For this study, homologues were defined as pairs of proteins with similar three-dimensional structures, in addition to having other feature suggesting divergence from a common ancestor, such as a common function, conservation of key residues, or unusual features such as left handed beta-alpha-beta supersecondary structures that are unlikely to have arisen twice by chance. Definitions of homologues were taken from SCOP. Any pair of proteins within the same superfamily classification was considered as a homology.
In this study, remote homologues were defined as pairs of homologous proteins having a pairwise sequence identity <=25% as caculated using structurally equivalent regions only.
The flat format STAMP file can be viewed by clicking on the file name; the superimposition of C-alpha coordinates by clicking on "View superimposition" (you may have to configure your browser to run RasMol when it finds a PDB file - you may also simply download the file and view it locally).
Identifiers correspond to protein databank (PDB) database codes, postfixed with a chain (where relevant) and with further post-fixing denoting a domain description (an explanation will be added at at a later date).
The pdb coordinates should all contains three chains. Chains "A" and "B" correspond to the two structures in the alignment, chain "Z" to the averaged coordinates, approximately indicating the regions of structural similarity. If you use Rasmol, colour by chain should give a meaningful picture. Within the averaged coordinates, residues are named according to whether or not they are identical in the two structures: either they are named as the identical residue or UNK if the residues are different. If you are interested in seeing which positions have the same amino acid, then if you turn everything off ("wireframe off", "backbone off", etc.), and then do "select **Z" followed by "colour shapely", you will see residues colour either magenta (UNK = not-identical) or other colours indicating the conserved amino acid type.
1abe NLKLGFLVKQPEEPWFQTEWKFADKAGKDL GFEVIKIAV PDGEKTLNAIDSLAA
1gca aDTRIGVTIYKYDDNFMSVVRKAIEKDGKSApDVQLLMNDSqNDQSKQNDQIDVLLA
1abe_dssp -EEEEEEES-TTSHHHHHHHHHHHHHHHHH TEEEEEEE- -SHHHHHHHHHHHHH
1gca_dssp --EEEEEEES-TT-HHHHHHHHHHHHHHHTStTEEEEEEE-tT-HHHHHHHHHHHHH
Similar -111111111111111111111111111111-111111111-111111111111111
1abe SGAKGFVICTPDPKLGSAIVAKARGYDMKVIAVDDQFvnakgkpMD tvPLVMM
1gca KGVKALAINLVDPAAAGTVIEKARGQNVPVVFFNKEPs rkALdsydkaYYVGT
1abe_dssp HT--EEEEE-S-GGGHHHHHHHHHHTT-EEEEESS--b-tts-b-T ts-EEEE
1gca_dssp TT-SEEEE--SSGGGHHHHHHHHHHTT--EEEESS--- hhHHht-tteEEEE-
Similar 11111111111111111111111111111111111110----0011----0111111
1abe AATKIGERQGQELYKEMQKR GWDvK esAVMAI TANELDTARRRTTGSMDALK
1gca DSKESGVIQGDLIAKHWQANqGWDlNkdgkiQYVLLkGEPGHPDAEARTTYVVKELN
1abe_dssp -HHHHHHHHHHHHHHHHHHH T--gG geEEEEE E-TTSHHHHHHHHHHHHHHH
1gca_dssp -HHHHHHHHHHHHHHHHHH-gGG-tT-ssseEEEEEe-STT-HHHHHHHHHHHHHHH
Similar 11111111111111111111-11101---0011111-11111111111111111111
1abe AAGFPekqiYQVPtkSNDIPGAFDAANSMLV qHPEvkHWLIVGMNDSTVLGGVRA
1gca DKGIQteqlALDT aMWDTAQAKDKMDAWLSgpnANK IEVVIANNDAMAMGAVEA
1abe_dssp HTT--gggeEEEE-sSSSHHHHHHHHHHHHT t-TT-sEEEEE-SSHHHHHHHHHH
1gca_dssp HTT--eeeeEEEE -TT-HHHHHHHHHHHHTsttGGG --EEEESSHHHHHHHHHH
Similar 1111100001111-01111111111111111--0111--111111111111111111
1abe TEGQGfkaadIIGIGINGvdAVSELS kaqAtgFYGSLLPSPDVHGYKSSEMLYNWV
1gca LKAHNk ssIPVFGVDA LPEALAlvksG aMAGTVLNDANNQAKATFDLAKNLA
1abe_dssp HHHTT--gggEEEEEESSggGHHHHT sss--sEEEEEE--HHHHHHHHHHHHHHHH
1gca_dssp HHHTT- ttS-EE-SB- -HHHHHhhhhT sS-BEEE--HHHHHHHHHHHHHHHH
Similar 111110--0011111111--111111-0001-0111111111111111111111111
1abe aKDVE ppKFTEVtDVVLITrdnfkeELekkglgg
1gca EGKGaadgtswkienKIVRV PYVGVDkdn lsEFtq
1abe_dssp hH--- --SEEEE---EEEEttthhhHHhhtt---
1gca_dssp TTS-tttts----btTEEE- --EEE-ttt ggGTs-
Similar -1111---------0011111-111111000-001100-----
1aboa NLFVALYDFVASGdNTLSITKGEKLRVlg ynhnGEWCEAQ
1pht aegYQYRALYDYKKEReEDIDLHLGDILTVnkgslvalgfsdgqearpeeIGWLNGY
1aboa_dssp -EEEESS-B---StTB--B-TT-EEEEee e-ttSSEEEEE
1pht_dssp -eeEEEEE-S-B--SStTB--B-TT-EEEEehhhhhttt--ttggg-hhhH-EEEEE
Similar ---11111111111110111111111111100--------------00001111111
1aboa TKNGQGWVPSNYITPVN
1pht neTTGERGDFPGTYVEYIGrkkisp
1aboa_dssp ETTEEEEEEGGGEEE--
1pht_dssp etTTTEEEEEEGGGEEEEEeee---
Similar --11111111111111111------
1add tpafnkpKVELHVHldgaikpetilyfgkkrgialpadtveelrniigm
1pta rintvrgpitiseagFTLTHEHicg
1add_dssp --s--s-EEEEEEEgggs--hhhhhhhhhhht---s-sshhhhhhhhs-
1pta_dssp -eeetteee-hhhh-SEEEEE--s-
Similar --------00000001111111000--------------------------------
1add dkplslpgflakfdyympviAGCreai kriayeFveMKAK EGVVYVEV
1pta ssaGFLrawpeffgsrkalaekAvrGLRRaraAGVRTIVD
1add_dssp ss---hhhhttggggthhhhTT-hhhh hhhhhhHhhHHHH TTEEEEEE
1pta_dssp tttTHHhh-hhhh--hhhhhhhHhhHHHHhhhHT--EEEE
Similar -----------------0001110000------0000001001111---11111111
1add RYSPHLlanskvdpmpwnqtegdvtpddvvdlvNQGLQEGEQAFGIKVRSILCCMRH
1pta VSTFDIg rdVSLLAEVSRAADVHIVAATGLWFD
1add_dssp EE-SGGg-sss-ss-ggg----s--hhhhhhhhHHHHHHHHHHH--EEEEEEEEETT
1pta_dssp ---GGGt --HHHHHHHHHHHT-EEE-EEEE-SS
Similar 1111110------------------------00111111111111111111111111
1add QpswS levLELCKKYNq kTVVAMDLAgdetiegssLFPGHVEAYE
1pta PplsMrlrsveelTQFFLREIqygiedtgiRAGIIKVAtt gkATPFQELVLK
