Fold library entry viewer: c1lf6A_

Added to library: Tue Mar 16 14:03:27 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	I	K	I	D	R	F	N	N	I	S	A	V	N	G	P	G	E	E	D	T	W	A	S	A	Q	K	Q	G	V	G	T	A	N	N	Y	V	S	K	V	W	F	T	L	A	N	G	A	I	S	E	V	Y	Y	P	T	I	D	T	A	D	V	K	E	I	K	F	I	V	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S		B			S		S					B				S			S						S	S	S	S									T	T								S	S	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	G	K	S	F	V	P	D	E	T	K	D	A	I	S	K	V	E	K	F	T	D	K	S	L	G	Y	K	L	V	N	T	D	K	K	G	R	Y	R	I	T	K	D	I	F	T	D	V	K	R	N	S	L	I	M	K	A	K	F	E	A	L	E	G	S	I	H	D	Y	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S	S				B												S	S	T	T											T	T	S	S											S	S	S	S											S	S	S		G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	Y	L	A	Y	D	P	H	I	K	N	Q	G	S	Y	N	E	G	Y	V	I	K	A	N	N	N	E	M	L	M	A	K	R	D	N	V	Y	T	A	L	S	S	N	I	G	W	K	G	Y	S	I	G	Y	Y	K	V	N	D	I	M	T	D	L	D	E	N	K	Q	M	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	T	B	S	S	S									T	T									T	T								T	T			S							T	T	T	T	S									S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	K	H	Y	D	S	A	R	G	N	I	I	E	G	A	E	I	D	L	T	K	N	S	E	F	E	I	V	L	S	F	G	Q	S	D	S	E	A	A	K	T	A	L	E	T	L	G	E	D	Y	N	N	L	K	N	N	Y	I	D	E	W	T	K	Y	C	N	T	L	N	N	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S									T	T	T		S										S	S														S																		T	T	S			T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	N	G	K	A	N	S	L	Y	Y	N	S	M	M	I	L	K	A	S	E	D	K	T	N	K	G	A	Y	I	A	S	L	S	I	P	W	G	D	G	Q	R	D	D	N	T	G	G	Y	H	L	V	W	S	R	D	L	Y	H	V	A	N	A	F	I	A	A	G	D	V	D	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T														T	T	B		S	S	S	T	T		B		S		S	S		T	T	G	G	G	S	B	S	B	S			G	G	G	S	B																T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	A	N	R	S	L	D	Y	L	A	K	V	V	K	D	N	G	M	I	P	Q	N	T	W	I	S	G	K	P	Y	W	T	G	I	Q	L	D	E	Q	A	D	P	I	I	L	S	Y	R	L	K	R	Y	D	L	Y	D	S	L	V	K	P	L	A	D	F	I	I	K	I	G	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																S	S			S		B		T	T	S		B																				T	T		G	G	G	T	T	T	T													S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	K	T	G	Q	E	R	W	E	E	I	G	G	Y	S	P	A	T	M	A	A	E	V	A	G	L	T	C	A	A	Y	I	A	E	Q	N	K	D	Y	E	S	A	Q	K	Y	Q	E	K	A	D	N	W	Q	K	L	I	D	N	L	T	Y	T	E	N	G	P	L	G	N	G	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	B	S	S		T	T	S	S			B	B																						T	T																										S	S		S	S	T	T	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	Y	Y	I	R	I	A	G	L	S	D	P	D	A	D	F	M	I	N	I	A	N	G	G	G	V	Y	D	Q	K	E	I	V	D	P	S	F	L	E	L	V	R	L	G	V	K	S	A	D	D	P	K	I	L	N	T	L	K	V	V	D	S	T	I	K	V	D	T	P	K	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S		B	S	S	S		T	T	S							T	T	T	T					G	G	G				G	G	G	G					T	T	S	S		T	T															S					T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	P	S	W	Y	R	Y	N	H	D	G	Y	G	E	P	S	K	T	E	L	Y	H	G	A	G	K	G	R	L	W	P	L	L	T	G	E	R	G	M	Y	E	I	A	A	G	K	D	A	T	P	Y	V	K	A	M	E	K	F	A	N	E	G	G	I	I	S	E	Q	V	W	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S	T	T				S		S	B	T	T	B			S	S	S	S				B	B														T	T														S		T	T	S				S		B		T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.
Sequence	D	T	G	L	P	T	D	S	A	S	P	L	N	W	A	H	A	E	Y	V	I	L	F	A	S	N	I	E	H	K	V	L	D	M	P	D	I	V	Y	K	R	Y	V	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T			B		S	S		S	S																		T	S		T	T	S									T

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PDB structure

FASTA sequence

Hidden Markov model

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