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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | Fold | Superfamily | Family |
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d2j01d2 | OB-fold | Nucleic acid-binding proteins | Cold shock DNA-binding domain-like |
Added to library: Tue Mar 16 12:58:04 2010 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | A | V | K | K | F | K | P | Y | T | P | S | R | R | F | M | T | V | A | D | F | S | E | I | T | K | T | E | P | E | K | S | L | V | K | P | L | K | K | T | G | G | R | N | N | Q | G | R | I | T | V | R | F | R | G | G | G | H | K | R | L | Y | R | I | I | D | F | K | R | W | D |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | B | S | S | T | T | T | T | T | B | T | T | S | T | T | S | S | S | S | S | B | S | B | S | S | S | S | B | S | S | T | T | B | G | G |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . |
Sequence | K | V | G | I | P | A | K | V | A | A | I | E | Y | D | P | N | R | S | A | R | I | A | L | L | H | Y | V | D | G | E | K | R | Y | I | I | A | P | D | G | L | Q | V | G | Q | Q | V | V | A | G | P | D | A | P | I | Q | |||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | G | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | S | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | T | ![]() | ![]() | S | S | S | S |
Download: | PDB structure | FASTA sequence |
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