Fold library entry viewer: c2eacB_

Added to library: Tue Mar 16 12:54:52 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	G	D	T	S	K	D	D	W	L	W	Y	K	Q	P	A	S	Q	T	D	A	T	A	T	A	G	G	N	Y	G	N	P	D	N	N	R	W	Q	Q	T	T	L	P	F	G	N	G	K	I	G	G	T	V	W	G	E	V	S	R	E	R	V	T	F	N	E	E	T	L	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	S						S	S		G	G	G	S				S				T	T			S															S	S	S									S	S									T	T		B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	G	G	P	G	S	S	T	S	Y	N	G	G	N	N	E	T	K	G	Q	N	G	A	T	L	R	A	L	N	K	Q	L	A	N	G	A	E	T	V	N	P	G	N	L	T	G	G	E	N	A	A	E	Q	G	N	Y	L	N	W	G	D	I	Y	L	D	Y	G	F	N	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	T	T	S	S	S	S			T	T							G	G	G												T	T		S	B				T	T	S												B													S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	T	V	T	E	Y	R	R	D	L	N	L	S	K	G	K	A	D	V	T	F	K	H	D	G	V	T	Y	T	R	E	Y	F	A	S	N	P	D	N	V	M	V	A	R	L	T	A	S	K	A	G	K	L	N	F	N	V	S	M	P	T	N	T	N	Y	S	K	T	G	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T	T	T									T	T											T	T	T	T									S	S	T	T										B		T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	T	T	T	V	K	G	D	T	L	T	V	K	G	A	L	G	N	N	G	L	L	Y	N	S	Q	I	K	V	V	L	D	N	G	T	L	S	E	G	S	D	G	A	S	L	K	V	S	D	A	K	A	V	T	L	Y	I	A	A	A	T	D	Y	K	Q	K	Y	P	S	Y	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T									T	T	T																					T	T	S	S	S							S											S	B				T	T	T		B
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	T	G	E	T	A	A	E	V	N	T	R	V	A	K	V	V	Q	D	A	A	N	K	G	Y	T	A	V	K	K	A	H	I	D	D	H	S	A	I	Y	D	R	V	K	I	D	L	G	Q	S	G	H	S	S	D	G	A	V	A	T	D	A	L	L	K	A	Y	Q	R	G	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																								T	T					S	S				T	T	S	T	T														T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	A	T	T	A	Q	K	R	E	L	E	T	L	V	Y	K	Y	G	R	Y	L	T	I	G	S	S	R	E	N	S	Q	L	P	S	N	L	Q	G	I	W	S	V	T	A	G	D	N	A	H	G	N	T	P	W	G	S	D	F	H	M	N	V	N	L	Q	M	N	Y	W	P	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																											T	T		S	S			B	T	T	B	T							S	S	T	T	S	S	S	G	G	G	G				T	T	T						T	S	S	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	Y	S	A	N	M	G	E	L	A	E	P	L	I	E	Y	V	E	G	L	V	K	P	G	R	V	T	A	K	V	Y	A	G	A	E	T	T	N	P	E	T	T	P	I	G	E	G	E	G	Y	M	A	H	T	E	N	T	A	Y	G	W	T	A	P	G	Q	S	F	S	W	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	T		G	G	G	G										T																	S	S	T	T	T			T	T	S	S	S						S				S	S				S			S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	W	S	P	A	A	V	P	W	I	L	Q	N	V	Y	E	A	Y	E	Y	S	G	D	P	A	L	L	D	R	V	Y	A	L	L	K	E	E	S	H	F	Y	V	N	Y	M	L	H	K	A	G	S	S	S	G	D	R	L	T	T	G	V	A	Y	S	P	E	Q	G	P	L	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T																																								T						G	G	G		S	S									T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	T	D	G	N	T	Y	E	S	S	L	V	W	Q	M	L	N	D	A	I	E	A	A	K	A	K	G	D	P	D	G	L	V	G	N	T	T	D	C	S	A	D	N	W	A	K	N	D	S	G	N	F	T	D	A	N	A	N	R	S	W	S	C	A	K	S	L	L	K	P	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																									T	T		T	T						S	T	T			G	G	G	G		B		T	T	S		B	S		T	T	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	E	V	G	D	S	G	Q	I	K	E	W	Y	F	E	G	A	L	G	K	K	K	D	G	S	T	I	S	G	Y	Q	A	D	N	Q	H	R	H	M	S	H	L	L	G	L	F	P	G	D	L	I	T	I	D	N	S	E	Y	M	D	A	A	K	T	S	L	R	Y	R	C	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B		T	T	S	S	B		S	S	T	T	B		S	T	T	B	B	T	T	S		B		T	T			S	S	S			S			G	G	G	T	T	T	T	T	S	S	S	S		S	S	S		T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	K	G	N	V	L	Q	S	N	T	G	W	A	I	G	Q	R	I	N	S	W	A	R	T	G	D	G	N	T	T	Y	Q	L	V	E	L	Q	L	K	N	A	M	Y	A	N	L	F	D	Y	H	A	P	F	Q	I	D	G	N	F	G	N	T	S	G	V	D	E	M	L	L	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T																					T																S	B		T	T			B	B	S	S	S	B		T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	S	N	S	T	F	T	D	T	A	G	K	K	Y	V	N	Y	T	N	I	L	P	A	L	P	D	A	W	A	G	G	S	V	S	G	L	V	A	R	G	N	F	T	V	G	T	T	W	K	N	G	K	A	T	E	V	R	L	T	S	N	K	G	K	Q	A	A	V	K	I	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T						T					S	T	T			T	T			S									T	T	T									T	T										S	S									T
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.
Sequence	A	G	G	A	Q	N	Y	E	V	K	N	G	D	T	A	V	N	A	K	V	V	T	N	A	D	G	A	S	L	L	V	F	D	T	T	A	G	T	T	Y	T	I	T	K	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T		G	G	G						T	T											T	T	S										T	T

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PDB structure

FASTA sequence

Hidden Markov model

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