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Job DescriptionP20749
Confidence99.94%DateTue Apr 3 15:06:46 BST 2012
Rank32Aligned Residues124
% Identity31%Templatec3ui2A_
PDB info PDB header:transport proteinChain: A: PDB Molecule:signal recognition particle 43 kda protein, chloroplastic; PDBTitle: crystal structure of the cpsrp54 tail bound to cpsrp43
Resolution3.18 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   132.......140.........150.........160.........170.........180.........190.........200.........210.
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Query Sequence  DEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHL
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Template Sequence  VSEYETPWWTAARKADEQALS. . . . QLLED. RDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRD. . . . . . . . .
Template Known Secondary structure  TTT
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BT
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TT


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   125....130.........140..... ....150 .........160.........170.........180.........190
 
   212.......220.........230.........240.........250.........260.........270.........280.........290.
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Query Sequence  ACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSM
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   292.......300.........310.........320.........330.........340.........350.........360...
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Query Sequence  VQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKAT
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Template Sequence  . . . . . . . . . . . . . . MRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQ
Template Known Secondary structure  ..............SSS


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   191........200.........210.........220.........230.........240........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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