Fold library entry viewer: c2rdyB_

Added to library: Tue Mar 16 12:36:25 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	K	I	Q	F	D	F	P	A	S	F	W	T	E	A	L	P	I	G	N	G	N	L	G	A	X	V	F	G	K	V	E	K	E	R	I	A	L	N	E	D	T	L	W	S	G	Y	P	K	D	W	N	N	P	K	A	K	E	V	L	P	K	V	R	E	L	I	A	Q	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S			S	S	G	G	G	S						S	S									S	S									T	T		B	S	S		S																					T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	Y	E	E	A	D	Q	L	S	R	D	X	X	G	P	Y	T	Q	S	Y	L	P	F	G	D	L	N	I	F	X	D	H	G	Q	V	V	A	P	H	Y	H	R	E	L	D	L	S	T	G	I	V	T	V	T	Y	T	I	G	G	V	Q	Y	T	R	E	L	F	V	T	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									G	G	G	S		B						B											S	S		S				S								T	T	T	T									T	T											T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	D	R	A	I	V	V	R	L	T	A	S	K	E	G	F	L	S	F	R	A	K	L	D	S	L	L	R	H	V	S	S	V	E	H	Y	T	I	S	G	T	A	P	E	H	V	S	P	S	Y	Y	D	E	E	N	P	V	R	Y	G	H	P	D	X	S	Q	G	X	T	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T									S	S	T	T											S	S																	S					T	T				S	S							T	T	T			S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	H	G	R	L	A	A	V	N	E	G	G	S	L	K	V	D	A	D	G	L	H	V	X	G	A	T	C	A	T	L	Y	F	S	A	S	T	S	F	D	P	S	T	G	A	S	C	L	E	R	D	P	S	L	R	T	I	E	T	I	K	A	I	C	K	R	G	Y	K	E	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S	S						T	T								S											S			T	T	T	T				T	T																T	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	V	N	R	H	L	E	D	Y	T	K	L	F	N	R	V	S	L	H	L	G	E	S	I	A	P	A	D	X	S	T	D	Q	R	I	K	E	Y	G	S	R	D	L	G	L	V	E	L	L	F	Q	Y	G	R	Y	L	X	I	A	S	S	R	P	G	T	Q	P	A	N	L	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T						S				S		T	T											G	G	G	S																					T	T	S				B	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	G	I	W	N	E	E	T	R	A	P	W	S	S	N	Y	T	L	N	I	N	A	E	X	N	Y	W	P	A	E	T	C	N	L	A	E	L	H	K	P	L	I	H	F	I	E	R	L	A	A	N	G	K	K	T	A	E	I	N	Y	G	A	R	G	W	V	A	H	H	N	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B	T					T	T		G	G	G	G				T	T	T						T	T	T	T	T	T	T	T		G	G	G	G																									S	S					S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	D	L	W	G	Q	T	A	P	V	G	D	F	G	H	G	D	P	V	W	A	F	W	P	X	G	G	V	W	L	T	Q	H	L	W	E	H	Y	T	F	G	E	D	E	A	Y	L	R	D	T	A	Y	P	I	X	K	E	A	A	L	F	C	L	D	W	L	I	E	N	E	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T				S			B	T	T	T	T	S								T	T																									T																				T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	G	Y	L	V	T	S	P	S	T	S	P	E	Q	R	F	R	I	G	E	K	G	Y	A	V	S	S	A	T	T	X	D	L	S	L	I	A	E	C	F	D	N	C	I	Q	A	A	K	R	L	S	I	D	E	D	F	V	K	A	L	S	D	A	K	Q	R	L	L	P	L	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S					S	S	B		B	T	T	B					T	T						B	S																								T																B
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	I	G	K	R	G	Q	L	Q	E	W	S	N	D	F	E	D	E	D	V	H	H	R	H	V	S	H	L	V	G	I	Y	P	G	R	L	I	T	E	Q	S	A	P	N	L	F	E	A	A	K	T	S	L	E	I	R	G	D	E	G	T	G	W	S	L	G	W	K	I	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B		T	T	S	S	B		S	S	S	S					S		T	T		S			G	G	G	T	T	T	T	T			S			T	T	T																	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	W	A	R	F	K	D	G	N	R	C	E	R	L	L	S	N	X	L	T	L	I	K	E	D	E	S	X	Q	H	R	G	G	V	Y	A	N	L	F	G	A	H	P	P	F	Q	I	D	G	N	F	S	A	T	A	G	I	A	E	X	L	L	Q	S	H	Q	G	Y	L	E	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T													S	S	B			T	T				T	T						T	T					S	S	S	B		T																		S	S	S	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	L	P	A	L	P	D	S	W	K	D	G	Y	V	K	G	L	R	G	R	G	G	Y	E	V	D	L	A	W	T	N	G	A	L	V	K	V	E	I	V	S	T	K	T	Q	T	C	E	V	L	T	R	I	S	X	R	I	T	E	S	G	E	E	V	E	G	D	V	L	D	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	T	T			T	T			S									T	T	T									T	T										S	S									S	S							T	T									S	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.
Sequence	G	R	X	S	F	Q	V	E	K	G	K	R	Y	V	L	N	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S								T	T

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PDB structure

FASTA sequence

Hidden Markov model

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