Email l.a.kelley@imperial.ac.uk Description P13482 Date Thu Jan 5 11:33:37 GMT 2012 Unique Job ID 0dccd0d7c732942e

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2jg0A_ 100.0 99 PDB header:hydrolase Chain: A: PDB Molecule:periplasmic trehalase; PDBTitle: family 37 trehalase from escherichia coli in complex with 1-2 thiatrehazolin 2 d2jg0a1 100.0 99 Fold:alpha/alpha toroid Superfamily:Six-hairpin glycosidases Family:Trehalase-like 3 c3c67B_ 100.0 17 PDB header:hydrolase Chain: B: PDB Molecule:uncharacterized protein ygjk; PDBTitle: escherichia coli k12 ygjk in a complexed with glucose 4 c2z07A_ 100.0 21 PDB header:hydrolase Chain: A: PDB Molecule:putative uncharacterized protein ttha0978; PDBTitle: crystal structure of uncharacterized conserved protein from2 thermus thermophilus hb8 5 c2okxB_ 99.9 17 PDB header:hydrolase Chain: B: PDB Molecule:rhamnosidase b; PDBTitle: crystal structure of gh78 family rhamnosidase of bacillus sp. gl1 at2 1.9 a 6 c1v7wA_ 99.9 17 PDB header:transferase Chain: A: PDB Molecule:chitobiose phosphorylase; PDBTitle: crystal structure of vibrio proteolyticus chitobiose phosphorylase in2 complex with glcnac 7 d1v7wa1 99.9 17 Fold:alpha/alpha toroid Superfamily:Six-hairpin glycosidases Family:Glycosyltransferase family 36 C-terminal domain 8 c3cihA_ 99.9 13 PDB header:hydrolase Chain: A: PDB Molecule:putative alpha-rhamnosidase; PDBTitle: crystal structure of a putative alpha-rhamnosidase from2 bacteroides thetaiotaomicron 9 c2cqtA_ 99.8 14 PDB header:transferase Chain: A: PDB Molecule:cellobiose phosphorylase; PDBTitle: crystal structure of cellvibrio gilvus cellobiose phosphorylase2 crystallized from sodium/potassium phosphate 10 d1lf6a1 99.8 12 Fold:alpha/alpha toroid Superfamily:Six-hairpin glycosidases Family:Bacterial glucoamylase C-terminal domain-like 11 c1lf6A_ 99.4 14 PDB header:hydrolase Chain: A: PDB Molecule:glucoamylase; PDBTitle: crystal structure of bacterial glucoamylase 12 d1ulva1 99.3 15 Fold:alpha/alpha toroid Superfamily:Six-hairpin glycosidases Family:Bacterial glucoamylase C-terminal domain-like 13 d2fbaa1 98.5 18 Fold:alpha/alpha toroid Superfamily:Six-hairpin glycosidases Family:Glucoamylase 14 c2vn4A_ 98.1 17 PDB header:hydrolase Chain: A: PDB Molecule:glucoamylase; PDBTitle: glycoside hydrolase family 15 glucoamylase from hypocrea2 jecorina 15 d1gaia_ 98.0 20 Fold:alpha/alpha toroid Superfamily:Six-hairpin glycosidases Family:Glucoamylase 16 c3qspB_ 97.8 14 PDB header:hydrolase Chain: B: PDB Molecule:putative uncharacterized protein; PDBTitle: analysis of a new family of widely distributed metal-independent alpha2 mannosidases provides unique insight into the processing of n-linked3 glycans, streptococcus pneumoniae sp_2144 non-productive substrate4 complex with alpha-1,6-mannobiose 17 c2ww1B_ 97.8 13 PDB header:hydrolase Chain: B: PDB Molecule:putative alpha-1,2-mannosidase; PDBTitle: structure of the family gh92 inverting mannosidase bt39902 from bacteroides thetaiotaomicron vpi-5482 in complex with3 thiomannobioside 18 c1ug9A_ 97.7 18 PDB header:hydrolase Chain: A: PDB Molecule:glucodextranase; PDBTitle: crystal structure of glucodextranase from arthrobacter globiformis i42 19 c2eacB_ 97.7 19 PDB header:hydrolase Chain: B: PDB Molecule:alpha-fucosidase; PDBTitle: crystal structure of 1,2-a-l-fucosidase from2 bifidobacterium bifidum in complex with3 deoxyfuconojirimycin 20 d2p0va1 97.6 15 Fold:alpha/alpha toroid Superfamily:Six-hairpin glycosidases Family:CPF0428-like 21 c2p0vA_ not modelled 97.6 15 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein bt3781; PDBTitle: crystal structure of bt3781 protein from bacteroides2 thetaiotaomicron, northeast structural genomics target3 btr58 22 c2rdyB_ not modelled 97.5 14 PDB header:hydrolase Chain: B: PDB Molecule:bh0842 protein; PDBTitle: crystal structure of a putative glycoside hydrolase family2 protein from bacillus halodurans 23 d2nvpa1 not modelled 97.5 15 Fold:alpha/alpha toroid Superfamily:Six-hairpin glycosidases Family:CPF0428-like 24 d1h54a1 not modelled 97.4 12 Fold:alpha/alpha toroid Superfamily:Six-hairpin glycosidases Family:Glycosyltransferase family 36 C-terminal domain 25 c2wvyA_ not modelled 97.1 16 PDB header:hydrolase Chain: A: PDB Molecule:alpha-1,2-mannosidase; PDBTitle: structure of the family gh92 inverting mannosidase bt21992 from bacteroides thetaiotaomicron vpi-5482 26 c1h54B_ not modelled 94.7 16 PDB header:hydrolase Chain: B: PDB Molecule:maltose phosphorylase; PDBTitle: maltose phosphorylase from lactobacillus brevis 27 c3gt5A_ not modelled 89.0 11 PDB header:isomerase Chain: A: PDB Molecule:n-acetylglucosamine 2-epimerase; PDBTitle: crystal structure of an n-acetylglucosamine 2-epimerase family protein2 from xylella fastidiosa 28 c2zzrA_ not modelled 77.8 13 PDB header:hydrolase Chain: A: PDB Molecule:unsaturated glucuronyl hydrolase; PDBTitle: crystal structure of unsaturated glucuronyl hydrolase from2 streptcoccus agalactiae 29 d2afaa1 not modelled 76.4 11 Fold:alpha/alpha toroid Superfamily:Six-hairpin glycosidases Family:N-acylglucosamine (NAG) epimerase 30 c3k7xA_ not modelled 72.5 18 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:lin0763 protein; PDBTitle: crystal structure of the lin0763 protein from listeria2 innocua. northeast structural genomics consortium target3 lkr23. 31 c2gz6B_ not modelled 68.5 11 PDB header:isomerase Chain: B: PDB Molecule:n-acetyl-d-glucosamine 2-epimerase; PDBTitle: crystal structure of anabaena sp. ch1 n-acetyl-d-glucosamine 2-2 epimerase at 2.0 a 32 c3bhwA_ not modelled 66.5 11 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of an uncharacterized protein from magnetospirillum2 magneticum 33 c3ax1A_ not modelled 53.7 18 PDB header:protein binding Chain: A: PDB Molecule:serrate rna effector molecule; PDBTitle: molecular insights into mirna processing by arabidopsis serrate 34 c3racA_ not modelled 52.7 21 PDB header:ligase Chain: A: PDB Molecule:histidine-trna ligase; PDBTitle: crystal strucutre of histidine--trna ligase subunit from2 alicyclobacillus acidocaldarius subsp. acidocaldarius dsm 446. 35 c2idxA_ not modelled 51.1 18 PDB header:transferase Chain: A: PDB Molecule:cob(i)yrinic acid a,c-diamide PDBTitle: structure of human atp:cobalamin adenosyltransferase bound2 to atp. 36 c3pg8B_ not modelled 44.5 18 PDB header:transferase Chain: B: PDB Molecule:phospho-2-dehydro-3-deoxyheptonate aldolase; PDBTitle: truncated form of 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase2 from thermotoga maritima 37 d1iwpa_ not modelled 40.2 18 Fold:TIM beta/alpha-barrel Superfamily:Cobalamin (vitamin B12)-dependent enzymes Family:Diol dehydratase, alpha subunit 38 d1nzpa_ not modelled 37.7 24 Fold:SAM domain-like Superfamily:DNA polymerase beta, N-terminal domain-like Family:DNA polymerase beta, N-terminal domain-like 39 c2q07A_ not modelled 36.8 33 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein af0587; PDBTitle: crystal structure of af0587, a protein of unknown function 40 d1q79a3 not modelled 33.3 10 Fold:Ferredoxin-like Superfamily:PAP/Archaeal CCA-adding enzyme, C-terminal domain Family:Poly(A) polymerase, PAP, C-terminal