecule:ankyrin;
PDBTitle: d34 region of human ankyrin-r and linker
13c3ui2A_
97.9 21 PDB header:transport protein
Chain: A: PDB Molecule:signal recognition particle 43 kda protein, chloroplastic;
PDBTitle: crystal structure of the cpsrp54 tail bound to cpsrp43
14d1s70b_
97.9 21 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
15d1dcqa1
97.8 15 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
16c3ehrB_
97.8 15 PDB header:signaling protein
Chain: B: PDB Molecule:osteoclast-stimulating factor 1;
PDBTitle: crystal structure of human osteoclast stimulating factor
17c3utmA_
97.7 21 PDB header:transferase/signaling protein
Chain: A: PDB Molecule:tankyrase-1;
PDBTitle: crystal structure of a mouse tankyrase-axin complex
18d2ajaa1
97.5 6 Fold:alpha-alpha superhelix
Superfamily:Pseudo ankyrin repeat-like
Family:Pseudo ankyrin repeat
19c3deoA_
97.5 20 PDB header:protein transport, membrane protein
Chain: A: PDB Molecule:signal recognition particle 43 kda protein;
PDBTitle: structural basis for specific substrate recognition by the2 chloroplast signal recognition particle protein cpsrp43
20c2vgeA_
97.3 20 PDB header:transcription
Chain: A: PDB Molecule:rela-associated inhibitor;
PDBTitle: crystal structure of the c-terminal region of human iaspp
21c2ajaA_
not modelled 97.2 6 PDB header:protein binding
Chain: A: PDB Molecule:ankyrin repeat family protein;
PDBTitle: x-ray structure of an ankyrin repeat family protein q5zsv02 from legionella pneumophila. northeast structural genomics3 consortium target lgr21.
22d1ycsb1
not modelled 97.0 24 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
23d1ot8a_
not modelled 96.9 28 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
24d1wdya_
not modelled 96.9 13 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
25c3ljnA_
not modelled 96.9 11 PDB header:unknown function
Chain: A: PDB Molecule:hypothetical protein;
PDBTitle: ankyrin repeat protein from leishmania major
26c2zgdA_
not modelled 96.9 20 PDB header:de novo protein
Chain: A: PDB Molecule:3 repeat synthetic ankyrin;
PDBTitle: asn-hydroxylation stabilises the ankyrin repeat domain fold
27d1uoha_
not modelled 96.6 17 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
28c3d9hA_
not modelled 96.5 8 PDB header:structural protein, protein binding
Chain: A: PDB Molecule:cdna flj77766, highly similar to homo sapiens
PDBTitle: crystal structure of the splice variant of human asb92 (hasb9-2), an ankyrin repeat protein
29c3t8kB_
not modelled 96.3 9 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: the crystal structure of a functionally unknown protein lebu_0176 from2 leptotrichia buccalis c-1013-b
30d2fo1e1
not modelled 96.3 13 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
31d1ixva_
not modelled 96.2 25 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
32c2xaiD_
not modelled 96.2 10 PDB header:transcription
Chain: D: PDB Molecule:ankyrin repeat and socs box protein 9;
PDBTitle: crystal structure of ankyrin repeat and socs box-containing2 protein 9 (asb9) in complex with elonginb and elonginc
33c2fo1E_
not modelled 96.0 13 PDB header:gene regulation/signalling protein/dna
Chain: E: PDB Molecule:lin-12 protein;
PDBTitle: crystal structure of the csl-notch-mastermind ternary2 complex bound to dna
34d1k1aa_
not modelled 95.9 10 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
35c2xenA_
not modelled 95.9 24 PDB header:de novo protein
Chain: A: PDB Molecule:ni1c mut4;
PDBTitle: structural determinants for improved thermal stability of2 designed ankyrin repeat proteins with a redesigned c-3 capping module.
