Email l.a.kelley@imperial.ac.uk Description P76205 Date Thu Jan 5 12:20:31 GMT 2012 Unique Job ID aced4d7fdb55803c

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d2ajaa1 100.0 16 Fold:alpha-alpha superhelix Superfamily:Pseudo ankyrin repeat-like Family:Pseudo ankyrin repeat 2 d1n11a_ 100.0 35 Fold:beta-hairpin-alpha-hairpin repeat Superfamily:Ankyrin repeat Family:Ankyrin repeat 3 c1n11A_ 100.0 35 PDB header:structural protein Chain: A: PDB Molecule:ankyrin; PDBTitle: d34 region of human ankyrin-r and linker 4 c2ajaA_ 100.0 20 PDB header:protein binding Chain: A: PDB Molecule:ankyrin repeat family protein; PDBTitle: x-ray structure of an ankyrin repeat family protein q5zsv02 from legionella pneumophila. northeast structural genomics3 consortium target lgr21. 5 c3keaB_ 100.0 19 PDB header:viral protein Chain: B: PDB Molecule:k1l; PDBTitle: structure function studies of vaccinia virus host-range protein k12 reveal a novel ankyrin repeat interaction surface for k1s function 6 c3ljnA_ 100.0 16 PDB header:unknown function Chain: A: PDB Molecule:hypothetical protein; PDBTitle: ankyrin repeat protein from leishmania major 7 c2fo1E_ 100.0 25 PDB header:gene regulation/signalling protein/dna Chain: E: PDB Molecule:lin-12 protein; PDBTitle: crystal structure of the csl-notch-mastermind ternary2 complex bound to dna 8 d1s70b_ 100.0 16 Fold:beta-hairpin-alpha-hairpin repeat Superfamily:Ankyrin repeat Family:Ankyrin repeat 9 d2fo1e1 100.0 25 Fold:beta-hairpin-alpha-hairpin repeat Superfamily:Ankyrin repeat Family:Ankyrin repeat 10 c2xaiD_ 100.0 16 PDB header:transcription Chain: D: PDB Molecule:ankyrin repeat and socs box protein 9; PDBTitle: crystal structure of ankyrin repeat and socs box-containing2 protein 9 (asb9) in complex with elonginb and elonginc 11 d1wdya_ 99.9 21 Fold:beta-hairpin-alpha-hairpin repeat Superfamily:Ankyrin repeat Family:Ankyrin repeat 12 c2f37B_ 99.9 13 PDB header:membrane protein Chain: B: PDB Molecule:transient receptor potential cation channel PDBTitle: crystal structure of the ankyrin repeat domain of human2 trpv2 13 d1uoha_ 99.9 15 Fold:beta-hairpin-alpha-hairpin repeat Superfamily:Ankyrin repeat Family:Ankyrin repeat 14 c3jxiA_ 99.9 14 PDB header:membrane protein Chain: A: PDB Molecule:vanilloid receptor-related osmotically activated channel PDBTitle: crystal structure of the chicken trpv4 ankyrin repeat domain 15 c3eu9B_ 99.9 15 PDB header:protein binding, methyl-lysine-binding p Chain: B: PDB Molecule:huntingtin-interacting protein 14; PDBTitle: the ankyrin repeat domain of huntingtin interacting protein 14 16 c2vgeA_ 99.9 15 PDB header:transcription Chain: A: PDB Molecule:rela-associated inhibitor; PDBTitle: crystal structure of the c-terminal region of human iaspp 17 d1k1aa_ 99.9 26 Fold:beta-hairpin-alpha-hairpin repeat Superfamily:Ankyrin repeat Family:Ankyrin repeat 18 c2f8xK_ 99.9 19 PDB header:transcription/dna Chain: K: PDB Molecule:neurogenic locus notch homolog protein 1; PDBTitle: crystal structure of activated notch, csl and maml on hes-12 promoter dna sequence 19 c3b7bB_ 99.9 18 PDB header:transferase Chain: B: PDB Molecule:euchromatic histone-lysine n-methyltransferase 1; PDBTitle: euhmt1 (glp) ankyrin repeat domain (structure 1) 20 c3d9hA_ 99.9 15 PDB header:structural protein, protein binding Chain: A: PDB Molecule:cdna flj77766, highly similar to homo sapiens