Fold library entry viewer: c1avcA_

Added to library: Tue Mar 16 14:09:29 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Y	R	G	S	I	R	D	F	P	D	F	N	P	S	Q	D	A	E	T	L	Y	N	A	M	K	G	F	G	S	D	K	E	A	I	I	N	L	I	T	S	R	S	N	K	Q	R	Q	E	I	C	Q	N	Y	K	S	L	Y	G	K	D	L	I	A	D	L	K	Y	E	L	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S				S	S														T		S	S	S											T	T	S																	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	K	F	E	R	L	I	V	G	L	M	R	P	P	A	Y	A	D	A	K	E	I	K	D	A	I	S	G	I	G	T	D	E	K	C	L	I	E	I	L	A	S	R	T	N	E	Q	I	H	Q	L	V	A	A	Y	K	D	A	Y	E	R	D	L	E	A	D	I	T	G	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S											S															S	S	S	S													S																										T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	S	G	H	F	R	K	M	L	V	V	L	L	Q	G	T	R	E	E	D	D	V	V	S	E	D	L	V	Q	Q	D	V	Q	D	L	Y	E	A	G	E	L	K	W	G	T	D	E	A	Q	F	I	Y	I	L	G	N	R	S	K	Q	H	L	R	L	V	F	D	E	Y	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T																																				T	T	T	S	S	S													S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	K	T	T	G	K	P	I	E	A	S	I	R	G	E	L	S	G	D	F	E	K	L	M	L	A	V	V	K	C	I	R	S	T	A	E	Y	F	A	E	R	L	F	K	A	M	K	G	L	G	T	R	D	N	T	L	I	R	I	M	V	S	R	S	E	L	D	M	L	D	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S							T	T	S	S																															S	S	S	S													T	T	T	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	R	E	I	F	R	T	K	Y	E	K	S	L	Y	S	M	I	K	N	D	T	S	G	E	Y	K	K	T	L	L	K	L	C	G	G	Q	F	F	P	E	A	A	Q	V	A	Y	Q	M	W	E	L	S	A	V	A	R	V	E	L	K	G	T	V	R	P	A	G	D	F	N	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S	S																																																			S					T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	D	A	D	A	K	A	L	R	K	A	M	K	G	L	G	T	D	E	D	T	I	I	D	I	I	T	H	R	S	N	A	Q	R	Q	Q	I	R	Q	T	F	K	S	H	F	G	R	D	L	M	A	D	L	K	S	E	L	S	G	D	L	A	R	L	I	L	G	L	M	M	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T	S	S	S	S											T	T	S																	S	S																							S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	P	A	H	Y	D	A	K	Q	L	K	K	A	M	E	G	A	G	T	D	E	K	A	L	I	E	I	L	A	T	R	T	N	A	E	I	Q	A	I	N	K	A	Y	K	E	D	Y	H	K	T	L	E	D	A	L	S	S	D	T	S	G	H	F	K	R	I	L	I	S	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	S	S	S	S											T	T																	S	S	S																						T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	T	G	N	R	E	E	G	G	E	D	R	E	R	A	R	E	D	A	Q	V	A	A	E	I	L	T	R	F	M	M	I	L	C	T	R	S	Y	P	D	L	R	R	V	F	Q	E	F	V	K	M	T	N	Y	D	V	E	H	T	I	K	K	E	M	S	G	D	V	R	D	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T						S																												S																	S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	F	V	A	I	V	Q	S	V	K	N	K	P	L	F	F	A	D	K	L	Y	K	S	M	K	G	A	G	T	E	E	K	T	L	T	R	I	M	V	S	R	S	E	I	D	L	L	N	I	R	R	E	F	I	E	K	Y	D	K	S	L	H	Q	A	I	E	G	D	T	S	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																							T	S	S	S	S													T	T	T	T	T													S	S
	.	.	.	.	.	.	.	.	.	640	.	.
Sequence	H	F	L	K	A	L	L	A	I	C	G	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T

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PDB structure

FASTA sequence

Hidden Markov model

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