36c2l6bA_
not modelled 95.8 20 PDB header:de novo protein
Chain: A: PDB Molecule:nr1c;
PDBTitle: nrc consensus ankyrin repeat protein solution structure
37d1myoa_
not modelled 95.7 18 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
38d1iknd_
not modelled 95.7 13 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
39c1ympA_
not modelled 95.6 14 PDB header:transcription
Chain: A: PDB Molecule:notch 1 protein;
PDBTitle: the crystal structure of a partial mouse notch-1 ankyrin2 domain: repeats 4 through 7 preserve an ankyrin fold
40c1ympB_
not modelled 95.6 14 PDB header:transcription
Chain: B: PDB Molecule:notch 1 protein;
PDBTitle: the crystal structure of a partial mouse notch-1 ankyrin2 domain: repeats 4 through 7 preserve an ankyrin fold
41c1n0qB_
not modelled 95.3 23 PDB header:structural protein
Chain: B: PDB Molecule:3 ankyrin repeats;
PDBTitle: 3ank: a designed ankyrin repeat protein with three identical consensus2 repeats
42c3jxiA_
not modelled 95.2 12 PDB header:membrane protein
Chain: A: PDB Molecule:vanilloid receptor-related osmotically activated channel
PDBTitle: crystal structure of the chicken trpv4 ankyrin repeat domain
43c2f8xK_
not modelled 95.1 10 PDB header:transcription/dna
Chain: K: PDB Molecule:neurogenic locus notch homolog protein 1;
PDBTitle: crystal structure of activated notch, csl and maml on hes-12 promoter dna sequence
44c2f37B_
not modelled 95.0 6 PDB header:membrane protein
Chain: B: PDB Molecule:transient receptor potential cation channel
PDBTitle: crystal structure of the ankyrin repeat domain of human2 trpv2
45c1oy3D_
not modelled 94.7 18 PDB header:dna binding protein
Chain: D: PDB Molecule:transcription factor inhibitor i-kappa-b-beta;
PDBTitle: crystal structure of an ikbbeta/nf-kb p65 homodimer complex
46d1oy3d_
not modelled 94.7 18 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
47c3c5rB_
not modelled 94.7 19 PDB header:protein binding
Chain: B: PDB Molecule:brca1-associated ring domain protein 1;
PDBTitle: crystal structure of the bard1 ankyrin repeat domain and its2 functional consequences
48c3eu9B_
not modelled 94.7 9 PDB header:protein binding, methyl-lysine-binding p
Chain: B: PDB Molecule:huntingtin-interacting protein 14;
PDBTitle: the ankyrin repeat domain of huntingtin interacting protein 14
49c3b7bB_
not modelled 94.3 11 PDB header:transferase
Chain: B: PDB Molecule:euchromatic histone-lysine n-methyltransferase 1;
PDBTitle: euhmt1 (glp) ankyrin repeat domain (structure 1)
50c2nyjA_
not modelled 94.0 10 PDB header:transport protein
Chain: A: PDB Molecule:transient receptor potential cation channel
PDBTitle: crystal structure of the ankyrin repeat domain of trpv1
51c2rfaA_
not modelled 94.0 12 PDB header:membrane protein
Chain: A: PDB Molecule:transient receptor potential cation channel subfamily v
PDBTitle: crystal structure of the mouse trpv6 ankyrin repeat domain
52c2v5qC_
not modelled 93.8 20 PDB header:transferase
Chain: C: PDB Molecule:design ankyrin repeat protein;
PDBTitle: crystal structure of wild-type plk-1 kinase domain in2 complex with a selective darpin
53c2kbxA_
not modelled 93.4 16 PDB header:cell adhesion
Chain: A: PDB Molecule:integrin-linked protein kinase;
PDBTitle: solution structure of ilk-pinch complex