PDBTitle: crystal structure of the splice variant of human asb92 (hasb9-2), an ankyrin repeat protein 21 d1sw6a_ not modelled 99.9 16 Fold:beta-hairpin-alpha-hairpin repeat Superfamily:Ankyrin repeat Family:Ankyrin repeat 22 c1sw6A_ not modelled 99.9 16 PDB header:transcription regulation Chain: A: PDB Molecule:regulatory protein swi6; PDBTitle: s. cerevisiae swi6 ankyrin-repeat fragment 23 c1ycsB_ not modelled 99.9 17 PDB header:complex (anti-oncogene/ankyrin repeats) Chain: B: PDB Molecule:53bp2; PDBTitle: p53-53bp2 complex 24 c3ui2A_ not modelled 99.9 15 PDB header:transport protein Chain: A: PDB Molecule:signal recognition particle 43 kda protein, chloroplastic; PDBTitle: crystal structure of the cpsrp54 tail bound to cpsrp43 25 d1iknd_ not modelled 99.9 16 Fold:beta-hairpin-alpha-hairpin repeat Superfamily:Ankyrin repeat Family:Ankyrin repeat 26 c2nyjA_ not modelled 99.9 11 PDB header:transport protein Chain: A: PDB Molecule:transient receptor potential cation channel PDBTitle: crystal structure of the ankyrin repeat domain of trpv1 27 d1oy3d_ not modelled 99.9 15 Fold:beta-hairpin-alpha-hairpin repeat Superfamily:Ankyrin repeat Family:Ankyrin repeat 28 c1oy3D_ not modelled 99.9 15 PDB header:dna binding protein Chain: D: PDB Molecule:transcription factor inhibitor i-kappa-b-beta; PDBTitle: crystal structure of an ikbbeta/nf-kb p65 homodimer complex 29 c3ehrB_ not modelled 99.9 22 PDB header:signaling protein Chain: B: PDB Molecule:osteoclast-stimulating factor 1; PDBTitle: crystal structure of human osteoclast stimulating factor 30 c3t8kB_ not modelled 99.9 13 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: the crystal structure of a functionally unknown protein lebu_0176 from2 leptotrichia buccalis c-1013-b 31 d1ot8a_ not modelled 99.9 19 Fold:beta-hairpin-alpha-hairpin repeat Superfamily:Ankyrin repeat Family:Ankyrin repeat 32 d1ixva_ not modelled 99.9 16 Fold:beta-hairpin-alpha-hairpin repeat Superfamily:Ankyrin repeat Family:Ankyrin repeat 33 d1dcqa1 not modelled 99.9 19 Fold:beta-hairpin-alpha-hairpin repeat Superfamily:Ankyrin repeat Family:Ankyrin repeat 34 c3jueA_ not modelled 99.9 15 PDB header:protein transport/endocytosis Chain: A: PDB Molecule:arfgap with coiled-coil, ank repeat and ph domain- PDBTitle: crystal structure of arfgap and ank repeat domain of acap1 35 c2rfaA_ not modelled 99.9 20 PDB header:membrane protein Chain: A: PDB Molecule:transient receptor potential cation channel subfamily v PDBTitle: crystal structure of the mouse trpv6 ankyrin repeat domain 36 c3deoA_ not modelled 99.9 13 PDB header:protein transport, membrane protein Chain: A: PDB Molecule:signal recognition particle 43 kda protein; PDBTitle: structural basis for specific substrate recognition by the2 chloroplast signal recognition particle protein cpsrp43 37 c3hraA_ not modelled 99.9 20 PDB header:structural protein Chain: A: PDB Molecule:ankyrin repeat family protein; PDBTitle: crystal structure of ef0377 an ankyrin repeat protein 38 c2rfmB_ not modelled 99.9 15 PDB header:protein binding Chain: B: PDB Molecule:putative ankyrin repeat protein tv1425; PDBTitle: structure of a thermophilic ankyrin repeat protein 39 c2b0oF_ not modelled 99.8 16 PDB header:metal binding protein Chain: F: PDB Molecule:uplc1; PDBTitle: crystal structure of uplc1 gap domain 40 c1dcqA_ not modelled 99.8 16 PDB header:metal binding protein Chain: A: PDB Molecule:pyk2-associated protein beta; PDBTitle: crystal structure of the arf-gap domain and ankyrin repeats2 of papbeta. 