Phyre Home Retrieve Phyre Job Id
Emaill.a.kelley@imperial.ac.uk
DescriptionP20749
DateTue Apr 3 15:06:46 BST 2012
Unique Job ID34106c6e40501ee3

Summary 

Top model
Image coloured by rainbow N → C terminus
Model (left) based on template d1n11a_
Top template information
Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
Confidence and coverage
Confidence:100.0% Coverage: 52%
238 residues ( 52% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
3D viewing
Interactive 3D view in Jmol

Sequence analysis 

Secondary structure and disorder prediction 

   1........10.........20.........30.........40.........50.........60
Sequence  MPRCPAGAMDEGPVDLRTRPKAAGLPGAALPLRKRPLRAPSPEPAAPRGAAGLVVPLDPL
Secondary structure 


















SS confidence 



























































Disorder  ?????






















































Disorder confidence 



























































 
   .........70.........80.........90.........100.........110.........120
Sequence  RGGCDLPAVPGPPHGLARPEALYYPGALLPLYPTRAMGSPFPLVNLPTPLYPMMCPMEHP
Secondary structure 

























SS confidence 



























































Disorder 



























































Disorder confidence 



























































 
   .........130.........140.........150.........160.........170.........180
Sequence  LSADIAMATRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAV
Secondary structure 





























SS confidence 



























































Disorder 











?














































Disorder confidence 



























































 
   .........190.........200.........210.........220.........230.........240
Sequence  ITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNY
Secondary structure 

































SS confidence 



























































Disorder 


























































?
Disorder confidence 



























































 
   .........250.........260.........270.........280.........290.........300
Sequence  DGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGA
Secondary structure 


























SS confidence 



























































Disorder 































?


























Disorder confidence 



























































 
   .........310.........320.........330.........340.........350.........360
Sequence  NVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRG
Secondary structure 





























SS confidence 



























































Disorder 






































?



















Disorder confidence 



























































 
   .........370.........380.........390.........400.........410.........420
Sequence  KATRPASTSQPDPSPDRSANTSPESSSRLSSNGLLSASPSSSPSQSPPRDPPGFPMAPPN
Secondary structure 
































SS confidence 



























































Disorder 











?


























?
??
?













Disorder confidence 



























































 
   .........430.........440.........450....
Sequence  FFLPSPSPPAFLPFAGVLRGPGRPVPPSPAPGGS
Secondary structure 















SS confidence 

































Disorder 


























???????
Disorder confidence 

































 

Confidence Key
High(9)                    Low (0)
?Disordered
Alpha helix
Beta strand

Domain analysis 

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

RankAligned region

PDB 1n11 chain A

3D model

Region: 136 - 377
Aligned: 238
Modelled: 242
Confidence: 100.0%
Identity: 36%
Fold: beta-hairpin-alpha-hairpin repeat
Superfamily: Ankyrin repeat
Family: Ankyrin repeat

Phyre2

PDB 1n11 chain A

3D model

Region: 136 - 377
Aligned: 238
Modelled: 242
Confidence: 100.0%
Identity: 36%
PDB header:structural protein
Chain: A: PDB Molecule:ankyrin;
PDBTitle: d34 region of human ankyrin-r and linker

Phyre2

PDB 3utm chain A

3D model

Region: 125 - 363
Aligned: 232
Modelled: 239
Confidence: 100.0%
Identity: 31%
PDB header:transferase/signaling protein
Chain: A: PDB Molecule:tankyrase-1;
PDBTitle: crystal structure of a mouse tankyrase-axin complex

Phyre2

PDB 3kea chain B

3D model

Region: 125 - 372
Aligned: 204
Modelled: 211
Confidence: 100.0%
Identity: 19%
PDB header:viral protein
Chain: B: PDB Molecule:k1l;
PDBTitle: structure function studies of vaccinia virus host-range protein k12 reveal a novel ankyrin repeat interaction surface for k1s function

Phyre2

PDB 1k1a chain A

3D model

Region: 133 - 360
Aligned: 228
Modelled: 228
Confidence: 100.0%
Identity: 100%
Fold: beta-hairpin-alpha-hairpin repeat
Superfamily: Ankyrin repeat
Family: Ankyrin repeat

