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Job DescriptionP20749
Confidence99.95%DateTue Apr 3 15:06:46 BST 2012
Rank31Aligned Residues198
% Identity22%Templatec2rfaA_
PDB info PDB header:membrane proteinChain: A: PDB Molecule:transient receptor potential cation channel subfamily v PDBTitle: crystal structure of the mouse trpv6 ankyrin repeat domain
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   135....140.........150.........160.........170.........180.........190.........200.........210....
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Query Sequence  GDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACE
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Template Sequence  WESPLLLAAKENDVQALSKL. . . LKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTAL
Template Known Secondary structure  TT
TT
...TTT
S
TT


TTS

TT

GGGGG



STTTTT

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   45....50.........60.... .....70.........80.........90.........100.........110.........120.
 
   215....220......... 230.........240.........250.........260.........270.........280
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Query Sequence  HRSPTCLRALLDSAA. . . . . . . . . . . . . . PGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPL
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Template Sequence  HIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLH
Template Known Secondary structure  TT
TT

TT



SGGGS

TT
S



SST
TT

TT


TTS

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   122.......130.........140.........150.........160.........170.........180.........190.........200.
 
   281........290........ .300.........310.........320.........330.....
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Query Sequence  IHAVENNSLSMVQLLLQH. . . . . . . . . GANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADS
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Template Sequence  ILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKHI
Template Known Secondary structure  T
S
TT
S
SS

GGG


TTS

T

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   202.......210.........220.........230.........240.........250.........260.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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