Fold library entry viewer: c1h54B_

Added to library: Tue Mar 16 12:39:29 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	K	R	I	F	E	V	Q	P	W	N	V	I	T	H	T	F	D	P	K	D	K	R	L	Q	E	S	M	T	S	L	G	N	G	Y	M	G	M	R	G	D	F	E	E	G	Y	S	G	D	S	L	Q	G	I	Y	L	G	G	V	W	Y	P	D	K	T	R	V	G	W	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S				S	S					S				G	G	G								T					S	S								T	T				S	S																			S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	N	G	Y	P	K	Y	F	G	K	V	V	N	A	V	N	F	I	K	L	P	I	E	I	N	G	E	P	V	D	L	A	K	D	K	I	S	D	F	T	L	D	L	D	M	H	Q	G	V	L	N	R	S	F	V	V	E	R	G	A	V	R	V	A	L	N	F	Q	R	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T			S										B									T	T					T	T	T	S											T	T	T	T											T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	S	V	A	Q	P	E	L	S	V	Q	K	V	T	V	K	N	L	S	D	A	E	V	D	V	T	L	K	P	S	I	D	A	D	V	M	N	E	E	A	N	Y	D	E	R	F	W	D	V	L	A	T	D	Q	Q	A	D	R	G	S	I	V	A	K	T	T	P	N	P	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	S	T	T												S	S	S																	T	T		T	T	S													S	S												S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	G	T	P	R	F	T	S	G	M	E	M	R	L	V	T	D	L	K	N	V	A	I	T	Q	P	N	E	K	E	V	T	T	A	Y	T	G	K	L	A	P	Q	A	S	A	E	L	E	K	R	V	I	V	V	T	S	R	D	Y	D	T	Q	E	S	L	T	A	A	M	H	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																S	S									B	T	T												T	T														T	T	S		S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	L	S	D	K	V	A	Q	S	S	Y	E	D	L	L	N	A	H	T	A	I	W	A	Q	R	W	E	K	S	D	V	V	I	K	G	D	D	E	S	Q	Q	G	I	R	F	N	L	F	Q	L	F	S	T	Y	Y	G	E	D	A	R	L	N	I	G	P	K	G	F	T	G	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	S																										S																					S	S		T	T					T	T	T	T	S		S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	K	Y	G	G	A	T	Y	W	D	T	E	A	F	A	F	P	V	Y	L	G	I	T	D	P	K	V	T	R	N	L	L	M	Y	R	Y	K	Q	L	D	G	A	Y	I	N	A	Q	E	Q	G	L	K	G	A	L	F	P	M	V	T	F	D	G	I	E	C	H	N	E	W	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	T		B		T														S														T	T											T	T			S					S	S	B	S	S	S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	I	T	F	E	E	I	H	R	N	G	D	I	A	F	A	I	Y	N	Y	T	R	Y	T	G	D	D	S	Y	V	L	H	E	G	A	K	V	L	T	E	I	S	R	F	W	A	D	R	V	H	F	S	K	R	N	N	Q	Y	M	I	H	G	V	T	G	A	D	E	Y	E	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T		T																					T	T	T	T	T																					T	T	T	T						S	B			S		T	T	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	N	V	D	N	N	W	D	T	N	M	L	A	Q	W	T	L	K	Y	T	L	E	I	L	G	K	V	D	Q	D	T	A	K	Q	L	D	V	S	D	E	E	K	T	K	W	Q	D	I	V	D	R	M	Y	L	P	Y	D	K	D	L	N	I	F	V	Q	H	D	G	F	L	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	B	S																					T	T	S									T															T	B						T	T	T	T				S	S	T	T	G	G	G
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	K	D	I	E	P	V	S	S	I	P	A	D	Q	R	P	I	N	Q	N	W	S	W	D	K	I	L	R	S	P	Y	I	K	Q	G	D	V	L	Q	G	I	W	D	F	I	D	D	Y	T	P	E	Q	K	K	A	N	F	D	F	Y	E	P	L	T	V	H	E	S	S	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S					G	G	G	S		G	G	G		S					S								S	S		B	S	S		S								T	G	G	G	S													G	G	G	B				S	T	T	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	P	A	I	H	S	V	L	A	A	D	L	H	Y	E	D	K	A	V	E	L	Y	S	R	T	A	R	L	D	L	D	N	Y	N	N	D	T	T	D	G	L	H	I	T	S	M	T	G	A	W	I	A	V	V	Q	G	F	A	G	M	R	V	R	D	G	Q	L	H	Y	A	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T														T	T	T	T	T	T	T	T	S		G	G	G				G	G	G	G	G								T	T	T	T						T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.
Sequence	F	L	P	K	T	W	T	S	Y	T	F	R	Q	V	F	R	D	R	L	I	E	V	S	V	H	A	D	G	P	H	F	K	L	L	S	G	E	P	L	T	I	D	V	A	G	A	A	A	A	A	A	A	A	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T		S									T	T									T	T									S	S							T	T							T	T

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PDB structure

FASTA sequence

Hidden Markov model

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