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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1vqzA_

Fold library idPDB HeaderMoleculeTitle
c1vqzA_PDB header: structural genomics, unknown functionChain: A: PDB Molecule: lipoate-protein ligase, putative;PDBTitle: crystal structure of putative lipoate-protein ligase2 (np_345629.1) from streptococcus pneumoniae tigr4 at 1.993 a resolution


Added to library: Tue Mar 16 14:09:58 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence HXKYIINHSNDTAFNIALEEYAFKHLLDEDQIFLLWINKPSIIVGRHQNTIEEINRDYVRENGIEVVRRI
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Known secondary structure (DSSP)






TT
S

SS
TT

GGGTB
T

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence SGGGAVYHDLNNLNYTIISKEDENKAFDFKSFSTPVINTLAQLGVKAEFTGRNDLEIDGKKFCGNAQAYI
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Known secondary structure (DSSP) S
S


TT

TT


STT

TTTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence NGRIXHHGCLLFDVDLSVLANALKVSKDKFESKGVKSVRARVTNIINELPKKITVEKFRDLLLEYXKKEY
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Known secondary structure (DSSP) TTSS

TTB


SS


S






B

GGGT
SS



 .........220.........230.........240.........250.........260.........270.........280
Sequence PEXTEYVFSEEELAEINRIKDTKFGTWDWNYGKSPEFNVRRGIKFTSGKVEVFANVTESKIQDIKIYGDF
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Known secondary structure (DSSP) TT




TTT
T





STTTTS
 .........290.........300.........310.........320.........330
Sequence FGIEDVAAVEDVLRGVKYEREDVLKALKTIDITRYFAGISREEIAEAVVG
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Known secondary structure (DSSP)

SS
TTT
BSSTTS
GGGTSTT




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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