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Job DescriptionP20749
Confidence99.95%DateTue Apr 3 15:06:46 BST 2012
Rank30Aligned Residues170
% Identity15%Templatec3t8kB_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:uncharacterized protein; PDBTitle: the crystal structure of a functionally unknown protein lebu_0176 from2 leptotrichia buccalis c-1013-b
Resolution1.77 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   134.....140.........150.........160...... ...170.........180.........190.........200.........210
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Query Sequence  DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELD. . . IYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAH
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Template Sequence  SEYRTVSAAAXLGTYEDFL. . . . ELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISXFLINKGADIKSRTKEGTTLFF
Template Known Secondary structure  GT
SSS
....SSS
TTTT
S
TT

TT


TT


T
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   2.......10.........20 .........30.........40.........50.........60.........70.......
 
   211........220.........230.........240.........250.........260.........270.........280.........290
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Query Sequence  LACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLS
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Template Sequence  PLFQGGGNDITGTT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . E
Template Known Secondary structure  S
TT
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   78.80.........90. .
 
   291........300.........310.........320. ........330.........340.........350.........360...
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Query Sequence  MVQLLLQHGANVNAQMYSGSSALHSASGRGL. . . . . . . LPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKAT
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Template Sequence  LCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEXIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKXXED
Template Known Secondary structure  TT

SSSTTTTTTGGGGG

S
GGGGTSTT


S


TTS

TT
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   93......100.........110.........120.........130.........140.........150.........160.........170..
 
   364.....370..
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Query Sequence  RPASTSQPD
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Template Sequence  YIKKYNLKE
Template Known Secondary structure  TT


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   173......180.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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