1add_dssp -tttH hhhHHHHHHTBt tTEEEEEEEs-ttsttggG-HHHHHHHH
1pta_dssp --hhHht--hhhhHHHHHHHHht-bttttb---EEEE--- ss--HHHHHHHH
Similar 10001-----000111111110-------01111111100-----001111111111
1add GAVK nGIHRTVHagevgSpEVVREAVDIl kteRVGh gYHTIEdea
1pta AAARaslatGVPVTTH taasQ RDGEQQAAIfeseglspsrvCIGhsdDTDDL s
1add_dssp HHHH hT-EEEEEessss-hHHHHHHHHTt --sEEEe -GGGGGshh
1pta_dssp HHHHhhhhh---EEEE --ssT THHHHHHHHhhhht--gggeEEEessS-S-H h
Similar 1111----01111111-00001-1111111110-------0001110-011111--0
1add LYNRLLKENMHFEVcpwssylt gawdpktthAVVRFKND kANYSLNTd
1pta YLTALAARGYLIGLdhiphsaiallgirswqtralLIKALIDQgymKQILVSNdwlf
1add_dssp HHHHHHHTT-EEEE-hhhhhht sss-tts--HHHHHHHT t-EEEE--b
1pta_dssp HHHHHHHTT-EEEE----------s----hhhhhhHHHHHHHTttgGGEEE-Hhhhh
Similar 1111111111111100000000----00000000011111111--011111110---
1add dpliFKSTLD TDYQMTKkdMGFTEEEFKRL NINAAKsSFL
1pta gfssyvtnimdvmdrvNPDGMAfiplRVIPFLR eKGVPQETLAGItVTNPAR FLS
1add_dssp -hhhHT--HH HHHHHHHhtTT--HHHHHHH HHHHHHtS--
1pta_dssp ss-hhhhttss-sss--TTGGGhhhhHHHHHHH hTT--HHHHHHHhTHHHHH HHS
Similar ------------0000111111----1111111-011111111111-111111-111
1add Peeekkellerlyrey
1pta Pt
1add_dssp -hhhhhhhhhhhhhht
1pta_dssp --
Similar 10--------------
1ahtlh eadcglrplfekksledkterellesyii vEGSD aeigmSPWQVMLFRK
1arb gvsgsCNIDvvcpegdgrrdiIRAVGAYSKS
1ahtlh_dss --stt--tttgggt---sshhhhhhh--- bS-EE --tts-TTEEEEEET
1arb_dssp ----tT-EEttsgggtt-ttgGGGEEEEEET
Similar --------------------------000-01111-------000001111111111
1ahtlh spQELLCGASLI sDRWVLTAAHCLlyppwdknfTENDLLVRIGKh
1arb GTLACTGSLVnntandrKMYFLTAHHCGmg tasTAASIVVYWNYqnstcra
1ahtlh_dss ttTEEEEEEEE- sSSEEEE-GGGTeegggtee--GGGEEEEES--
1arb_dssp TEEEEEEEEB--tt-----EEEEEGGGS-- shhHHHT-EEEES---ss---
Similar --1111111111------01111111111100----000111111111110------
1ahtlh srtRYernieKISMLEKIYIhprynwrenlDRDIALMKLKKPVAfsdy
1arb pntpasgangdgSM sQTQSGSTVKAt yaTSDFTLLELNNAANpafn
1ahtlh_dss bssS--ttt-EEE-EEEEEE-tt-btttt-BT--EEEEESS-----ss
1arb_dssp ttsggggs------ --EEE-EEEEEe etTTTEEEEEESS---ggg-
Similar ---------00011----011111111110-------00111111111111110000
1ahtlh IHPVCLPdretAAsllqagyKGRVTGWGnlketgqpsVLQVVN LPIVErpvckdst
1arb LFWAGWD rRDq nypGAIAIHHPn vaEKRISNsTSPTSfv aw
1ahtlh_dss ----B---hhhHHhh--tt-EEEEEES--ss-----sB-EEEE EEB--hhhhhtt-
1arb_dssp -EEB-EE --S- --s-EEEEE-Gg g-S-EEEEe-S--Eee -t
Similar 1111111---0110---000111111110------00111111-1111100----00
1ahtlh riRiTDNMFCAgykpdegkrGDACEGDSGGPFVMkspfnnrWYQMGIVSWGegc
1arb ggGaGTTHLNVqw qpsgGVTEPGSSGSPIYS peKRVLGQLHGGpsscsa
1ahtlh_dss ss---TTEEEE---ttss---B--TTTTT-EEEEe-ttt--EEEEEEEEE-sss
1arb_dssp tsSs-SSEEEEe- -tts----TT-TT-EEE- ttS-EEEEEEE-s--tt-
