Fold library entry viewer: c1n7qA_

Added to library: Tue Mar 16 12:10:41 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	V	K	D	T	Y	T	D	R	L	D	D	W	N	G	I	I	A	G	N	Q	Y	Y	D	S	K	N	D	Q	M	A	K	L	N	Q	E	L	E	G	K	V	A	D	S	L	S	S	I	S	S	Q	A	D	R	I	Y	L	W	E	K	F	S	N	Y	K	T	S	A	N	L	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S														T		G	G	G			T	T																						S			S	S			S		S		S	T	T			T	T	S	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	T	Y	R	K	L	E	E	M	A	K	Q	V	T	N	P	S	S	R	Y	Y	Q	D	E	T	V	V	R	T	V	R	D	S	M	E	W	M	H	K	H	V	Y	N	S	E	K	S	I	V	G	N	A	A	D	Y	E	I	G	T	P	R	A	I	N	N	T	L	S	L	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T		T	T	S	T	T	T	T																			T	S	S	T	T					S							T													T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	E	Y	F	S	D	E	E	I	K	K	Y	T	D	V	I	E	K	F	V	P	D	P	E	H	F	R	K	T	T	D	N	P	F	K	A	L	G	G	N	L	V	D	M	G	R	V	K	V	I	A	G	L	L	R	K	D	D	Q	E	I	S	S	T	I	R	S	I	E	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S	S																S			S	S			S	T	T	S	S	S						T																	T	T													G	G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	V	F	K	L	V	D	Q	G	E	G	F	Y	Q	D	G	S	Y	I	D	H	T	N	V	A	Y	T	G	A	Y	G	N	V	L	I	D	G	L	S	Q	L	L	P	V	I	Q	K	T	K	N	P	I	D	K	D	K	M	Q	T	M	Y	H	W	I	D	K	S	F	A	P	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	S			S	S	S	S				T	T	S					T	T	T				T	T	T																	T	T	S	S	S								T									T	T	G	G	G
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	L	V	N	G	E	L	M	D	M	S	R	G	R	S	I	S	R	A	N	S	E	G	H	V	A	A	V	E	V	L	R	G	I	H	R	I	A	D	M	S	E	G	E	T	K	Q	R	L	Q	S	L	V	K	T	I	V	Q	S	D	S	Y	Y	D	V	F	K	N	L	K	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T				G	G	G	S	G	G	G	G	G		G	G	G																				S																		T		S	S			G	G	G	G			S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	Y	K	D	I	S	L	M	Q	S	L	L	S	D	A	G	V	A	S	V	P	R	T	S	Y	L	S	A	F	N	K	M	D	K	T	A	M	Y	N	A	E	K	G	F	G	F	G	L	S	L	F	S	S	R	T	L	N	Y	E	H	M	N	K	E	N	K	R	G	W	Y	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T	S													G	G	G	T							T	T	T											T	T	S	B	S				B	T	T	B		T	T		T	T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	S	D	G	M	F	Y	L	Y	N	G	D	L	S	H	Y	S	D	G	Y	W	P	T	V	N	P	Y	K	M	P	G	T	T	E	T	D	A	K	R	A	D	S	D	T	G	K	V	L	P	S	A	F	V	G	T	S	K	L	D	D	A	N	A	T	A	T	M	D	F	T	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S	S							S		T	T	T	T		S	S	S	T	T	T	S		T	T	S		T	T										T	T					B		S										S	S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	W	N	Q	T	L	T	A	H	K	S	W	F	M	L	K	D	K	I	A	F	L	G	S	N	I	Q	N	T	S	T	D	T	A	A	T	T	I	D	Q	R	K	L	E	S	S	N	P	Y	K	V	Y	V	N	D	K	E	A	S	L	T	E	Q	E	K	D	Y	P	E	T	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S	S											S	S													S	S	S													T	T	S							T	T							S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	S	V	F	L	E	S	S	D	S	K	K	N	I	G	Y	F	F	F	K	K	S	S	I	S	M	S	K	A	L	Q	K	G	A	W	K	D	I	N	E	G	Q	S	D	K	E	V	E	N	E	F	L	T	I	S	Q	A	H	K	Q	N	G	D	S	Y	G	Y	M	L	I	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S	G	G	G																											B	T	T	S																		S	T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	N	V	D	R	A	T	F	N	Q	M	I	K	E	L	E	S	S	L	I	E	N	N	E	T	L	Q	S	V	Y	D	A	K	Q	G	V	W	G	I	V	K	Y	D	D	S	V	S	T	I	S	N	Q	F	Q	V	L	K	R	G	V	Y	T	I	R	K	E	G	D	E	Y	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S													T	T	T						S	S	S							T	T	T	T							S	S	S						T	T	T					S	S									T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.
Sequence	I	A	Y	Y	N	P	E	T	Q	E	S	A	P	D	Q	E	V	F	K	K	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					B	T	T	T	T	B											-

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PDB structure

FASTA sequence

Hidden Markov model

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