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Job DescriptionP20749
Confidence100.00%DateTue Apr 3 15:06:46 BST 2012
Rank19Aligned Residues217
% Identity21%Templatec2f8xK_
PDB info PDB header:transcription/dnaChain: K: PDB Molecule:neurogenic locus notch homolog protein 1; PDBTitle: crystal structure of activated notch, csl and maml on hes-12 promoter dna sequence
Resolution3.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   137..140.........150.........160.........170.........180.........190.........200.........210......
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Query Sequence  TPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHR
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Template Sequence  TPLMIASCSAVISDFIYSLH. . . . . . . . . NQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSAD
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   1884.....1890.........1900... ......1910.........1920.........1930.........1940.........1950....
 
   217..220.........230.........240.........250.........260.........270.........280.........290......
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Query Sequence  SPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLL
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Template Sequence  AQGVFQILIRNRA. . . . TDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLL
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   1974.....1980...... ...1990.........2000.........2010.........2020.........2030.........2040.........
 
   297..300.........310.........320.........330.........340.........350.........360......
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Query Sequence  QHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKATRPA
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Template Sequence  KNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNL
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   2050.........2060.........2070.........2080.........2090.........2100.........2110.........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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