54d1blxb_
not modelled 92.8 23 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
55c3hraA_
not modelled 92.3 15 PDB header:structural protein
Chain: A: PDB Molecule:ankyrin repeat family protein;
PDBTitle: crystal structure of ef0377 an ankyrin repeat protein
56c1n0rA_
not modelled 91.9 22 PDB header:structural protein
Chain: A: PDB Molecule:4 ankyrin repeats;
PDBTitle: 4ank: a designed ankyrin repeat protein with four identical2 consensus repeats
57d1ihba_
not modelled 90.9 18 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
58c3v30A_
not modelled 90.6 17 PDB header:protein binding
Chain: A: PDB Molecule:dna-binding protein rfxank;
PDBTitle: crystal structure of the peptide bound complex of the ankyrin repeat2 domains of human rfxank
59c2rfmB_
not modelled 89.2 11 PDB header:protein binding
Chain: B: PDB Molecule:putative ankyrin repeat protein tv1425;
PDBTitle: structure of a thermophilic ankyrin repeat protein
60d1bi7b_
not modelled 87.2 11 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
61c3twtD_
not modelled 86.4 9 PDB header:signaling protein/peptide
Chain: D: PDB Molecule:tankyrase-2;
PDBTitle: crystal structure of arc4 from human tankyrase 2 in complex with2 peptide from human mcl1 (chimeric peptide)
62d1bd8a_
not modelled 86.1 13 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
63c2jabC_
not modelled 84.5 23 PDB header:de novo protein
Chain: C: PDB Molecule:h10-2-g3;
PDBTitle: a designed ankyrin repeat protein evolved to picomolar2 affinity to her2
64c2l1lB_
not modelled 82.2 14 PDB header:nuclear protein
Chain: B: PDB Molecule:exportin-1;
PDBTitle: nmr solution structure of the phi0 pki nes peptide in complex with2 crm1-rangtp
65d2a5ea_
not modelled 74.0 17 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
66d1awcb_
not modelled 70.8 17 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
67c3ebcA_
not modelled 57.4 30 PDB header:hydrolase/dna
Chain: A: PDB Molecule:type-2 restriction enzyme hincii;
PDBTitle: structure of n141a hincii with cognate dna
68d1tx3a1
not modelled 53.4 30 Fold:Restriction endonuclease-like
Superfamily:Restriction endonuclease-like
Family:Restriction endonuclease HincII
69c3fd9C_
not modelled 41.0 25 PDB header:unknown function
Chain: C: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of the transcriptional anti-activator exsd2 from pseudomonas aeruginosa
70c2kuaA_
not modelled 31.7 15 PDB header:apoptosis
Chain: A: PDB Molecule:bcl-2-like protein 10;
PDBTitle: solution structure of a divergent bcl-2 protein
71d1avca1
not modelled 29.8 11 Fold:Annexin
Superfamily:Annexin
Family:Annexin
72c2a2fX_
not modelled 26.3 16 PDB header:protein transport
Chain: X: PDB Molecule:exocyst complex component sec15;
PDBTitle: crystal structure of sec15 c-terminal domain
73d1alaa_
not modelled 26.0 8 Fold:Annexin
Superfamily:Annexin
Family:Annexin
74c2pjwH_
not modelled 25.7 20 PDB header:endocytosis/exocytosis
Chain: H: PDB Molecule:uncharacterized protein yhl002w;
PDBTitle: the vps27/hse1 complex is a gat domain-based scaffold for2 ubiquitin-dependent sorting
75c2l4wA_
not modelled 21.7 27 PDB header:protein transport
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: nmr structure of the xanthomonas virb7
76d1m9ia1
not modelled 20.3 8 Fold:Annexin