Phyre2

PDB 2fo1 chain E

3D model

Region: 132 - 362
Aligned: 226
Modelled: 226
Confidence: 100.0%
Identity: 20%
PDB header:gene regulation/signalling protein/dna
Chain: E: PDB Molecule:lin-12 protein;
PDBTitle: crystal structure of the csl-notch-mastermind ternary2 complex bound to dna

Phyre2

PDB 1s70 chain B

3D model

Region: 130 - 372
Aligned: 235
Modelled: 243
Confidence: 100.0%
Identity: 24%
Fold: beta-hairpin-alpha-hairpin repeat
Superfamily: Ankyrin repeat
Family: Ankyrin repeat

Phyre2

PDB 3ljn chain A

3D model

Region: 131 - 364
Aligned: 228
Modelled: 234
Confidence: 100.0%
Identity: 21%
PDB header:unknown function
Chain: A: PDB Molecule:hypothetical protein;
PDBTitle: ankyrin repeat protein from leishmania major

Phyre2

PDB 2xai chain D

3D model

Region: 136 - 362
Aligned: 221
Modelled: 227
Confidence: 100.0%
Identity: 20%
PDB header:transcription
Chain: D: PDB Molecule:ankyrin repeat and socs box protein 9;
PDBTitle: crystal structure of ankyrin repeat and socs box-containing2 protein 9 (asb9) in complex with elonginb and elonginc

Phyre2

PDB 2aja chain A domain 1

3D model

Region: 127 - 365
Aligned: 233
Modelled: 239
Confidence: 100.0%
Identity: 13%
Fold: alpha-alpha superhelix
Superfamily: Pseudo ankyrin repeat-like
Family: Pseudo ankyrin repeat

Phyre2

PDB 2fo1 chain E domain 1

3D model

Region: 136 - 362
Aligned: 222
Modelled: 223
Confidence: 100.0%
Identity: 19%
Fold: beta-hairpin-alpha-hairpin repeat
Superfamily: Ankyrin repeat
Family: Ankyrin repeat

Phyre2

PDB 1wdy chain A

3D model

Region: 131 - 372
Aligned: 238
Modelled: 242
Confidence: 100.0%
Identity: 24%
Fold: beta-hairpin-alpha-hairpin repeat
Superfamily: Ankyrin repeat
Family: Ankyrin repeat

Phyre2

PDB 3eu9 chain B

3D model

Region: 131 - 363
Aligned: 227
Modelled: 233
Confidence: 100.0%
Identity: 14%
PDB header:protein binding, methyl-lysine-binding p
Chain: B: PDB Molecule:huntingtin-interacting protein 14;
PDBTitle: the ankyrin repeat domain of huntingtin interacting protein 14

Phyre2

PDB 1uoh chain A

3D model

Region: 134 - 363
Aligned: 221
Modelled: 230
Confidence: 100.0%
Identity: 19%
Fold: beta-hairpin-alpha-hairpin repeat
Superfamily: Ankyrin repeat
Family: Ankyrin repeat

Phyre2

PDB 3d9h chain A

3D model

Region: 131 - 365
Aligned: 222
Modelled: 228
Confidence: 100.0%
Identity: 18%
PDB header:structural protein, protein binding
Chain: A: PDB Molecule:cdna flj77766, highly similar to homo sapiens
PDBTitle: crystal structure of the splice variant of human asb92 (hasb9-2), an ankyrin repeat protein

Phyre2

PDB 3b7b chain B

3D model

Region: 137 - 367
Aligned: 223
Modelled: 231
Confidence: 100.0%
Identity: 22%
PDB header:transferase
Chain: B: PDB Molecule:euchromatic histone-lysine n-methyltransferase 1;
PDBTitle: euhmt1 (glp) ankyrin repeat domain (structure 1)

Phyre2

PDB 2aja chain A

3D model

Region: 127 - 366
Aligned: 233
Modelled: 240
Confidence: 100.0%
Identity: 13%
PDB header:protein binding
Chain: A: PDB Molecule:ankyrin repeat family protein;
PDBTitle: x-ray structure of an ankyrin repeat family protein q5zsv02 from legionella pneumophila. northeast structural genomics3 consortium target lgr21.