Similar 0011111111100---000011111111111111-----001111111111000---
1ahtlh drdgkYGFYTHVFRLK kwIQKVidqf
1arb tgtnrSDQYGRVFTSWtgggaaasrLSDWldpastgaqfidgld
1ahtlh_dss s-tt--EEEEETGGGH hhHHHHhhhh
1arb_dssp -gggsEEEEEEHHHHHhttssggg-SHHHh-tt----see--ee
Similar 0000011111111111-------0011110000-----------
1amg.1 dqagkspnavryhggdEIILQGFHWNVVrEApnDWYNILRQQAATIAADGFSAIWMP 1amy.1 QVLFQGFNWESW KHngGWYNFLMGKVDDIAAAGITHVWLP 1amg.1_dss ------tt----ggg---EEE---TTHHhHSttTHHHHHHHHHHHHHHHT-SEEEE- 1amy.1_dss --EEE---TTGG G-tt-HHHHHHTTHHHHHHTT--EEEE- Similar ----------------111111111111-1100111111111111111111111111 1amg.1 VPWRDFsswsdgsksggGEGYFWHD FNKN GRYGSDAQLRQAASALGGAGVKVLYD 1amy.1 PASQSV aEQGYMPGRlYDLDaSKYGNKAQLKSLIGALHGKGVKAIAD 1amg.1_dss --S-----b-sss--b--SSTT--- S--- SSS--HHHHHHHHHHHHHTT-EEEEE 1amy.1_dss --S-BS sTTSSSBSStT-GGg-TT--HHHHHHHHHHHHHTT-EEEEE Similar 111111----------011111111-1111-11111111111111111111111111 1amg.1 VVPNHMNrgy pdkeiNLPagqGFWrndCAdpg nypndCDDG 1amy.1 IVINHRTaehkdgrgiycifeggtpdarlDWG pHMI cRDdrpyadgtgnPDTG 1amg.1_dss E-TTB--tt- ss-s----sssSSBgggS---s ss-btTBSS 1amy.1_dss E--SB---see-tts-eee---ssss-tt--- gGGB -TT-ttt--s-s---SS Similar 1111111000--------------00000111--0111--011000--000001111 1amg.1 DRFIggdADLNTGHPQVYGMFRDEFTNLRSQYGAGGFRFDFVRGYAPERVNSWMTDS 1amy.1 ADFG aaPDIDHLNLRVQKELVEWLNWLKADIGFDGWRFDFAKGYSADVAKIYIDRS 1amg.1_dss --STtstTBB-TTSHHHHHHHHHHHHHHHHHHTEEEEEES-GGGS-HHHHHHHHHHH 1amy.1_dss ---S ss-BB-TTSHHHHHHHHHHHHHHHHTT---EEEETTGGGS-HHHHHHHHHHH Similar 1111-0011111111111111111111111111111111111111111111111111 1amg.1 AdnSFCVGELWKgpseyp nwdwrntaSWQQIIKDWSDRA kCPVFDFALKERM 1amy.1 E pSFAVAEIWTslayggdgkpnlnqdQHRQELVNWVDKVggkgpATTFDFTTKGIL 1amg.1_dss -ttS-EEE-----gggs- ttsggggs-HHHHHHHHHHHH tS-EE-HHHHHHH 1amy.1_dss - -S-EEE-------b-ttssb-s--hHHHHHHHHHHHHHhttssEEEE-HHHHHHH Similar 1-0111111111000000-000000001111111111111----0111111111111 1amg.1 Qn gsIADW kHGLNgnpdprwREVAVTFVDNHDTGyspgqngGQHHWAL 1amy.1 NvavegeLWRLrgtdgkaPGMIg wwPAKAVTFVDNHDTG sTQHMWPF 1amg.1_dss Hh s-SGGG gGSGGg-sshhhHTTEEE-S--TTTS--sssttS--SS-- 1amy.1_dss Hhhttt-GGGGs-ttss-SSGGg t-GGGEEE-S--TTTS tTT-SS-- Similar 10---001111------011110----0011111111111111------01111111 1amg.1 QDGLIRQAYAYILTSPGTPVVYWDHMYDWGYGDFIRQLIQVRRAAG 1amy.1 PSDRVMQGYAYILTHPGTPCIFYDHFFDWGLKEEIDRLVSVRTRHG 1amg.1_dss -GGGHHHHHHHHHHSSSEEEEEHHHHHTSS-HHHHHHHHHHHHHHT 1amy.1_dss -GGGHHHHHHHHHHSSSEEEEEHHHHHHSS-HHHHHHHHHHHHHTT Similar 1111111111111111111111111111111111111111111111
1amp mppitqqatvtawlpqvdASQITGTISsLESftnrfytttsgaqaSDWIASEWQALS
1lcpa.1 fasgQNLARRLME TPAn emtPTKFAEIVEENL
1amp_dssp ------hhhhhhhggg--HHHHHHHHHhHHTss---ttshhhhhhHHHHHHHHHHHH
