Fold library entry viewer: d1ulva1

Added to library: Tue Mar 16 13:05:59 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	P	A	T	S	L	T	G	A	L	R	T	Q	Y	D	V	S	L	M	T	V	K	S	H	E	D	K	T	F	P	G	A	F	I	A	S	L	T	I	P	W	G	Q	A	A	S	A	E	T	H	R	E	G	Y	H	A	V	W	A	R	D	M	Y	Q	S	V	T	A	L	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T																		T	T	B		S	S	S	T	T		B		S		S	S		T	T	G	G	G	S			S	S				T	T		S	B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	G	D	E	E	A	A	A	R	G	V	E	W	L	F	T	Y	Q	Q	Q	P	D	G	H	F	P	Q	T	S	R	V	D	G	T	I	G	Q	N	G	I	Q	L	D	E	T	A	F	P	I	L	L	A	N	Q	I	G	R	T	D	A	G	F	Y	R	N	E	L	K	P	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T																T			T	T	S				S		B		T	T	S		B						B	T														T										T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	D	Y	L	V	A	A	G	P	K	T	P	Q	E	R	W	E	E	T	G	G	Y	S	T	S	T	L	A	S	Q	I	A	A	L	A	A	A	A	D	I	A	G	K	N	G	D	A	G	S	A	A	V	Y	R	A	T	A	D	E	W	Q	R	S	T	E	K	W	M	F	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S		B	S	B		T	T	S	S			B																							T	T																		T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	T	N	G	P	V	G	D	G	K	Y	Y	L	R	I	S	A	T	G	N	P	N	D	G	A	T	R	D	W	G	N	G	A	G	V	H	P	E	N	A	V	L	D	G	G	F	L	E	F	V	R	L	G	V	K	A	P	A	D	P	Y	V	A	D	S	L	A	E	T	D	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S		S	S	T	T	S					S			S	S	S		T	T	S							S	T	T						G	G	G			B	G	G	G	G					T	T	S	S		T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	S	I	S	Q	E	T	P	G	G	R	M	W	H	R	Y	T	Y	D	G	Y	G	E	K	A	D	G	S	P	W	D	G	T	G	I	G	R	L	W	P	L	L	S	G	E	R	G	E	Y	A	L	A	N	G	Q	D	A	L	P	Y	L	E	T	M	H	S	A	A	N	A	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T						S	B	T	T				S			T	T	S				S	S						B		T													T	T													T	S		T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
Sequence	Y	M	I	P	E	Q	V	W	D	R	D	E	P	T	S	Y	G	H	E	L	G	R	S	T	G	S	A	S	P	L	S	W	A	M	A	Q	Y	V	R	L	A	A	G	V	K	A	G	A	P	V	E	T	P	Q	N	V	A	A	R	Y	A	A	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S		B	B			S	S			S	S				B	T	S	B		S	S		S	S																		T	S		S	S	S									T

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PDB structure

FASTA sequence

Hidden Markov model

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