Phyre2

PDB 1ixv chain A

3D model

Region: 136 - 367
Aligned: 226
Modelled: 232
Confidence: 100.0%
Identity: 21%
Fold: beta-hairpin-alpha-hairpin repeat
Superfamily: Ankyrin repeat
Family: Ankyrin repeat

Phyre2

PDB 2f8x chain K

3D model

Region: 137 - 366
Aligned: 217
Modelled: 230
Confidence: 100.0%
Identity: 21%
PDB header:transcription/dna
Chain: K: PDB Molecule:neurogenic locus notch homolog protein 1;
PDBTitle: crystal structure of activated notch, csl and maml on hes-12 promoter dna sequence

Phyre2

PDB 1ikn chain D

3D model

Region: 134 - 384
Aligned: 215
Modelled: 220
Confidence: 100.0%
Identity: 26%
Fold: beta-hairpin-alpha-hairpin repeat
Superfamily: Ankyrin repeat
Family: Ankyrin repeat

Phyre2
1

d1n11a_
2

c1n11A_
3

c3utmA_
4

c3keaB_
5

d1k1aa_
6

c2fo1E_
7

d1s70b_
8

c3ljnA_
9

c2xaiD_
10

d2ajaa1
11

d2fo1e1
12

d1wdya_
13

c3eu9B_
14

d1uoha_
15

c3d9hA_
16

c3b7bB_
17

c2ajaA_
18

d1ixva_
19

c2f8xK_
20

d1iknd_
21



22



23



24



25



26



27



28



29



30



31



32



33



34



35



36



37



38



39



40



41



42



43



44



45



46



47



48



49



50



51



52



53



54



55



56



57



58



59



60



61



62



63



64



65



66



67



68



69



70



71



72



73



74



75



76






Detailed template information 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d1n11a_



100.0 36 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
2c1n11A_



100.0 36 PDB header:structural protein
Chain: A: PDB Molecule:ankyrin;
PDBTitle: d34 region of human ankyrin-r and linker
3c3utmA_



100.0 31 PDB header:transferase/signaling protein
Chain: A: PDB Molecule:tankyrase-1;
PDBTitle: crystal structure of a mouse tankyrase-axin complex
4c3keaB_



100.0 19 PDB header:viral protein
Chain: B: PDB Molecule:k1l;
PDBTitle: structure function studies of vaccinia virus host-range protein k12 reveal a novel ankyrin repeat interaction surface for k1s function
5d1k1aa_



100.0 100 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
6c2fo1E_



100.0 20 PDB header:gene regulation/signalling protein/dna
Chain: E: PDB Molecule:lin-12 protein;
PDBTitle: crystal structure of the csl-notch-mastermind ternary2 complex bound to dna
7d1s70b_



100.0 24 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
8c3ljnA_



100.0 21 PDB header:unknown function
Chain: A: PDB Molecule:hypothetical protein;
PDBTitle: ankyrin repeat protein from leishmania major
9c2xaiD_



100.0 20 PDB header:transcription
Chain: D: PDB Molecule:ankyrin repeat and socs box protein 9;
PDBTitle: crystal structure of ankyrin repeat and socs box-containing2 protein 9 (asb9) in complex with elonginb and elonginc
10d2ajaa1



100.0 13 Fold:alpha-alpha superhelix
Superfamily:Pseudo ankyrin repeat-like
Family:Pseudo ankyrin repeat
11d2fo1e1



100.0 19 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
12d1wdya_



100.0 24 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
13c3eu9B_



100.0 14 PDB header:protein binding, methyl-lysine-binding p
Chain: B: PDB Molecule:huntingtin-interacting protein 14;
PDBTitle: the ankyrin repeat domain of huntingtin interacting protein 14
14d1uoha_



100.0 19 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
15c3d9hA_



100.0 18 PDB header:structural protein, protein binding
Chain: A: PDB Molecule:cdna flj77766, highly similar to homo sapiens
PDBTitle: crystal structure of the splice variant of human asb92 (hasb9-2), an ankyrin repeat protein
16c3b7bB_



