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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c2c1lA_

Fold library idPDB HeaderMoleculeTitle
c2c1lA_PDB header: hydrolaseChain: A: PDB Molecule: restriction endonuclease;PDBTitle: structure of the bfii restriction endonuclease


Added to library: Tue Mar 16 12:06:33 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MNFFSLHPNVYATGRPKGLIGMLENVWVSNHTPGEGTLYLISGFSNYNGGVRFYETFTEHINQGGRVIAI
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Known secondary structure (DSSP)

TTTSSS

STTT

TTSSSSB
GGGTTTTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence LGGSTSQRLSSRQVVEELLNRGVEVHIINRKRILHAKLYGTSNNLGESLVVSSGNFTGPGMSQNIEASLL
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Known secondary structure (DSSP)

SSS

BBTT

SS



TTS

BSTTTTTTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence LDNNTTQSMGFSWNDMISEMLNQNWHIHNMTNATDASPGWNLLYDERTTNLTLDETERVTLIVTLGHADT
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Known secondary structure (DSSP)
T

TTS


TT

TT
GGGGGSB
TT


SS

GGG


 .........220.........230.........240.........250.........260.........270.........280
Sequence ARIQAAPGTTAGQGTQYFWLSKDSYDFFPPLTIRNRRGTKATYSSLINMNYIDINYTDTQCRVTFEAENN
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Known secondary structure (DSSP) S
TT
GGG
S


TT
TTTSS




TTS

GGGTTTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence FDFRLGTGKLRYTGVAKSNDIAAITRVGDSDYELRIIKQGTPEHSQLDPYAVSFIGNRGKRFGYISNEEF
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Known secondary structure (DSSP)


GGGTTS



TT

SSS
TTSGGG


SSSS
 ........
Sequence GRIIGVTF
Predicted secondary structure

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Known secondary structure (DSSP) T



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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