domain 41 d1wu7a2 not modelled 31.2 35 Fold:Class II aaRS and biotin synthetases Superfamily:Class II aaRS and biotin synthetases Family:Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain 42 d1dq3a2 not modelled 30.6 19 Fold:dsRBD-like Superfamily:YcfA/nrd intein domain Family:PI-Pfui intein middle domain 43 c1wy1B_ not modelled 29.7 40 PDB header:transferase Chain: B: PDB Molecule:hypothetical protein ph0671; PDBTitle: crystal structure of the ph0671 protein from pyrococcus horikoshii ot3 44 d1usya_ not modelled 28.3 28 Fold:Class II aaRS and biotin synthetases Superfamily:Class II aaRS and biotin synthetases Family:Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain 45 d1uj8a1 not modelled 25.9 4 Fold:Another 3-helical bundle Superfamily:IscX-like Family:IscX-like 46 c2cseW_ not modelled 25.4 21 PDB header:virus Chain: W: PDB Molecule:major core protein lambda 1; PDBTitle: features of reovirus outer-capsid protein mu1 revealed by2 electron and image reconstruction of the virion at 7.0-a3 resolution 47 c3k1qB_ not modelled 25.2 29 PDB header:virus Chain: B: PDB Molecule:vp3a, the building block protein of inner shell; PDBTitle: backbone model of an aquareovirus virion by cryo-electron2 microscopy and bioinformatics 48 d1z7ma1 not modelled 24.9 26 Fold:Class II aaRS and biotin synthetases Superfamily:Class II aaRS and biotin synthetases Family:Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain 49 c3k1qC_ not modelled 24.2 29 PDB header:virus Chain: C: PDB Molecule:vp3b, the building block protein of inner shell; PDBTitle: backbone model of an aquareovirus virion by cryo-electron2 microscopy and bioinformatics 50 c1wvtA_ not modelled 24.1 36 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein st2180; PDBTitle: crystal structure of uncharacterized protein st2180 from sulfolobus2 tokodaii 51 d1vr6a1 not modelled 23.1 18 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class I DAHP synthetase 52 d2hfha_ not modelled 22.9 22 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Forkhead DNA-binding domain 53 d3bpya1 not modelled 20.8 13 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Forkhead DNA-binding domain 54 c3lhrA_ not modelled 20.3 14 PDB header:transcription regulator Chain: A: PDB Molecule:zinc finger protein 24; PDBTitle: crystal structure of the scan domain from human znf24 55 c1z7nB_ not modelled 20.3 21 PDB header:transferase Chain: B: PDB Molecule:atp phosphoribosyltransferase regulatory subunit; PDBTitle: atp phosphoribosyl transferase (hiszg atp-prtase) from2 lactococcus lactis with bound prpp substrate 56 d1xg7a_ not modelled 19.8 8 Fold:DNA-glycosylase Superfamily:DNA-glycosylase Family:AgoG-like 57 d1jmsa1 not modelled 18.9 14 Fold:SAM domain-like Superfamily:DNA polymerase beta, N-terminal domain-like Family:DNA polymerase beta, N-terminal domain-like 58 d2bcqa1 not modelled 18.6 29 Fold:SAM domain-like Superfamily:DNA polymerase beta, N-terminal domain-like Family:DNA polymerase beta, N-terminal domain-like 59 c3t4cD_ not modelled 18.3 13 PDB header:transferase Chain: D: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase 1; PDBTitle: crystal structure of 2-dehydro-3-deoxyphosphooctonate aldolase from2 burkholderia ambifaria 60 d2fmpa1 not modelled 17.4 27 Fold:SAM domain-like Superfamily:DNA polymerase beta, N-terminal domain-like Family:DNA polymerase beta, N-terminal domain-like 61 c3od1A_ not modelled 16.5 22 PDB header:transferase Chain: A: PDB Molecule:atp phosphoribosyltransferase regulatory subunit; PDBTitle: the crystal structure of an