Return to main results Retrieve Phyre Job Id

Job DescriptionP20749
Confidence99.86%DateTue Apr 3 15:06:46 BST 2012
Rank55Aligned Residues157
% Identity24%Templatec3v30A_
PDB info PDB header:protein bindingChain: A: PDB Molecule:dna-binding protein rfxank; PDBTitle: crystal structure of the peptide bound complex of the ankyrin repeat2 domains of human rfxank
Resolution1.57 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   138.140.........150.........160.... .....170.........180.........190.........200.........210......
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Query Sequence  PLHIAVVQGNLPAVHRLVNLFQQGGRE. LDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHR
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Template Sequence  SIHQLAAQGELDQLK. . . . EHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGG
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TT
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SGGGG


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TT
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   93......100....... ..110.........120.........130.........140.........150.........160........
 
   217..220.........230.........240.........250.........260.........270.........280.........290......
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Query Sequence  SPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLL
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Template Sequence  YTDIVGLLLER. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DVDINIYDWNGGTPLLYAVRGNHVKCVEALL
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   169170......... 180.........190.........200.........210
 
   297..300.........310.........320.........330......
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Query Sequence  QHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSS
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Template Sequence  ARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLF
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   211........220.........230.........240.........250
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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