PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c3sz8D_

Fold library id	PDB Header	Molecule	Title
c3sz8D_	PDB header: transferase	Chain: D: PDB Molecule: 2-dehydro-3-deoxyphosphooctonate aldolase 2;	PDBTitle: crystal structure of 2-dehydro-3-deoxyphosphooctonate aldolase from2 burkholderia pseudomallei

Links to external resources
Added to library: Sat Aug 13 09:50:03 2011

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S M N V A I S P G V T A G N S L P F V L F G G I N V L E S L D F T L D V C G E Y V A V T R K L G I P F V F K A S F D K A N R S S I H S Y R G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T S
T
S
T T
S S T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence V G L D E G L K I F A E V K A R F G V P V I T D V H E A E Q A A P V A E I A D V L Q V P A F L A R Q T D L V V A I A K A G K P V N V K K P Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S G G G
S
G G G T T
T
S
T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence F M S P T Q L K H V V S K C G E V G N D R V M L C E R G S S F G Y D N L V V D M L G F R Q M A E T T G G C P V I F D V T H S L Q V L D L A R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
T T S T T
S S S
T T T T T S
T T T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . .

Sequence A G I A V G I A G L F L E A H P D P D R A R P S A L P L H Q L E G L L S Q M K A I D D L V K R M P A L E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S T T
G G G T T

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	M	N	V	A	I	S	P	G	V	T	A	G	N	S	L	P	F	V	L	F	G	G	I	N	V	L	E	S	L	D	F	T	L	D	V	C	G	E	Y	V	A	V	T	R	K	L	G	I	P	F	V	F	K	A	S	F	D	K	A	N	R	S	S	I	H	S	Y	R	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T					T	T	S																																T									S			T	T		S	S	T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	G	L	D	E	G	L	K	I	F	A	E	V	K	A	R	F	G	V	P	V	I	T	D	V	H	E	A	E	Q	A	A	P	V	A	E	I	A	D	V	L	Q	V	P	A	F	L	A	R	Q	T	D	L	V	V	A	I	A	K	A	G	K	P	V	N	V	K	K	P	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S																										S	G	G	G									S						G	G	G	T	T											T		S								T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	F	M	S	P	T	Q	L	K	H	V	V	S	K	C	G	E	V	G	N	D	R	V	M	L	C	E	R	G	S	S	F	G	Y	D	N	L	V	V	D	M	L	G	F	R	Q	M	A	E	T	T	G	G	C	P	V	I	F	D	V	T	H	S	L	Q	V	L	D	L	A	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S		T	T	S											T	T														S	S	S						T	T								T	T	T	S							T	T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Sequence	A	G	I	A	V	G	I	A	G	L	F	L	E	A	H	P	D	P	D	R	A	R	P	S	A	L	P	L	H	Q	L	E	G	L	L	S	Q	M	K	A	I	D	D	L	V	K	R	M	P	A	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S								S		S	T	T								G	G	G																T	T