1lcpa.1_ds hhhhHHHHHHHHH S-Tt ts-HHHHHHHHHHHH
Similar --------------0001111111111-1110----------000111111111111
1amp ASLPNASVKQVsh sgynQKSVVMTI tGSeapDEWIVIG
1lcpa.1 kSASIKTDVFIRpkswieeqemgsflsvakgseepPVFLEIHYkgSPnasEPPLVFV
1amp_dssp TTSTTEEEEEE-- tts---EEEEEE --SseeEEEEEEE
1lcpa.1_ds hHH-SSEEEEEEehhhhhhtt-hhhhhhhttsss--EEEEEEEe-SSsttS--EEEE
Similar -1111111111100-----------------000011111111-0110001111111
1amp GH LDSTIGShtne qsvapGADdDASGIAAVTEVIRVLSENNfqpkRSIAFMAYA
1lcpa.1 GKgITFDSGGisikaaanmdlMRA DMGGAATICSAIVSAAKLDl pINIVGLAPL
1amp_dssp EE ----SSTt--t t-----TTtTHHHHHHHHHHHHHHHHTT---sEEEEEEEES
1lcpa.1_ds E-eEEEE--Tts---sttgggGGG TTHHHHHHHHHHHHHHHHT- sSEEEEEEEE
Similar 11-11111110000--00000111-11111111111111111110--0111111111
1amp ae evgLRGSQDLANQYKsegKNVVSALQL
1lcpa.1 cenmpsgkankpgdvvrarngktiqvdntdaegRLILADALCYAH tFNPKVIINA
1amp_dssp -g ggtSHHHHHHHHHHHhtt-EEEEEEE-
1lcpa.1_ds eee--stts--tteeee-tts-eeees-tt--hHHHHHHHHHHHG gG--S-EEEE
Similar 00----------------------------000111111111111--0111111111
1amp Dmtny kgsaqDVVFitdytDSNFTQYLTQLMdeylpSLTYGFD
1lcpa.1 AtltgamdialgsgATGVf tnSSWLWNKLFEASi etGDRVWRMplfehytrqv
1amp_dssp ---s- --sssSEEEe-sss-HHHHHHHHHHHhhh-tTS-EEEE
1lcpa.1_ds E---hhhhhhhtts-EEEe es-HHHHHHHHHHHh hhS--EEE----hhhhhhh
Similar 10000----0000011110--001111111111110--001111111----------
1amp tcGYacsdhaswhnAG yPAAMPfeskfndynprihttqd
1lcpa.1 idcqladvnnigkyrsagaCTaaa flkefVThpKWAHLdiagvmtnkd
1amp_dssp --SS--sthhhhhhTT --EE-Eess-gggs-ttttstt-
1lcpa.1_ds h--sssseess-ssstthhHHhhh hhhtt---sSEEEEe-gggseess
Similar -----------------0011000--0000011-1111110000000000-------
1amp tlansdptgshakKFTQLGLAYAIEMGsat
1lcpa.1 evpylrkgmagRPTRTLIEFLFRFS
1amp_dssp -gggs-tt-hhhhHHHHHHHHHHHHHHs--
1lcpa.1_ds sstts-see--TTHHHHHHHHHHHH
Similar --0000000000011111111111111---
1art mfenitaapadpilgladLFRa derpgkiNLGIgvykde
1tpla mnypaepfriksvetvsmiprderlkkmqeagynTFLlnskdi yiDLLTd
1art_dssp --tt-------tthhhhhHHHh ---tt-eE--S-----t
1tpla_dssp --s---seeeeeeee-----hhhhhhhhhhttt-GGGs-ggg- seE-S-s
Similar ----------------0000000000000000001111--000--0011110-----
1art tgktPVLTSVKKAEQyllenettKNYLgidgiPEFGRCTQELLfgkgsalindkrAR
1tpla sgtnAMSDKQWAGMMm gdEAYAgsenfYHLERTVQELF gfKH
1art_dssp ts-----HHHHHHHHhhhhh--------tt--HHHHHHHHHHHh-tt-hhhhtt-EE
1tpla_dssp ss---EEHHHHHHHTt ----SSs-hhhHHHHHHHHHHH --SE
Similar 0000111111111110-----0011110000011111111111----------0011
1art TAQTPGGTGALRVAADFLakntsvkRVWVsnpswpnhksvfnsaGLEVRE YAYYDA
1tpla IVPTHQGRGAENLLSQLAik pgqYVAGnm yknGAVFVDiVRDEAH
1art_dssp EEEESHHHHHHHHHHHHHhhhss--EEEEees--thhhhhhhhtT-EEEE EE-EET
1tpla_dssp EEEESSHHHHHHHHHHHH-- tt-EEEEs- ---SSEEEE-B-TTSS