41 c3twtD_ not modelled 99.8 19 PDB header:signaling protein/peptide Chain: D: PDB Molecule:tankyrase-2; PDBTitle: crystal structure of arc4 from human tankyrase 2 in complex with2 peptide from human mcl1 (chimeric peptide) 42 c2kbxA_ not modelled 99.8 15 PDB header:cell adhesion Chain: A: PDB Molecule:integrin-linked protein kinase; PDBTitle: solution structure of ilk-pinch complex 43 c3lvrE_ not modelled 99.8 16 PDB header:protein transport Chain: E: PDB Molecule:arf-gap with sh3 domain, ank repeat and ph domain- PDBTitle: the crystal structure of asap3 in complex with arf6 in transition2 state soaked with calcium 44 d1ycsb1 not modelled 99.8 16 Fold:beta-hairpin-alpha-hairpin repeat Superfamily:Ankyrin repeat Family:Ankyrin repeat 45 d2a5ea_ not modelled 99.8 15 Fold:beta-hairpin-alpha-hairpin repeat Superfamily:Ankyrin repeat Family:Ankyrin repeat 46 c3c5rB_ not modelled 99.8 20 PDB header:protein binding Chain: B: PDB Molecule:brca1-associated ring domain protein 1; PDBTitle: crystal structure of the bard1 ankyrin repeat domain and its2 functional consequences 47 c2zgdA_ not modelled 99.8 20 PDB header:de novo protein Chain: A: PDB Molecule:3 repeat synthetic ankyrin; PDBTitle: asn-hydroxylation stabilises the ankyrin repeat domain fold 48 d1awcb_ not modelled 99.8 20 Fold:beta-hairpin-alpha-hairpin repeat Superfamily:Ankyrin repeat Family:Ankyrin repeat 49 c1ympB_ not modelled 99.8 14 PDB header:transcription Chain: B: PDB Molecule:notch 1 protein; PDBTitle: the crystal structure of a partial mouse notch-1 ankyrin2 domain: repeats 4 through 7 preserve an ankyrin fold 50 c1ympA_ not modelled 99.8 14 PDB header:transcription Chain: A: PDB Molecule:notch 1 protein; PDBTitle: the crystal structure of a partial mouse notch-1 ankyrin2 domain: repeats 4 through 7 preserve an ankyrin fold 51 c2jabC_ not modelled 99.8 20 PDB header:de novo protein Chain: C: PDB Molecule:h10-2-g3; PDBTitle: a designed ankyrin repeat protein evolved to picomolar2 affinity to her2 52 d1bi7b_ not modelled 99.8 19 Fold:beta-hairpin-alpha-hairpin repeat Superfamily:Ankyrin repeat Family:Ankyrin repeat 53 d1ihba_ not modelled 99.7 18 Fold:beta-hairpin-alpha-hairpin repeat Superfamily:Ankyrin repeat Family:Ankyrin repeat 54 d1myoa_ not modelled 99.7 15 Fold:beta-hairpin-alpha-hairpin repeat Superfamily:Ankyrin repeat Family:Ankyrin repeat 55 d1bd8a_ not modelled 99.7 13 Fold:beta-hairpin-alpha-hairpin repeat Superfamily:Ankyrin repeat Family:Ankyrin repeat 56 d1blxb_ not modelled 99.7 17 Fold:beta-hairpin-alpha-hairpin repeat Superfamily:Ankyrin repeat Family:Ankyrin repeat 57 c2v5qC_ not modelled 99.7 20 PDB header:transferase Chain: C: PDB Molecule:design ankyrin repeat protein; PDBTitle: crystal structure of wild-type plk-1 kinase domain in2 complex with a selective darpin 58 c2xenA_ not modelled 99.7 24 PDB header:de novo protein Chain: A: PDB Molecule:ni1c mut4; PDBTitle: structural determinants for improved thermal stability of2 designed ankyrin repeat proteins with a redesigned c-3 capping module. 