100.0 22 PDB header:transferase
Chain: B: PDB Molecule:euchromatic histone-lysine n-methyltransferase 1;
PDBTitle: euhmt1 (glp) ankyrin repeat domain (structure 1)
17c2ajaA_



100.0 13 PDB header:protein binding
Chain: A: PDB Molecule:ankyrin repeat family protein;
PDBTitle: x-ray structure of an ankyrin repeat family protein q5zsv02 from legionella pneumophila. northeast structural genomics3 consortium target lgr21.
18d1ixva_



100.0 21 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
19c2f8xK_



100.0 21 PDB header:transcription/dna
Chain: K: PDB Molecule:neurogenic locus notch homolog protein 1;
PDBTitle: crystal structure of activated notch, csl and maml on hes-12 promoter dna sequence
20d1iknd_



100.0 26 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
21c1sw6A_



not modelled 100.0 17 PDB header:transcription regulation
Chain: A: PDB Molecule:regulatory protein swi6;
PDBTitle: s. cerevisiae swi6 ankyrin-repeat fragment
22d1sw6a_



not modelled 100.0 17 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
23d1ot8a_



not modelled 100.0 23 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
24c3jxiA_



not modelled 100.0 20 PDB header:membrane protein
Chain: A: PDB Molecule:vanilloid receptor-related osmotically activated channel
PDBTitle: crystal structure of the chicken trpv4 ankyrin repeat domain
25d1oy3d_



not modelled 100.0 30 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
26c1oy3D_



not modelled 100.0 30 PDB header:dna binding protein
Chain: D: PDB Molecule:transcription factor inhibitor i-kappa-b-beta;
PDBTitle: crystal structure of an ikbbeta/nf-kb p65 homodimer complex
27c2vgeA_



not modelled 100.0 20 PDB header:transcription
Chain: A: PDB Molecule:rela-associated inhibitor;
PDBTitle: crystal structure of the c-terminal region of human iaspp
28c3hraA_



not modelled 100.0 16 PDB header:structural protein
Chain: A: PDB Molecule:ankyrin repeat family protein;
PDBTitle: crystal structure of ef0377 an ankyrin repeat protein
29c2f37B_



not modelled 100.0 20 PDB header:membrane protein
Chain: B: PDB Molecule:transient receptor potential cation channel
PDBTitle: crystal structure of the ankyrin repeat domain of human2 trpv2
30c3t8kB_



not modelled 100.0 15 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: the crystal structure of a functionally unknown protein lebu_0176 from2 leptotrichia buccalis c-1013-b
31c2rfaA_



not modelled 100.0 22 PDB header:membrane protein
Chain: A: PDB Molecule:transient receptor potential cation channel subfamily v
PDBTitle: crystal structure of the mouse trpv6 ankyrin repeat domain
32c3ui2A_



not modelled 99.9 31 PDB header:transport protein
Chain: A: PDB Molecule:signal recognition particle 43 kda protein, chloroplastic;
PDBTitle: crystal structure of the cpsrp54 tail bound to cpsrp43
33c2kbxA_



not modelled 99.9 24 PDB header:cell adhesion
Chain: A: PDB Molecule:integrin-linked protein kinase;
PDBTitle: solution structure of ilk-pinch complex
34c3ehrB_



not modelled 99.9 21 PDB header:signaling protein
Chain: B: PDB Molecule:osteoclast-stimulating factor 1;
PDBTitle: crystal structure of human osteoclast stimulating factor
35c2nyjA_



not modelled 99.9 14 PDB header:transport protein
Chain: A: PDB Molecule:transient receptor potential cation channel
PDBTitle: crystal structure of the ankyrin repeat domain of trpv1
36c1ycsB_



not modelled 99.9 19 PDB header:complex (anti-oncogene/ankyrin repeats)
Chain: B: PDB Molecule:53bp2;
PDBTitle: p53-53bp2 complex
37c3jueA_



