Return to main results Retrieve Phyre Job Id

Job DescriptionP20749
Confidence100.00%DateTue Apr 3 15:06:46 BST 2012
Rank2Aligned Residues238
% Identity36%Templatec1n11A_
PDB info PDB header:structural proteinChain: A: PDB Molecule:ankyrin; PDBTitle: d34 region of human ankyrin-r and linker
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   136...140.........150.........160.........170.........180.........190.........200.........210.....
Predicted Secondary structure 




































Query SS confidence 















































































Query Sequence  DTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEH
Query Conservation   
 

 
   
       
   
   

        
 



 
   
    
  

  

        
 
 
  
   
Alig confidence 
















....


























































Template Conservation   



 

  
    
 .... 

  




  
  
 



 
   
   

  

  




  
  
 


  
   
Template Sequence  LTPLHVASFMGHLPIVK. . . . NLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARI
Template Known Secondary structure 

T
....TT

S

SSS



T
T

SS


TTS

Template Predicted Secondary structure 




....































Template SS confidence 















































































   405....410.........420. ........430.........440.........450.........460.........470.........480
 
   216...220.........230...
Predicted Secondary structure 









..............................................................
Query SS confidence 

















. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  RSPTCLRALLDSAAPGTL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation          
         ..............................................................
Alig confidence 

















..............................................................
Template Conservation 
       
                                                                       
Template Sequence  GHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDA
Template Known Secondary structure  T
T

TT


TT


T
TT

S



TTS

TT
TT
Template Predicted Secondary structure 












































































Template SS confidence 















































































   481........490.........500.........510.........520.........530.........540.........550.........560
 
  
Predicted Secondary structure  ................................................................................
Query SS confidence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ................................................................................
Template Conservation                                                                                  
Template Sequence  HPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLH
Template Known Secondary structure 
TT


SS


TT
GGGT

S



TT


TT
TT

TT


TT


Template Predicted Secondary structure 















































































Template SS confidence 















































































   561........570.........580.........590.........600.........610.........620.........630.........640
 
   234.....240.........250.........260.........270.........280.........290.....
Predicted Secondary structure  ..................























Query SS confidence  . . . . . . . . . . . . . . . . . .





























































Query Sequence  . . . . . . . . . . . . . . . . . . DLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLL
Query Conservation  ..................                                                 
          

Alig confidence  ..................





























































Template Conservation                                                                                  
Template Sequence  LAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFL
Template Known Secondary structure  TT
TTT

TT


TT


T
T

TT


SS


SS
S
Template Predicted Secondary structure 















































































Template SS confidence 















































































   641........650.........660.........670.........680.........690.........700.........710.........720
 
   296...300.........310.........320.........330.........340.........350.........360. ........370..
Predicted Secondary structure 

































...








Query SS confidence 

































































. . .










Query Sequence  LQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGK. . . ATRPASTSQPD
Query Conservation     
      
  
 
 

 

  
    
  

  




  
  
 


 

       


 
...           
Alig confidence 

































































...










Template Conservation            
  
 



 
   
    
  

  




  
  
 


  
   
   

 

    
         
Template Sequence  LQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDETSFVLHRM
Template Known Secondary structure  TT

TT


TTS

TT
TT

S



SSS

TT




SS




Template Predicted Secondary structure 










































Template SS confidence 















































































   721........730.........740.........750.........760.........770.........780.........790.........800
 
   373....
Predicted Secondary structure 




Query SS confidence 




Query Sequence  PSPDR
Query Conservation       
Alig confidence 




Template Conservation     

Template Sequence  SFPET
Template Known Secondary structure 




Template Predicted Secondary structure 




Template SS confidence 




   805....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions