Fold library entry viewer: c2okxB_

Added to library: Tue Mar 16 13:26:12 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	R	N	W	N	A	S	W	I	W	G	G	Q	E	E	S	P	R	N	E	W	R	C	F	R	G	S	F	D	A	P	A	S	V	E	G	P	A	M	L	H	I	T	A	D	S	R	Y	V	L	F	V	N	G	E	Q	V	G	R	G	P	V	R	S	W	P	K	E	Q	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S						S	S		S	S		T	T													S				S										S							T	T											B	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Y	D	S	Y	D	I	G	G	Q	L	R	P	G	V	R	N	T	I	A	V	L	V	L	H	F	G	V	S	N	F	Y	Y	L	R	G	R	G	G	L	I	A	E	I	E	A	D	G	R	T	L	A	A	T	D	A	A	W	R	T	E	R	L	G	G	Q	R	S	N	S	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	T			T	T	S													S		B	T	T	B														T	T							S	T	T	S						T	T	B		T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	M	A	C	Q	Q	G	F	G	E	V	I	D	A	R	E	L	A	E	D	W	A	L	P	A	F	D	D	G	G	W	A	Q	A	R	S	I	G	P	A	G	T	A	P	W	T	S	L	V	P	R	D	I	P	F	L	T	E	E	K	L	Y	P	A	S	I	Q	S	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B			T	T	S		B						G	G	G			T	T	T	T	S	T	T				T	T	S									T	T		T	T								S	S											S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	R	V	K	A	P	K	Y	A	A	A	L	D	L	R	N	Q	M	V	P	E	S	V	N	H	A	N	P	V	S	Y	C	G	Y	V	A	T	I	L	T	L	E	T	S	G	V	V	T	L	G	F	P	T	G	V	R	G	S	G	V	W	V	D	G	V	L	Q	T	E	W	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S													G	G	G	G	G			S															S	S									T	T			S	S	S					T	T							B
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	G	V	Q	P	E	R	Y	Y	S	L	N	L	A	A	G	E	H	L	V	L	V	D	I	T	S	S	D	H	G	G	S	S	H	F	A	I	D	S	E	A	A	F	T	L	R	S	P	A	G	D	N	G	V	P	L	A	T	I	G	T	F	D	Q	S	E	Y	I	D	H	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	T	T										S															S	S									S	S							S	S			S	S		S							S							T	T	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	P	G	R	R	M	Q	T	D	H	P	D	Y	R	A	L	P	E	A	A	P	T	A	A	A	L	E	A	F	A	S	W	V	K	P	F	E	P	S	L	Y	T	E	E	N	V	F	G	S	N	V	W	R	T	L	A	E	R	R	A	V	P	R	S	V	L	N	A	I	L	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				S	S					G	G	G	G	G	G						G	G	G			S											S									G	G	G	G	G	G	G	S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	V	P	E	P	G	V	L	P	V	F	E	D	G	D	C	E	L	V	I	D	L	G	A	E	R	S	G	F	I	G	F	E	L	E	A	P	A	G	T	I	I	D	A	Y	G	V	E	Y	M	R	E	G	Y	T	Q	H	T	Y	G	L	D	N	T	F	R	Y	I	C	R	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S								S	S	S																								T	T									S				T	T						T	T											S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	G	R	Q	S	Y	V	S	P	V	R	R	G	F	R	Y	L	F	L	T	V	R	G	N	S	A	P	V	K	L	H	E	I	Y	I	R	Q	S	T	Y	P	V	A	E	Q	G	S	F	R	C	S	D	A	L	L	N	A	T	W	E	I	S	R	H	T	T	R	L	C	M	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S													S		S	S														S											S																		T	B	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	D	T	F	V	D	C	P	S	Y	E	Q	V	F	W	V	G	D	S	R	N	E	A	L	V	N	Y	Y	V	F	G	E	T	E	I	V	E	R	C	L	N	L	V	P	G	S	A	D	E	T	P	L	Y	L	D	Q	V	P	S	A	W	S	S	V	I	P	N	W	T	F	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	B		S		T	T	T	T				B															T													G	G	G	G	T	T	T		T	T			S	B	S	S		S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	W	I	L	A	C	R	E	Y	A	A	H	T	G	N	E	A	F	A	A	R	I	W	P	A	V	K	H	T	L	T	H	Y	L	E	H	I	D	D	S	G	L	L	N	M	A	G	W	N	L	L	D	W	A	P	I	D	Q	P	N	E	G	I	V	T	H	Q	N	L	F	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T																					T	T	B		T	T	S	S	B				S						S	S	S					S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	V	K	A	L	R	D	S	R	A	L	A	A	A	A	G	A	T	E	E	A	D	A	F	A	A	R	A	D	L	L	A	E	T	I	N	A	V	L	W	D	E	E	K	R	A	Y	I	D	C	I	H	A	D	G	R	R	S	D	V	Y	S	M	Q	T	Q	V	V	A	Y	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T		G	G	G	G																		S			T	T	T	T				S				T	T	S		B					B
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	C	G	V	A	Q	G	E	R	E	A	V	I	E	G	Y	L	S	S	P	P	P	A	F	V	Q	I	G	S	P	F	M	S	F	F	Y	Y	E	A	L	E	K	A	G	R	Q	T	L	M	L	D	D	I	R	R	N	Y	G	Q	M	L	R	Y	D	A	T	T	C	W	E	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T		S		T												S			T	T	S	B				S														T	T													T						T	T		S	S			S	S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	Y	P	N	F	A	E	N	R	S	N	P	D	M	L	T	R	S	H	C	H	A	W	S	A	A	P	G	Y	F	L	G	S	S	I	L	G	V	K	R	G	A	D	G	W	R	T	V	D	I	A	P	Q	P	C	D	L	T	W	A	E	G	V	V	P	L	P	Q	G	G	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S			T	T	S	S	S	T	T	S	S		S		S			G	G	G		T								T	T	S						S	G	G	G	S									T	T		S									T	T	S	S
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.
Sequence	I	A	V	S	W	E	F	V	S	A	G	K	L	K	L	R	I	E	A	P	E	D	I	E	V	N	V	T	L	P	E	G	I	E	G	E	V	T	Q	V	K	Y	M	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T										T	T	S								T	T

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PDB structure

FASTA sequence

Hidden Markov model

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