Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c1kqsA_

Fold library idPDB HeaderMoleculeTitle
c1kqsA_PDB header: ribosomeChain: A: PDB Molecule: ribosomal protein l2;PDBTitle: the haloarcula marismortui 50s complexed with a2 pretranslocational intermediate in protein synthesis


Added to library: Tue Mar 16 12:14:09 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GRRIQGQRRGRGTSTFRAPSHRYKADLEHRKVEDGDVIAGTVVDIEHDPARSAPVAAVEFEDGDRRLILA
Predicted secondary structure





































SS confidence





































































Known secondary structure (DSSP)



T

GGGS

GGG










SSS

TTTTTTS

 .........80.........90.........100.........110.........120.........130.........140
Sequence PEGVGVGDELQVGVDAEIAPGNTLPLAEIPEGVPVCNVESSPGDGGKFARASGVNAQLLTHDRNVAVVKL
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP) BTT

TT
BSTT

SSTT
GGGS
TT
SB
SSTTS


BS
STT



SS

 .........150.........160.........170.........180.........190.........200.........210
Sequence PSGEMKRLDPQCRATIGVVGGGGRTDKPFVKAGNKHHKMKARGTKWPNVRGVAMNAVDHPFGGGGRQHPG
Predicted secondary structure







































SS confidence





































































Known secondary structure (DSSP) TTS

TT
S
BSSTTGGGS


STTSS


S


GGGS
TTT
TT

SSSS

S
 .........220.........230.......
Sequence KPKSISRNAPPGRKVGDIASKRTGRGG
Predicted secondary structure


























SS confidence


























Known secondary structure (DSSP) S
S
TT

TTT

ST
S

SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D