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Job DescriptionP20749
Confidence99.90%DateTue Apr 3 15:06:46 BST 2012
Rank44Aligned Residues130
% Identity30%Templatec1ympB_
PDB info PDB header:transcriptionChain: B: PDB Molecule:notch 1 protein; PDBTitle: the crystal structure of a partial mouse notch-1 ankyrin2 domain: repeats 4 through 7 preserve an ankyrin fold
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   161........170.........180.........190.........200.........210.........220.........230.........240
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Query Sequence  GGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNY
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Template Sequence  RATDLDARMHDGTTPLILAARLALEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGA. . . . . . . . . . .
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   107..110.........120.........130.........140.........150.........160.........170.....
 
   241........250.........260.........270.........280.........290.........300.........310.........320
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Query Sequence  DGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRG
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . NKDMQNNKEETPLFLAAREG
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   176...180.........190.....
 
   321........330.........340.........350.........360.
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Query Sequence  LLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGK
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Template Sequence  SYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLL
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   196...200.........210.........220.........230......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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