59 c2l6bA_ not modelled 99.6 20 PDB header:de novo protein Chain: A: PDB Molecule:nr1c; PDBTitle: nrc consensus ankyrin repeat protein solution structure 60 c1n0qB_ not modelled 99.6 25 PDB header:structural protein Chain: B: PDB Molecule:3 ankyrin repeats; PDBTitle: 3ank: a designed ankyrin repeat protein with three identical consensus2 repeats 61 c1n0rA_ not modelled 99.5 21 PDB header:structural protein Chain: A: PDB Molecule:4 ankyrin repeats; PDBTitle: 4ank: a designed ankyrin repeat protein with four identical2 consensus repeats 62 c2xumS_ not modelled 63.6 22 PDB header:oxidoreductase/peptide Chain: S: PDB Molecule:asp-substrate peptide 2; PDBTitle: factor inhibiting hif (fih) q239h mutant in complex with zn(ii), nog2 and asp-substrate peptide (20-mer) 63 c3zrhA_ not modelled 49.4 15 PDB header:hydrolase Chain: A: PDB Molecule:ubiquitin thioesterase zranb1; PDBTitle: crystal structure of the lys29, lys33-linkage-specific trabid otu2 deubiquitinase domain reveals an ankyrin-repeat ubiquitin binding3 domain (ankubd) 64 d1d1da1 not modelled 41.0 35 Fold:Acyl carrier protein-like Superfamily:Retrovirus capsid dimerization domain-like Family:Retrovirus capsid protein C-terminal domain 65 d2qamc2 not modelled 39.2 57 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 66 c1rl2A_ not modelled 35.7 33 PDB header:ribosomal protein Chain: A: PDB Molecule:protein (ribosomal protein l2); PDBTitle: ribosomal protein l2 rna-binding domain from bacillus2 stearothermophilus 67 d1rl2a2 not modelled 34.5 57 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 68 d1ukfa_ not modelled 31.3 26 Fold:Cysteine proteinases Superfamily:Cysteine proteinases Family:Avirulence protein Avrpph3 69 c2y0iS_ not modelled 28.1 8 PDB header:oxidoreductase/peptide Chain: S: PDB Molecule:tankyrase-2; PDBTitle: factor inhibiting hif-1 alpha in complex with tankyrase-2 (tnks2)2 fragment peptide (21-mer) 70 d1nepa_ not modelled 27.2 13 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:ML domain 71 c2zkrn_ not modelled 26.9 13 PDB header:ribosomal protein/rna Chain: N: PDB Molecule:rna expansion segment es27; PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map 72 c3cixA_ not modelled 26.6 17 PDB header:adomet binding protein Chain: A: PDB Molecule:fefe-hydrogenase maturase; PDBTitle: x-ray structure of the [fefe]-hydrogenase maturase hyde from2 thermotoga maritima in complex with thiocyanate 73 d1vqoa2 not modelled 26.5 25 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 74 c2ftcB_ not modelled 25.2 43 PDB header:ribosome Chain: B: PDB Molecule:mitochondrial ribosomal protein l2; PDBTitle: structural model for the large subunit of the mammalian mitochondrial2 ribosome 75 d2zjra2 not modelled 24.6 57 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 76 c3go5A_ not modelled 22.5 15 PDB header:gene regulation Chain: A: PDB Molecule:multidomain protein with s1 rna-binding domains; PDBTitle: crystal structure of a multidomain protein with nucleic acid binding2 domains (sp_0946) from streptococcus pneumoniae tigr4 at 1.40 a3 resolution 77 d1hnga1 not modelled 19.8 38 Fold:Immunoglobulin-like beta-sandwich Superfamily:Immunoglobulin Family:V set domains (antibody variable domain-like) 78 c1af7A_ not modelled 17.9 29 PDB header:methyltransferase Chain: A: PDB Molecule:chemotaxis receptor methyltransferase cher; PDBTitle: cher from salmonella typhimurium 79 d2j01d2 not modelled 15.2 57 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 80 d1bvua1 not modelled 14.9 14 