atp phosphoribosyltransferase regulatory2 subunit/histidyl-trna synthetase from bacillus halodurans c 62 d1nc5a_ not modelled 16.2 10 Fold:alpha/alpha toroid Superfamily:Six-hairpin glycosidases Family:Hypothetical protein YteR 63 d1z3xa1 not modelled 15.2 14 Fold:alpha-alpha superhelix Superfamily:ARM repeat Family:GUN4-associated domain 64 c2q17C_ not modelled 15.0 42 PDB header:unknown function Chain: C: PDB Molecule:formylglycine generating enzyme; PDBTitle: formylglycine generating enzyme from streptomyces coelicolor 65 d1aina_ not modelled 14.9 9 Fold:Annexin Superfamily:Annexin Family:Annexin 66 d1rutx4 not modelled 14.8 71 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:LIM domain 67 c2lmdA_ not modelled 14.4 83 PDB header:transcription Chain: A: PDB Molecule:prospero homeobox protein 1; PDBTitle: minimal constraints solution nmr structure of prospero homeobox2 protein 1 from homo sapiens, northeast structural genomics consortium3 target hr4660b 68 c3c1lB_ not modelled 14.3 19 PDB header:oxidoreductase Chain: B: PDB Molecule:putative antioxidant defense protein mlr4105; PDBTitle: crystal structure of an antioxidant defense protein (mlr4105) from2 mesorhizobium loti maff303099 at 2.00 a resolution 69 c2ah6B_ not modelled 14.1 42 PDB header:transferase Chain: B: PDB Molecule:bh1595, unknown conserved protein; PDBTitle: crystal structure of a putative cobalamin adenosyltransferase (bh1595)2 from bacillus halodurans c-125 at 1.60 a resolution 70 c1wozA_ not modelled 13.8 33 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:177aa long conserved hypothetical protein (st1454); PDBTitle: crystal structure of uncharacterized protein st1454 from sulfolobus2 tokodaii 71 d1rtyb_ not modelled 13.8 33 Fold:Ferritin-like Superfamily:Cobalamin adenosyltransferase-like Family:Cobalamin adenosyltransferase 72 c2yukA_ not modelled 13.6 22 PDB header:transferase Chain: A: PDB Molecule:myeloid/lymphoid or mixed-lineage leukemia PDBTitle: solution structure of the hmg box of human myeloid/lymphoid2 or mixed-lineage leukemia protein 3 homolog 73 c2c1lA_ not modelled 13.3 43 PDB header:hydrolase Chain: A: PDB Molecule:restriction endonuclease; PDBTitle: structure of the bfii restriction endonuclease 74 c2nt8A_ not modelled 13.3 33 PDB header:transferase Chain: A: PDB Molecule:cobalamin adenosyltransferase; PDBTitle: atp bound at the active site of a pduo type atp:co(i)rrinoid2 adenosyltransferase from lactobacillus reuteri 75 c3llbA_ not modelled 12.9 21 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: the crystal structure of the protein pa3983 with unknown2 function from pseudomonas aeruginosa pao1 76 c3co7C_ not modelled 12.8 26 PDB header:transcription/dna Chain: C: PDB Molecule:forkhead box protein o1; PDBTitle: crystal structure of foxo1 dbd bound to dbe2 dna 77 c2r2vB_ not modelled 12.6 27 PDB header:de novo protein Chain: B: PDB Molecule:gcn4 leucine zipper; PDBTitle: sequence determinants of the topology of the lac repressor2 tetrameric coiled coil 78 d2a21a1 not modelled 12.4 15 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class I DAHP synthetase 79 d1rtya_ not modelled 12.4 33 Fold:Ferritin-like Superfamily:Cobalamin adenosyltransferase-like Family:Cobalamin adenosyltransferase 80 c3ha4C_ not modelled 12.3 19 PDB header:unknown function Chain: C: PDB Molecule:mix1; PDBTitle: crystal structure of the type one membrane protein mix1 from2 leishmania 81 d1noga_ not modelled 12.3 50 Fold:Ferritin-like Superfamily:Cobalamin adenosyltransferase-like Family:Cobalamin adenosyltransferase 82 c1nogA_ not modelled 12.3 50 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved hypothetical protein ta0546; PDBTitle: crystal structure of conserved protein 0546 from thermoplasma2 acidophilum 83 c3lzzB_ not modelled 12.0 78 PDB header:unknown function Chain: B: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structures of cupin superfamily bbduf985 from branchiostoma2 belcheri tsingtauense in apo and gdp-bound forms 84 d2zdra2 not modelled 11.9 17 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:NeuB-like 85 d1fp3a_ not modelled 11.9 13 Fold:alpha/alpha toroid Superfamily:Six-hairpin glycosidases Family:N-acylglucosamine (NAG) epimerase 86 c3ke4B_ not modelled 11.8 42 PDB header:transferase Chain: B: PDB Molecule:hypothetical cytosolic protein; PDBTitle: crystal structure of a pduo-type atp:cob(i)alamin adenosyltransferase2 from bacillus cereus 87 c3sz8D_ not modelled 11.7 7 PDB header:transferase Chain: D: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase 2; PDBTitle: crystal structure of 2-dehydro-3-deoxyphosphooctonate aldolase from2 burkholderia pseudomallei 88 c2zhzC_ not modelled 11.3 43 PDB header:transferase Chain: C: PDB Molecule:atp:cob(i)alamin adenosyltransferase, putative; PDBTitle: crystal structure of a pduo-type atp:cobalamin adenosyltransferase2 from burkholderia thailandensis 89 c3ci1A_ not modelled 11.0 33 PDB header:transferase Chain: A: PDB Molecule:cobalamin adenosyltransferase pduo-like protein; PDBTitle: structure of the pduo-type atp:co(i)rrinoid2 adenosyltransferase from lactobacillus reuteri complexed3 with four-coordinate cob(ii)alamin and atp 90 c1xrsB_ not modelled 10.9 15 PDB header:isomerase Chain: B: PDB Molecule:d-lysine 5,6-aminomutase beta subunit; PDBTitle: crystal structure of lysine 5,6-aminomutase in complex with plp,2 cobalamin, and 5'-deoxyadenosine 91 c2g2dA_ not modelled 10.6 50 PDB header:transferase Chain: A: PDB Molecule:atp:cobalamin adenosyltransferase; PDBTitle: crystal structure of a putative pduo-type atp:cobalamin2 adenosyltransferase from mycobacterium tuberculosis 92 d2itka1 not modelled 10.5 25 Fold:WW domain-like Superfamily:WW domain Family:WW domain 93 c2xtdB_ not modelled 10.4 16 PDB header:transcription Chain: B: PDB Molecule:tbl1 f-box-like/wd repeat-containing protein tbl1x; PDBTitle: structure of the tbl1 tetramerisation domain 94 c3iqtA_ not modelled 10.3 15 PDB header:transferase Chain: A: PDB Molecule:signal transduction histidine-protein kinase bara; PDBTitle: structure of the hpt domain of sensor protein bara from escherichia2 coli cft073. 95 d1fs1b1 not modelled 10.2 22 Fold:Skp1 dimerisation domain-like Superfamily:Skp1 dimerisation domain-like Family:Skp1 dimerisation domain-like 96 c1xuzA_ not modelled 10.2 15 PDB header:biosynthetic protein Chain: A: PDB Molecule:polysialic acid capsule biosynthesis protein siac; PDBTitle: crystal structure analysis of sialic acid synthase (neub)from2 neisseria meningitidis, bound to mn2+, phosphoenolpyruvate, and n-3 acetyl mannosaminitol 97 c2bcuA_ not modelled 10.0 28 PDB header:transferase, lyase/dna Chain: A: PDB Molecule:dna polymerase lambda; PDBTitle: dna polymerase lambda in complex with a dna duplex2 containing an unpaired damp and a t:t mismatch 98 d1o65a_ not modelled 10.0 6 Fold:PK beta-barrel domain-like Superfamily:PK beta-barrel domain-like Family:MOSC (MOCO sulphurase C-terminal) domain 99 c2xteH_ not modelled 9.8 16 PDB header:transcription Chain: H: PDB Molecule:f-box-like/wd repeat-containing protein tbl1x; PDBTitle: structure of the tbl1 tetramerisation domain