not modelled 99.9 26 PDB header:protein transport/endocytosis
Chain: A: PDB Molecule:arfgap with coiled-coil, ank repeat and ph domain-
PDBTitle: crystal structure of arfgap and ank repeat domain of acap1
38c3twtD_



not modelled 99.9 31 PDB header:signaling protein/peptide
Chain: D: PDB Molecule:tankyrase-2;
PDBTitle: crystal structure of arc4 from human tankyrase 2 in complex with2 peptide from human mcl1 (chimeric peptide)
39c3deoA_



not modelled 99.9 30 PDB header:protein transport, membrane protein
Chain: A: PDB Molecule:signal recognition particle 43 kda protein;
PDBTitle: structural basis for specific substrate recognition by the2 chloroplast signal recognition particle protein cpsrp43
40d1dcqa1



not modelled 99.9 30 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
41c2b0oF_



not modelled 99.9 21 PDB header:metal binding protein
Chain: F: PDB Molecule:uplc1;
PDBTitle: crystal structure of uplc1 gap domain
42c2rfmB_



not modelled 99.9 26 PDB header:protein binding
Chain: B: PDB Molecule:putative ankyrin repeat protein tv1425;
PDBTitle: structure of a thermophilic ankyrin repeat protein
43d2a5ea_



not modelled 99.9 21 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
44c1ympB_



not modelled 99.9 30 PDB header:transcription
Chain: B: PDB Molecule:notch 1 protein;
PDBTitle: the crystal structure of a partial mouse notch-1 ankyrin2 domain: repeats 4 through 7 preserve an ankyrin fold
45c1dcqA_



not modelled 99.9 22 PDB header:metal binding protein
Chain: A: PDB Molecule:pyk2-associated protein beta;
PDBTitle: crystal structure of the arf-gap domain and ankyrin repeats2 of papbeta.
46d1blxb_



not modelled 99.9 22 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
47c1ympA_



not modelled 99.9 30 PDB header:transcription
Chain: A: PDB Molecule:notch 1 protein;
PDBTitle: the crystal structure of a partial mouse notch-1 ankyrin2 domain: repeats 4 through 7 preserve an ankyrin fold
48d1ycsb1



not modelled 99.9 27 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
49c3lvrE_



not modelled 99.9 26 PDB header:protein transport
Chain: E: PDB Molecule:arf-gap with sh3 domain, ank repeat and ph domain-
PDBTitle: the crystal structure of asap3 in complex with arf6 in transition2 state soaked with calcium
50d1awcb_



not modelled 99.9 23 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
51d1myoa_



not modelled 99.9 28 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
52c3c5rB_



not modelled 99.9 35 PDB header:protein binding
Chain: B: PDB Molecule:brca1-associated ring domain protein 1;
PDBTitle: crystal structure of the bard1 ankyrin repeat domain and its2 functional consequences
53d1ihba_



not modelled 99.9 22 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
54c2v5qC_



not modelled 99.9 38 PDB header:transferase
Chain: C: PDB Molecule:design ankyrin repeat protein;
PDBTitle: crystal structure of wild-type plk-1 kinase domain in2 complex with a selective darpin
55c3v30A_



not modelled 99.9 24 PDB header:protein binding
Chain: A: PDB Molecule:dna-binding protein rfxank;
PDBTitle: crystal structure of the peptide bound complex of the ankyrin repeat2 domains of human rfxank
56d1bd8a_



not modelled 99.9 18 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
57c2zgdA_



not modelled 99.8 26 PDB header:de novo protein
Chain: A: PDB Molecule:3 repeat synthetic ankyrin;
PDBTitle: asn-hydroxylation stabilises the ankyrin repeat domain fold
58c2l6bA_



not modelled 99.8 36 PDB header:de novo protein
Chain: A: PDB Molecule:nr1c;
PDBTitle: nrc consensus ankyrin repeat protein solution structure
59c2jabC_



not modelled 99.8 34 PDB header:de novo protein
Chain: C: PDB Molecule:h10-2-g3;
PDBTitle: a designed ankyrin repeat protein evolved to picomolar2 affinity to her2
60d1bi7b_



not modelled 99.8 26 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
61c2xenA_



