Fold library entry viewer: c1v7wA_

Added to library: Tue Mar 16 13:36:12 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	K	Y	G	Y	F	D	N	D	N	R	E	Y	V	I	T	R	P	D	V	P	A	P	W	T	N	Y	L	G	T	E	K	F	C	T	V	I	S	H	N	A	G	G	Y	S	F	Y	N	S	P	E	Y	N	R	V	T	K	F	R	P	N	A	T	F	D	R	P	G	H	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S					T	T	T	T					S		S			S	S								S	S	S							T	T	S	B						S		T	T	T		B		B			B		S	S	S	S		B	S	B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	Y	L	R	D	D	D	S	G	D	Y	W	S	I	S	W	Q	P	V	A	K	S	L	D	E	A	Q	Y	Q	I	R	H	G	L	S	Y	S	K	F	Q	C	D	Y	N	G	I	H	A	R	K	T	L	F	V	P	K	G	E	D	A	E	I	W	D	V	V	I	K	N	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	T						S	S	S	T	T	T	T			T	T	T									T	T									T	T											T	T	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	D	Q	V	R	T	I	S	A	F	S	F	V	E	F	S	F	S	H	I	Q	S	D	N	Q	N	H	Q	M	S	L	Y	S	A	G	T	A	Y	R	P	G	L	I	E	Y	D	L	Y	Y	N	T	D	D	F	E	G	F	Y	Y	L	A	S	T	F	D	P	D	S	Y	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S											B	B			S	S						S						T	T	S							T	T							T	T				T	T	T	T							S	S			S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	G	Q	R	D	R	F	L	G	L	Y	R	D	E	A	N	P	L	A	V	E	Q	G	R	C	S	N	S	A	Q	T	C	Y	N	H	C	G	S	L	H	K	Q	F	T	L	Q	P	G	E	E	I	R	F	A	Y	I	L	G	I	G	K	G	N	G	E	R	L	R	E	H	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T			T	T	S							T	S				B			B	S	S														T	T												S	T	T									T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	Q	D	V	A	N	I	D	A	A	F	A	A	I	K	A	H	W	D	E	R	C	A	K	F	Q	V	K	S	P	N	Q	G	L	D	T	M	I	N	A	W	T	L	Y	Q	A	E	T	C	V	V	W	S	R	F	A	S	F	I	E	V	G	G	R	T	G	L	G	Y	R	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S																				T	T						S									T	T														S	S		S	S	S			S	S			S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	T	A	Q	D	A	I	S	V	P	H	A	N	P	E	M	T	R	K	R	I	V	D	L	L	R	G	Q	V	K	A	G	Y	G	L	H	L	F	D	P	D	W	F	D	P	I	H	G	I	K	D	T	C	S	D	D	H	L	W	L	I	P	T	I	C	K	Y	V	M	E	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	S		T	T	T															T	B		T	T	S		B		S				G	G	G	G						G	G	G		B	S	S	G	G	G	G
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	G	E	T	S	F	F	D	Q	M	I	P	Y	A	D	G	G	E	A	S	V	Y	E	H	M	K	A	A	L	D	F	S	A	E	Y	V	G	Q	T	G	I	C	K	G	L	R	A	D	W	N	D	C	L	N	L	G	G	G	E	S	S	M	V	S	F	L	H	F	W	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G	G	G						T	T	S																			S	B		T	T	S		B				T		S	S	S	T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	Q	E	F	I	D	L	A	K	F	L	G	K	D	Q	D	V	N	T	Y	T	E	M	A	A	N	V	R	E	A	C	E	T	H	L	W	D	D	E	G	G	W	Y	I	R	G	L	T	K	N	G	D	K	I	G	T	A	Q	Q	Q	E	G	R	V	H	L	E	S	N	T	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T																							S			T	T	T	T								T	T	S				S		T	T		S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	A	V	L	S	G	L	A	S	Q	E	R	G	E	Q	A	M	D	A	V	D	E	H	L	F	S	P	Y	G	L	H	L	N	A	P	S	F	S	T	P	N	D	D	I	G	F	V	T	R	V	Y	Q	G	V	K	E	N	G	A	I	F	S	H	P	N	P	W	A	W	V	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T		S																			T	T				S			S				S			T	T	T		G	G	G	G	S		T	T	B	T	T	B	T	S			S	T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	E	T	K	L	G	R	G	D	R	A	M	K	F	Y	D	A	L	N	P	Y	N	Q	N	D	I	I	E	K	R	I	A	E	P	Y	S	Y	V	Q	F	I	M	G	R	D	H	Q	D	H	G	R	A	N	H	P	W	L	T	G	T	S	G	W	A	Y	F	A	V	T	N	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T														G	G	G	G	T	T							S		T	T	S								T	T	S	T	T	T	T						S	S		T												T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	I	L	G	V	Q	S	G	F	T	G	L	S	V	D	P	C	I	P	S	D	W	P	G	F	E	V	T	R	Q	W	R	G	A	T	Y	H	I	Q	V	E	N	P	D	H	V	S	K	G	V	K	S	I	T	L	N	G	A	P	I	Q	G	R	I	P	P	Q	A	Q	G	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S						S	S		B					B			T	T											T	T										T	T			S	B								T	T					S	S	B					T	T
	.	.	.	.	.	.	.	.	.
Sequence	D	N	Q	V	V	V	V	L	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)

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PDB structure

FASTA sequence

Hidden Markov model

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