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Job DescriptionP20749
Confidence99.82%DateTue Apr 3 15:06:46 BST 2012
Rank59Aligned Residues125
% Identity34%Templatec2jabC_
PDB info PDB header:de novo proteinChain: C: PDB Molecule:h10-2-g3; PDBTitle: a designed ankyrin repeat protein evolved to picomolar2 affinity to her2
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   133......140.........150.........160.........170.........180.........190.........200.........210..
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Query Sequence  EDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLA
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Template Sequence  SDLGKKLLEAARAGQDDEVR. . . . ILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLA
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T
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TT


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T
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TT


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   12.......20.........30. ........40.........50.........60.........70.........80.......
 
   213......220.........230.........240.........250.........260.........270.........280.........290..
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Query Sequence  CEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMV
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Template Sequence  AFIGHLEIAEVLLKHGA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  T
TT
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   88.90.........100....
 
   293......300.........310.........320.........330..
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Query Sequence  QLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSG
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Template Sequence  . . . . . . . . DVNAQDKFGKTAFDISIGNGNEDLAEILQKLN
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TT


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TT

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   105....110.........120.........130......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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