Superfamily:Annexin
Family:Annexin
77d1omwg_
not modelled 19.3 26 Fold:Non-globular all-alpha subunits of globular proteins
Superfamily:Transducin (heterotrimeric G protein), gamma chain
Family:Transducin (heterotrimeric G protein), gamma chain
78d2dsya1
not modelled 19.0 35 Fold:TTHA1013/TTHA0281-like
Superfamily:TTHA1013/TTHA0281-like
Family:TTHA0281-like
79d1m9ia2
not modelled 18.1 15 Fold:Annexin
Superfamily:Annexin
Family:Annexin
80c3d1dC_
not modelled 17.0 25 PDB header:nuclear protein
Chain: C: PDB Molecule:rna-induced transcriptional silencing complex
PDBTitle: hexagonal crystal structure of tas3 c-terminal alpha motif
81d1hvda_
not modelled 16.8 17 Fold:Annexin
Superfamily:Annexin
Family:Annexin
82c3k1tA_
not modelled 16.6 21 PDB header:ligase
Chain: A: PDB Molecule:glutamate--cysteine ligase gsha;
PDBTitle: crystal structure of putative gamma-glutamylcysteine synthetase2 (yp_546622.1) from methylobacillus flagellatus kt at 1.90 a3 resolution
83d1mcxa_
not modelled 16.3 20 Fold:Annexin
Superfamily:Annexin
Family:Annexin
84c2kngA_
not modelled 15.9 19 PDB header:dna binding protein
Chain: A: PDB Molecule:protein lsr2;
PDBTitle: solution structure of c-domain of lsr2
85d1i4aa_
not modelled 15.9 15 Fold:Annexin
Superfamily:Annexin
Family:Annexin
86d3cx5a2
not modelled 15.8 19 Fold:LuxS/MPP-like metallohydrolase
Superfamily:LuxS/MPP-like metallohydrolase
Family:MPP-like
87d2ie7a1
not modelled 15.7 17 Fold:Annexin
Superfamily:Annexin
Family:Annexin
88d1aina_
not modelled 15.2 15 Fold:Annexin
Superfamily:Annexin
Family:Annexin
89c1avcA_
not modelled 14.9 11 PDB header:calcium/phospholipid-binding protein
Chain: A: PDB Molecule:annexin vi;
PDBTitle: bovine annexin vi (calcium-bound)
90d1rh6a_
not modelled 14.5 17 Fold:Putative DNA-binding domain
Superfamily:Putative DNA-binding domain
Family:Excisionase-like
91c3n1bA_
not modelled 14.5 15 PDB header:transport protein
Chain: A: PDB Molecule:vacuolar protein sorting-associated protein 54;
PDBTitle: c-terminal domain of vps54 subunit of the garp complex
92d1avca2
not modelled 14.2 12 Fold:Annexin
Superfamily:Annexin
Family:Annexin
93d1w7ba_
not modelled 13.9 14 Fold:Annexin
Superfamily:Annexin
Family:Annexin
94c2jpfA_
not modelled 13.7 20 PDB header:structural genomics
Chain: A: PDB Molecule:hypothetical protein;
PDBTitle: bpp3783_115-220
95c1junB_
not modelled 13.0 18 PDB header:transcription regulation
Chain: B: PDB Molecule:c-jun homodimer;
PDBTitle: nmr study of c-jun homodimer
96c2jqqA_
not modelled 12.9 2 PDB header:protein transport
Chain: A: PDB Molecule:conserved oligomeric golgi complex subunit 2;
PDBTitle: solution structure of saccharomyces cerevisiae conserved2 oligomeric golgi subunit 2 protein (cog2p)
97c1vqzA_
not modelled 12.6 16 PDB header:ligase
Chain: A: PDB Molecule:lipoate-protein ligase, putative;
PDBTitle: crystal structure of a putative lipoate-protein ligase a (sp_1160)2 from streptococcus pneumoniae tigr4 at 1.99 a resolution
98d1jqra_
not modelled 12.5 4 Fold:Nucleotidyltransferase
Superfamily:Nucleotidyltransferase
Family:DNA polymerase beta-like
99d1hm6a_
not modelled 12.5 20 Fold:Annexin
Superfamily:Annexin
Family:Annexin

Binding site prediction 

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