Fold library entry viewer: d2nvpa1

Added to library: Tue Mar 16 13:53:30 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	L	S	T	N	E	L	K	E	I	V	R	K	I	G	K	D	L	S	G	K	I	E	D	K	K	L	Q	E	L	F	Y	N	C	F	I	N	T	X	D	T	T	V	E	V	S	E	G	D	A	F	V	I	T	G	D	I	P	A	X	W	L	R	D	S	T	S	Q	V	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S																		T																					T					T	T							S	S	S		S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	H	Y	L	P	F	V	K	E	Y	P	E	L	K	A	I	F	T	G	L	I	N	R	Q	V	K	C	I	F	I	D	P	Y	A	N	A	F	N	K	E	P	N	G	Q	K	W	D	N	D	I	T	K	D	S	P	W	V	W	E	R	K	Y	E	I	D	S	L	C	Y	P	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	G	G	G	T	T	T		G	G	G																			T	T		S				S	S	S	S				S	S			B	S				T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	L	I	H	K	Y	W	K	E	S	G	D	E	T	F	F	N	D	D	I	K	K	A	F	N	X	I	I	D	L	W	R	V	E	Q	Y	H	R	E	K	S	D	Y	S	F	Q	R	L	N	C	S	V	T	D	T	L	S	H	E	G	L	G	T	P	V	T	Y	T	G	X
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														S	S																			G	G	G										B			S		S	S	S				S	S	S	S	S		S					S	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	T	W	S	G	F	R	P	S	D	D	A	C	E	Y	G	Y	L	I	P	A	N	X	F	A	V	V	A	L	R	Y	I	S	E	I	A	E	K	V	Y	K	D	E	E	L	K	E	K	A	D	S	L	R	E	E	I	D	N	A	I	E	K	H	G	K	V	Y	K	E	G	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	B		T	T	S		B		S	S	S		B																					T	S																						T	T	S					T	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	G	E	V	Y	A	Y	E	T	D	G	X	G	N	Y	N	F	X	D	D	A	N	V	P	S	L	L	S	I	P	Y	L	E	Y	K	G	I	E	D	E	V	Y	Q	N	T	R	K	F	I	L	S	K	N	N	R	F	F	F	E	G	K	A	A	K	G	I	G	S	P	H	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	B			S	S	S								S	S	S	S		G	G	G					T	S	S		S	S												T	S	T	T	S	T	T					S	S							T	T	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	P	D	Q	Y	I	W	H	I	A	L	S	X	Q	G	L	T	T	N	N	Q	E	E	I	D	Q	L	I	K	L	L	K	E	T	D	A	G	T	G	Y	X	H	E	G	F	H	V	D	D	P	T	K	F	T	R	D	W	F	A	W	S	N	S	L	F	S	H	F	I	Y	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T													S																	T	S	T	T	S	S	S			S				T	T						S		S
	.	.	.	.	.	.
Sequence	K	V	I	N	K	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T

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PDB structure

FASTA sequence

Hidden Markov model

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