Fold library entry viewer: c2cqtA_

Added to library: Tue Mar 16 12:11:34 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	R	Y	G	H	F	D	D	A	A	R	E	Y	V	I	T	T	P	H	T	P	Y	P	W	I	N	Y	L	G	S	E	Q	F	F	S	L	L	S	H	Q	A	G	G	Y	S	F	Y	R	D	A	K	M	R	R	L	T	R	Y	R	Y	N	N	I	P	A	D	A	G	G	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S					T	T	T	T							S			S	S								S	S	S							T	T	S	B						S		T	T	T	S							T	T		S	S	T	T			B	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Y	L	Y	V	N	D	G	G	D	V	W	T	P	S	W	L	P	V	K	A	D	L	D	H	F	E	A	R	H	G	L	G	Y	S	R	I	T	G	E	R	N	G	L	K	V	E	T	L	F	F	V	P	L	G	E	N	A	E	V	Q	K	V	T	V	T	N	T	S	D	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T					T	T		T	T	T	T				S								S	S									T	T											T	T		S												S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	K	T	A	T	L	F	S	F	V	E	F	C	L	W	N	A	Q	D	D	Q	T	N	Y	Q	R	N	L	S	I	G	E	V	E	V	E	Q	D	G	P	H	G	S	A	I	Y	H	K	T	E	Y	R	E	R	R	D	H	Y	A	V	F	G	V	N	T	R	A	D	G	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																												T	T	T							T	T		S	S	S							T	T	T	T	T	T										S	S			S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	D	T	D	R	D	T	F	V	G	A	Y	N	S	L	G	E	A	S	V	P	R	A	G	K	S	A	D	S	V	A	S	G	W	Y	P	I	G	S	H	S	V	A	V	T	L	Q	P	G	E	S	R	D	L	V	Y	V	L	G	Y	L	E	N	P	D	E	E	K	W	A	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T			G	G	G							T	S				B				S	S														T	T																G	G	G	S	B	S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	D	A	H	Q	V	V	N	K	A	P	A	H	A	L	L	G	R	F	A	T	S	E	Q	V	D	A	A	L	E	A	L	N	S	Y	W	T	N	L	L	S	T	Y	S	V	S	S	T	D	E	K	L	D	R	M	V	N	I	W	N	Q	Y	Q	C	M	V	T	F	N	M	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S		S	B												T	S	S																			T	T	S						S										T													T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	R	S	A	S	F	F	E	T	G	I	G	R	G	M	G	F	R	D	S	N	Q	D	L	L	G	F	V	H	L	I	P	E	R	A	R	E	R	I	I	D	I	A	S	T	Q	F	A	D	G	S	A	Y	H	Q	Y	Q	P	L	T	K	R	G	N	N	D	I	G	S	G	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S	B	S	S	S	S	B	S	S	S														T	T	T	T	T														T	T	B		T	T	S		B		S				T	T	T	T					T	T		S		B
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	N	D	D	P	L	W	L	I	A	G	V	A	A	Y	I	K	E	S	G	D	W	G	I	L	D	E	P	V	P	F	D	N	E	P	G	S	E	V	P	L	F	E	H	L	T	R	S	F	Q	F	T	V	Q	N	R	G	P	H	G	L	P	L	I	G	R	A	D	W	N	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T																			G	G	G	G	G	S				S	T	T		T	T																		T		B		T	T	S	S	B	B		B	T		S	S	S	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	C	L	N	L	N	C	F	S	T	T	P	G	E	S	F	Q	T	T	E	N	Q	A	G	G	V	A	E	S	V	F	I	A	A	Q	F	V	L	Y	G	A	E	Y	A	T	L	A	E	R	R	G	L	A	D	V	A	T	E	A	R	K	Y	V	D	E	V	R	A	A	V	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T			T	T						T	T	S		T	T	T	S				S																											T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	E	H	G	W	D	G	Q	W	F	L	R	A	Y	D	Y	Y	G	N	P	V	G	T	D	A	K	P	E	G	K	I	W	I	E	P	Q	G	F	A	V	M	A	G	I	G	V	G	E	G	P	D	D	A	D	A	P	A	V	K	A	L	D	S	V	N	E	M	L	G	T	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	B		S	S	S	B						T	T	S				S		T	T	S	S	S	S													T	T	T	T			S		T	T		T	T	S																T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	H	G	L	V	L	Q	Y	P	A	Y	T	T	Y	Q	I	E	L	G	E	V	S	T	Y	P	P	G	Y	K	E	N	G	G	I	F	C	H	N	N	P	W	V	I	I	A	E	T	V	V	G	R	G	A	Q	A	F	D	Y	Y	K	R	I	T	P	A	Y	R	E	D	I	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T				S			S			S	S			T	T	T	T	T	G	G	G	S		T	T	B	T	T	B	T	S			G	G	G												T																		G	G	G
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	D	T	H	K	L	E	P	Y	V	Y	A	Q	M	I	A	G	K	E	A	V	R	A	G	E	A	K	N	S	W	L	T	G	T	A	A	W	N	F	V	A	V	S	Q	Y	L	L	G	V	R	P	D	Y	D	G	L	V	V	D	P	Q	I	G	P	D	V	P	S	Y	T	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S		T	T	S								T	T	S	T	T	T	T						S		S													T	T	S						S	S										T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.
Sequence	T	R	V	A	R	G	A	T	Y	E	I	T	V	T	N	S	G	A	P	G	A	R	A	S	L	T	V	D	G	A	P	V	D	G	R	T	V	P	Y	A	P	A	G	S	T	V	R	V	E	V	T	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T													T	T								T	T				S	T	T							T	T

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PDB structure

FASTA sequence

Hidden Markov model

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