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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3c67B_

Fold library idPDB HeaderMoleculeTitle
c3c67B_PDB header: hydrolaseChain: B: PDB Molecule: uncharacterized protein ygjk;PDBTitle: escherichia coli k12 ygjk in a complexed with glucose


Added to library: Tue Mar 16 12:26:49 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ADNYKNVINRTGAPQYMKDYDYDDHQRFNPFFDLGAWHGHLLPDGPNTMGGFPGVALLTEEYINFMASNF
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Known secondary structure (DSSP)
TT
TTSS

B




TTSSBSS

B

TT
SB
B

STTTTTS



SSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence DRLTVWQDGKKVDFTLEAYSIPGALVQKLTAKDVQVEMTLRFATPRTSLLETKITSNKPLDLVWDGELLE
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Known secondary structure (DSSP) TT


TT
SSTTSS


 .........150.........160.........170.........180.........190.........200.........210
Sequence KLEAKEGKPLSDKTIAGEYPDYQRKISATRDGLKVTFGKVRATWDLLTSGESEYQVHKSLPVQTEINGNR
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Known secondary structure (DSSP) TTS
S
B
TTT

TT



TTT

S

SS

TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence FTSKAHINGSTTLYTTYSHLLTAQEVSKEQMQIRDILARPAFYLTASQQRWEEYLKKGLTNPDATPEQTR
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Known secondary structure (DSSP) SSS
S



TTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence VAVKAIETLNGNWRSPGGAVKFNTVTPSVTGRWFSGNQTWPWDTWKQAFAMAHFNPDIAKENIRAVFSWQ
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Known secondary structure (DSSP) T

BTTB
S

S
TT
TTT
TT
B
TTT
TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence IQPGDSVRPQDVGFVPDLIAWNLSPERGGDGGNWNERNTKPSLAAWSVMEVYNVTQDKTWVAEMYPKLVA
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Known secondary structure (DSSP)

TT
SS
GGGTT


SBB
SS

GGGTS

SS
B
S







 .........430.........440.........450.........460.........470.........480.........490
Sequence YHDWWLRNRDHNGNGVPEYGATRDKAHNTESGEMLFTVKKGDKEETQSGLNNYARVVEKGQYDSLEIPAQ
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Known secondary structure (DSSP) S
TT
SS





TTTB
TT

BTT


SS
 .........500.........510.........520.........530.........540.........550.........560
Sequence VAASWESGRDDAAVFGFIDKEQLDKYVANGGKRSDWTVKFAENRSQDGTLLGYSLLQESVDQASYMYSDN
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Known secondary structure (DSSP) T
TT
GGGT


TT

GGGG



TT

S
 .........570.........580.........590.........600.........610.........620.........630
Sequence HYLAEMATILGKPEEAKRYRQLAQQLADYINTCMFDPTTQFYYDVRIEDKPLANGCAGKPIVERGKGPEG
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Known secondary structure (DSSP) TT
STTTT



SS

TTS
SS
B
GGG


GGG
 .........640.........650.........660.........670.........680.........690.........700
Sequence WSPLFNGAATQANADAVVKVMLDPKEFNTFVPLGTAALTNPAFGADIYWRGRVWVDQFWFGLKGMERYGY
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Known secondary structure (DSSP) GTT
S
T
TTTT

SS
S
SS
TT
TT

TT
TTTT
TT
 .........710.........720.........730.........740.........750........
Sequence RDDALKLADTFFRHAKGLTADGPIQENYNPLTGAQQGAPNFSWSAAHLYMLYNDFFRK
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Known secondary structure (DSSP) STTTTSSS


S
TTT

S
TT
T



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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