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Job DescriptionP20749
Confidence100.00%DateTue Apr 3 15:06:46 BST 2012
Rank9Aligned Residues221
% Identity20%Templatec2xaiD_
PDB info PDB header:transcriptionChain: D: PDB Molecule:ankyrin repeat and socs box protein 9; PDBTitle: crystal structure of ankyrin repeat and socs box-containing2 protein 9 (asb9) in complex with elonginb and elonginc
Resolution2.58 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   136...140.........150.........160.........170.........180.........190.........200.........210.....
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Query Sequence  DTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEH
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Template Sequence  WSPMHEAAIHGHQLSLR. . . . NLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVS
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T
....TT

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TT


T
TT

TT


TTS

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   37..40.........50... ......60.........70.........80.........90.........100.........110..
 
   216...220.........230... ......240.........250.........260.........
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Query Sequence  RSPTCLRALLDSAAPGTL. . . . . . . . . . . . . . . . . . . . . . . . . . DLEARNYDGLTALHVAVNTECQETVQLLLERGADID
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Template Sequence  GSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGAD
Template Known Secondary structure  T
TT

SS
S
TT

TT
TT

TT

BTTTB
TT
T

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   113......120.........130.........140.........150.........160.........170.........180.........190..
 
   270.........280.........290.........300.........310.........320.........330.........340.........
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Query Sequence  AVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVA
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Template Sequence  VNQGKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVPPES. . PLAQLFLEREGPPSLMQLCRLRIRKCF
Template Known Secondary structure  TT

BTTB
T
TT

TT


TTS

GGGGS
TT
..GGG
S


TS
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   193......200.........210.........220.........230.........240... ......250.........260.........270
 
   350.........360..
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Query Sequence  RSRRVIDILRGKA
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Template Sequence  GIQQHHKITKLVL
Template Known Secondary structure 
TT
GGGGGGSSS
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   271........280...
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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