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Aminoacid dehydrogenase-like, C-terminal domain 81 c1kqsA_ not modelled 14.4 25 PDB header:ribosome Chain: A: PDB Molecule:ribosomal protein l2; PDBTitle: the haloarcula marismortui 50s complexed with a2 pretranslocational intermediate in protein synthesis 82 d7reqb1 not modelled 13.2 11 Fold:TIM beta/alpha-barrel Superfamily:Cobalamin (vitamin B12)-dependent enzymes Family:Methylmalonyl-CoA mutase, N-terminal (CoA-binding) domain 83 d2fd5a1 not modelled 12.2 18 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Tetracyclin repressor-like, N-terminal domain 84 d1wo8a1 not modelled 12.1 26 Fold:Methylglyoxal synthase-like Superfamily:Methylglyoxal synthase-like Family:Methylglyoxal synthase, MgsA 85 d2gsta2 not modelled 12.0 16 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione S-transferase (GST), N-terminal domain 86 d2c4ja2 not modelled 11.9 11 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione S-transferase (GST), N-terminal domain 87 c2k0mA_ not modelled 11.9 11 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution nmr structure of the uncharacterized protein from2 rhodospirillum rubrum gene locus rru_a0810. northeast3 structural genomics target rrr43 88 c2zkra_ not modelled 11.2 25 PDB header:ribosomal protein/rna Chain: A: PDB Molecule:rna expansion segment es3; PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map 89 d2vy4a1 not modelled 11.1 40 Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:CHHC finger 90 c2b66D_ not modelled 11.0 57 PDB header:ribosome Chain: D: PDB Molecule:50s ribosomal protein l2; PDBTitle: 50s ribosomal subunit from a crystal structure of release factor rf1,2 trnas and mrna bound to the ribosome. this file contains the 50s3 subunit from a crystal structure of release factor rf1, trnas and4 mrna bound to the ribosome and is described in remark 400 91 c3rrrB_ not modelled 9.4 38 PDB header:viral protein Chain: B: PDB Molecule:fusion glycoprotein f0; PDBTitle: structure of the rsv f protein in the post-fusion conformation 92 d1czda1 not modelled 9.3 31 Fold:DNA clamp Superfamily:DNA clamp Family:DNA polymerase processivity factor 93 c1d0rA_ not modelled 9.1 50 PDB header:hormone/growth factor Chain: A: PDB Molecule:glucagon-like peptide-1-(7-36)-amide; PDBTitle: solution structure of glucagon-like peptide-1-(7-36)-amide2 in trifluoroethanol/water 94 c1n7qA_ not modelled 8.9 16 PDB header:lyase Chain: A: PDB Molecule:hyaluronidase; PDBTitle: streptococcus pneumoniae hyaluronate lyase w291a/w292a double mutant2 complex with hyaluronan hexasacchride 95 c3ac0B_ not modelled 8.2 17 PDB header:hydrolase Chain: B: PDB Molecule:beta-glucosidase i; PDBTitle: crystal structure of beta-glucosidase from kluyveromyces marxianus in2 complex with glucose 96 d1fhea2 not modelled 8.2 5 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione S-transferase (GST), N-terminal domain 97 d1eg3a1 not modelled 8.1 48 Fold:EF Hand-like Superfamily:EF-hand Family:EF-hand modules in multidomain proteins 98 c3rkiB_ not modelled 8.1 38 PDB header:viral protein Chain: B: PDB Molecule:fusion glycoprotein f0; PDBTitle: structural basis for immunization with post-fusion rsv f to elicit2 high neutralizing antibody titers 99 d1v5ma_ not modelled 7.9 25 Fold:PH domain-like barrel Superfamily:PH domain-like Family:Pleckstrin-homology domain (PH domain)