not modelled 99.8 27 PDB header:de novo protein
Chain: A: PDB Molecule:ni1c mut4;
PDBTitle: structural determinants for improved thermal stability of2 designed ankyrin repeat proteins with a redesigned c-3 capping module.
62c1n0rA_



not modelled 99.7 42 PDB header:structural protein
Chain: A: PDB Molecule:4 ankyrin repeats;
PDBTitle: 4ank: a designed ankyrin repeat protein with four identical2 consensus repeats
63c1n0qB_



not modelled 99.7 37 PDB header:structural protein
Chain: B: PDB Molecule:3 ankyrin repeats;
PDBTitle: 3ank: a designed ankyrin repeat protein with three identical consensus2 repeats
64c2xumS_



not modelled 90.5 28 PDB header:oxidoreductase/peptide
Chain: S: PDB Molecule:asp-substrate peptide 2;
PDBTitle: factor inhibiting hif (fih) q239h mutant in complex with zn(ii), nog2 and asp-substrate peptide (20-mer)
65c2y0iS_



not modelled 48.0 42 PDB header:oxidoreductase/peptide
Chain: S: PDB Molecule:tankyrase-2;
PDBTitle: factor inhibiting hif-1 alpha in complex with tankyrase-2 (tnks2)2 fragment peptide (21-mer)
66c3ix1B_



not modelled 40.5 21 PDB header:biosynthetic protein
Chain: B: PDB Molecule:n-formyl-4-amino-5-aminomethyl-2-methylpyrimidine binding
PDBTitle: periplasmic n-formyl-4-amino-5-aminomethyl-2-methylpyrimidine binding2 protein from bacillus halodurans
67c3ih9A_



not modelled 38.4 16 PDB header:hydrolase
Chain: A: PDB Molecule:salt-tolerant glutaminase;
PDBTitle: crystal structure analysis of mglu in its tris form
68c3ix1A_



not modelled 37.0 21 PDB header:biosynthetic protein
Chain: A: PDB Molecule:n-formyl-4-amino-5-aminomethyl-2-methylpyrimidine binding
PDBTitle: periplasmic n-formyl-4-amino-5-aminomethyl-2-methylpyrimidine binding2 protein from bacillus halodurans
69c2x7pA_



not modelled 26.6 16 PDB header:unknown function
Chain: A: PDB Molecule:possible thiamine biosynthesis enzyme;
PDBTitle: the conserved candida albicans ca3427 gene product defines a new2 family of proteins exhibiting the generic periplasmic binding3 protein structural fold
70c3qslA_



not modelled 17.5 30 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative exported protein;
PDBTitle: structure of cae31940 from bordetella bronchiseptica rb50
71c3tqwA_



not modelled 16.5 18 PDB header:transport protein
Chain: A: PDB Molecule:methionine-binding protein;
PDBTitle: structure of a abc transporter, periplasmic substrate-binding protein2 from coxiella burnetii
72c3zrhA_



not modelled 10.2 20 PDB header:hydrolase
Chain: A: PDB Molecule:ubiquitin thioesterase zranb1;
PDBTitle: crystal structure of the lys29, lys33-linkage-specific trabid otu2 deubiquitinase domain reveals an ankyrin-repeat ubiquitin binding3 domain (ankubd)
73d2cwla1



not modelled 8.8 19 Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Manganese catalase (T-catalase)
74c3e4rA_



not modelled 8.3 16 PDB header:transport protein
Chain: A: PDB Molecule:nitrate transport protein;
PDBTitle: crystal structure of the alkanesulfonate binding protein2 (ssua) from the phytopathogenic bacteria xanthomonas3 axonopodis pv. citri bound to hepes
75c2x26A_



not modelled 6.4 9 PDB header:transport protein
Chain: A: PDB Molecule:periplasmic aliphatic sulphonates-binding protein;
PDBTitle: crystal structure of the periplasmic aliphatic sulphonate2 binding protein ssua from escherichia coli
76c3sviA_



not modelled 5.4 29 PDB header:signaling protein
Chain: A: PDB Molecule:type iii effector hopab2;
PDBTitle: structure of the pto-binding domain of hoppmal generated by limited2 thermolysin digestion

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite