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Job DescriptionP20749
Confidence99.94%DateTue Apr 3 15:06:46 BST 2012
Rank34Aligned Residues173
% Identity21%Templatec3ehrB_
PDB info PDB header:signaling proteinChain: B: PDB Molecule:osteoclast-stimulating factor 1; PDBTitle: crystal structure of human osteoclast stimulating factor
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   113......120.........130.........140.........150.........160..... ....170.........180......
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Query Sequence  MMCPMEHPLSADIAMATRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGREL. . . . . . DIYNNLRQTPLHLAVITTLPS
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Template Sequence  GQVKVFRALYTFEPRTPDELYIEEGDIIYITDXSDTNWWK. . . . GTSKGRTGLIPSNYVAEQAESIDNPLHEAAKRGNLS
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SS
B

SSTTB

B
TT


SSS....TTS
T
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   12.......20.........30.........40.........50. ........60.........70.........80.......
 
   187..190.........200.........210.........220.........230.........240.........250.........260......
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Query Sequence  VVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGA
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Template Sequence  WLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEXLFTQ. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TT

TT


TTS

TT
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   88.90.........100.........110.........120........
 
   267..270.........280.........290.........300.........310.........320.........330.........340......
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Query Sequence  DIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPL
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . PNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAF
Template Known Secondary structure  ...............................TT






TTS

T
T

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TTS

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   129130.........140.........150.........160.........170.......
 
   347..350.........
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Query Sequence  MVARSRRVIDILR
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Template Sequence  DXATNAACASLLK
Template Known Secondary structure 

S
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   178.180.........190
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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