Similar 11111111111111111100--000111100----------000111111-111111
1art eNHtl dfdaLINSLNE aQA GDVVLFHgCCHNP tGIDPTLEQWQTLAQ
1tpla dagLNiafkgdiDLKKLQKlidekGAenIAYICLA VTVNLagGQPVSMANMRAVRE
1art_dssp tTTee -hhhHHHHHTT --T T-EEEEEsSS-TT t-----HHHHHHHHH
1tpla_dssp -ss---tttt-b-HHHHHHhhhhh-GggEEEEEEE SSB-Stt-B---HHHHHHHHH
Similar --01100-00001111111----011--1111111-11111-011111111111111
1art LSVEKGWLPLFDFAYQGFA rgLEEDAEGLRAfaamhkelIVAS
1tpla LTAAHGIKVFYDATRCVENayfikeqeqgfenksiAEIVHEMFSY adGCTM
1art_dssp HHHHHT-EEEEEE--TTSS s-HHHHTHHHHHhhhh-s-eEEEE
1tpla_dssp HHHHTT--EEEE-TTHHHHhhhhhhhstt-tts-hHHHHHHHHHT ssEEEE
Similar 1111111111111111111--------------001111111111------001111
1art SYSKNFGLynerVGACTLVaadsetvDRAFSQMKAAIRANYs npPAHGASVV
1tpla SGKKDCLVn iGGFLCMN dDEMFSSAKELVVVYEgmpsygglAGRDMEAM
1art_dssp E-TTTTT-ggg--EEEEEE-sshhhhHHHHHHHHHHHHTTTs s--HHHHHHH
1tpla_dssp ETTTTT--s s-EEEEE- -HHHHHHHHHHHHHHHss--sss--HHHHHHH
Similar 111111110--01111111------01111111111111110-----0011111111
1art Atilsndalraiw eqELTDMRQRIQRMRQLFVntlqEKGAnrdfsFiikqnGMFS
1tpla Aig lreamqyeYIEHRVKQVRYLGDKLK AAGVp ivePv gGHAV
1art_dssp Hhhht-hhhhhhh hhHHHHHHHHHHHHHHHHHhhhhHTT-ss--gGggg--SSEE
1tpla_dssp Hhh hhhtt-hhHHHHHHHHHHHHHHHHH TTT-- b-sS- -SSEE
Similar 100------0000--0011111111111111111----11110-00010---01111
1art fSglt keqvlRLrEEF gvYAVa sgRVNVa gm
1tpla fLdarrfcehltqdefPA QSLaasiyvetgvrsMERgikletvRLTIprrvytyah
1art_dssp e---- hhhhhHHhHHH -eE-Bt ttEEEGg g-
1tpla_dssp eEehhhhttts-ggg-HH HHHhhhhhhhhsee-EE------eeEEE--tts--hhh
Similar 11000------0000011-111----------001110----0011110------00
1art tPDNMAPLCEAivaVl
1tpla mDVVADGIIKLyqhKedirglkfiyfftarfdy
1art_dssp -TTTHHHHHHHhhtT-
1tpla_dssp hHHHHHHHHHHhttGgg---ee-----s---ee
Similar 0111111111100010-----------------
1bara PKLLYCsNGGYFLRILpDGTVDGTK dRSDqhIQLQLAAE sigE
1i1b vrslNCTLRD SQQKSLVMSgPYELKALHlqgqdMEQq VVFSMSFVqgeesndkiP
1bara_dssp -EEEEEtTTS-EEEE-tTSBEEEES -TT-stT-EEEE-S sttE
1i1b_dssp -eeeEEEEEE TT--EEEE-sTT-EEEE---sggGGGs --EEEEE-ss---sseeE
Similar ----111111-111111111011111111----01110-11111111------0001
1bara VYIKSTETGQFLAMD tDGLLYGSQ tpNEECLFLERLEeNGYNTYI
1i1b VALGLKEKNLYLSCVlkddKPTLQLESvdpknypkkkmEKRFVFNKIEI NNKLEFE
1bara_dssp EEEEESSS--EEEE- tT--EEEES s--GGGEEEEEE-sSS-EEEE
1i1b_dssp EEEEETTSSEEEEEEesssSEEEEEEE--ttt-s-ss--GGGEEEEEEE TTEEEEE
Similar 111111111111111---011111111---------0011111111111-1111111
1bara SKKhaeKHWFVGLKKng rskLGPrtHFg qkAILFLPLP
1i1b SAQ fPNWYISTSQaenmpvFLG gTKggqdITDFTMQFvs
1bara_dssp EGGgggGT-B--B-Tts bb--GGg--Tt -gGG-EEEEE
1i1b_dssp ESS sTT-EEEB-Ssttee-EEE s--ssssB--EEEEE--
Similar 111--011111111100-000111-0110-0011111111--
1bbpa nvyhdgacpevkpvdnfdwsNYHGKWWevakyp nsvekygKC
1cbia pNFAGTWKmrssenfdellkalgvnamlrkvavaaaSK
1bbpa_dssp -eeeess-------s---ggG--EEEEeeee-- -stttt-EE
1cbia_dssp --S-EEEEeeeeeshhhhhhhtt--hhhhhhhhhhtTS
Similar -------------------01111111000000---------------000000011
1bbpa GWAEYTPEGKSVKVSNYhvihgkeYFIEGTAYPvgdskigkiYHKlty ggvtkeNV
1cbia PHVEIRQDGDQFYIKTS ttvRTTEINFKV geGFEeetvdgrkcrSL
1bbpa_dssp EEEEEEE-SS-EEEEEEeeetteeEEEEEEEEEss-ttsseeEEEeee tteeeeEE
1cbia_dssp -EEEEEEETTEEEEEEE -ss-EEEEEEET ts-EEee-tts-eeeEE
Similar 11111111111111111----000111111111-------00111000-00000011
1bbpa FNVlstdnknyIiGYYCKYdedkkGHQDFVWvLsrskvltgeaktavenyligspvv
1cbia PTWe nenkIhCTQTLLe gDGPKTYWtRelande liltfgad
1bbpa_dssp EEEeee-ssseEeEEEEEEettttEEEEEEEeEessss--hhhhhhhhhhhhh-ss-
1cbia_dssp EEEe etteEeEEEEESs s----EEEeEeeette eeeeeeet
Similar 1110---0000101111110---0111111101000000----------00000000
1bbpa dsqKLVYsdfseaackv
1cbia dVVCTriyvr
1bbpa_dssp -ggG-EE----hhhh--
1cbia_dssp tEEEEeeeee
Similar --0111100000-----
1bco.1 ehlDamQWINGDGYLhnvfvrwfngdviRPKTWFWQDVKTRKiLGWRCDVSENIDSI
1itg dcS pGIWQLDCTH leGKVILVAVHVASGY IEAEVIPAETGQET
1bco.1_dss ----ttTEEEEEEEE-sb-ee-tts-ee--EEEEEEETTT--eEEEEEESS--HHHH
1itg_dssp --- tTEEEEEEEE etTEEEEEEEETTTTE EEEEEESS--HHHH
Similar -001-0111111111-----------0011111111111111-11111111111111
1bco.1 RLSFMDVVTRygipedfHITIdntrgaankwltggapnryrfkvkeddPKGLFLLMG
1itg AYFLLKLAGRw pvkTVHTdngsn ftsttVKAACWWAG
1bco.1_dss HHHHHHHHHHh-eess-EEE---ttstttttts---ttttbs-b----HHHHHHHHT
1itg_dssp HHHHHHHHHHs ---EEE-s-ggg g-shhHHHHHHHHT
Similar 11111111110---000111100000-----------------00000111111111
1bco.1 AKmhwtsvvagkgwgqakpverafgVGGLEEYVDK hPAlagaytgpygdravdaeL
1itg IKqe fgmNKELKKIIGQvrDQ aeH
1bco.1_dss -Eee-sss-tt-----ss-ssgggsGGGGGGTTTT -GGgtttb----ttt-eehhH
1itg_dssp -Ees ---HHHHHHHHHHhtTT -sS
Similar 1100------------------0001111111111-011---------------001
1bco.1 FLKTLAEGVAMFNARTGretemcggKLSFDDVFEREYARTivrk
1itg LKTAVQMAVFIHNKKRKgg igGYSAGERIVDIIATDi
1bco.1_dss HHHHHHHHHHHHHH-----stttttT--HHHHHHHHHTTS-ee-
1itg_dssp HHHHHHHHHHHHHH---ss tt---HHHHHHHHHHTT-
Similar 1111111111111111100----001111111111111110---
1bet gefsvCDSVSVWVGdkttatdikgkevtvlaevninnsvfrQYFFETK
2tgi aldaaycfrnvqdnCCLRPLYIDfkrdl gwkwihepKGYNANF
1bet_dssp ----sS-EEEEEES---eeebtts-eeee-seeeetteeee--EEEEE
2tgi_dssp --shhhhtt---sbSEEE--EEEhhhhh --tteee-SEEE--E
Similar ---------0000011111111100000--------------000000001111111
1bet CRasNPvesgcrgidskhwN sYCT TTHTFVKALTtdekq
2tgi CA gACpyl wssdtqHsrvlslyntinpeasaspCCVsQDLEPLTILYyigkt
1bet_dssp ES-s-Sbttbstt--ttteE eEEE EEEEEEEEEEe-ss-
2tgi_dssp EE -B--tt ssb-shHhhhhhhhhhh-ggg-----EEe-SEEEEEEEEeette
Similar 11-011000----0000001-----------------0111-111111111100000
1bet aAWRF irIDTACVCvlsrk
2tgi pKIEQlsnmIVKSCKC
1bet_dssp eEEEE eeEEEEEEEeeee-
2tgi_dssp eEEEEeeeeEE--EEE
Similar 01111--001111111-----
1bgla.1 itdslavvlqrrdwenpgvtqlnrlaahppfaswrnseeartdrps qQLRSL NG 1dlc.1 ffnmidskKITQLpLV 1bgla.1_ds -tt-hhhhhht-ggg-tt-sees-----s----bsshhhhhtt--- tTEEE- -E 1dlc.1_dss tt-ee-ssSEEEEeGG Similar -----------------------------------------00000--011111-11 1bgla.1 E wRFAWfpapeavpeswlecdlpeadtvvvPSNwqmhgydapiytnvtypitvnpp 1dlc.1 KayKLQSgasvva gprftggdIIQ 1bgla.1_ds E eEEEEessgggs-ggggts--tt-eeeeeS--ggggtss--eeesss-ss---tt 1dlc.1_dss G-sEE-Tt-eee- --sssss-EEE Similar 1-01111000000----------00000000111----------------------- 1bgla.1 fvptenPTGCYSLTFNVDeswLQeGQTRIIFDGv nSAFHLWCNGRWVGYGQDSr 1dlc.1 cteNGSAATIYVTPD vSYsQKYRARIHYastsqITFTLSLDGAPFNQYYFDk 1bgla.1_ds ---s---EEEEEEEE---hhhHHsSEEEEEES-- bSEEEEEETTEEEEEEE-Tt 1dlc.1_dss e-sSEEEEEEE-EES -SS--EEEEEEEEeess-EEEEEEETTEEEEEEEE-- Similar ---000111111111111--01101111111110---01111111111111111110 1bgla.1 l psEFDlSAFLrageNRLAVMVlrwsdgsyledqdmwrmSGI 1dlc.1 tinkgdtltynsfnlasfSTP FELS gNNLQIGVtgl sagdKVY 1bgla.1_ds s -eEEE-TTT--ss-EEEEEEEes--gggggb--seee--B- 1dlc.1_dss ---tt----ggg-eeee-SS- EE-- -SEEEEEEe-- -tt--EE Similar 0---------------00111-1111---01111111000----------0000111 1bgla.1 FRDVSLLHkp 1dlc.1 IDKIEFIP 1bgla.1_ds -S-EEEEEe- 1dlc.1_dss EEEEEEEE Similar 11111111--
1bia.1 mkdntVPLKLIALLAn geFHSGEQLGETLGMSRAAINKHIQTLRDWGvDVFTV 1dtr.1 lvdTTEMYLRTIYeleeegvTPLRARIAERLEQSGPTVSQTVARMERDG LVVVA 1bia.1_dss ----hHHHHHHHHHTt ss-B-HHHHHHHHTS-HHHHHHHHHHHHHTT---EEE 1dtr.1_dss ---HHHHHHHHHHhhhhhts--BHHHHHHHTTS-HHHHHHHHHHHHTTT SEEE- Similar --00011111111110----0011111111111111111111111111111-11111 1bia.1 pgkGYSlpe 1dtr.1 sdrSLQ 1bia.1_dss tttEEE-ss 1dtr.1_dss sssBEE Similar 000111---
1bmda.1 mkapVRVAVTGaAGQIGYSLLFRIAAGemlgkdqpVILQLLEipqamKALEGVvm 1cero.1 MKVGING FGRIGRQVFRILHSR gvEVALINDl tdnKTLAHLlkyd 1bmda.1_ds ----EEEEESStTSHHHHHHHHHHHTTttt-tt--EEEEEE--ggghHHHHHHhh 1cero.1_ds -EEEEE- -SHHHHHHHHHHHHH t--EEEEE-s s-hHHHHHHhh-- Similar ----1111111-111111111111111------0011111110-00011111100-- 1bmda.1 eledcafpllaGLEATDdpd vafkDADYALLVGAapr 1cero.1 siyhrfpgevayddqylyvd gkAIRATAvkdpkeipwaeaGVGVVIESTGvft 1bmda.1_ds hhhttt-tteeEEEEES-hh hhttT-SEEEE------ 1cero.1_ds ttt-s-ss-eee-sseeeet teEEEEE--s-gggs-hhhhTEEEEEE-SSs-- Similar ---------------00000----01111111000-----00001111111111000 1bmda.1 kagmerrdllqvngkIFTEQGRalaevakkdvKVLVvGNPAntnalia yknap 1cero.1 dadKAKAHLEg gakKVII TAPAkgeditivmgvnheay 1bmda.1_ds -tt--hhhhhhhhhhHHHHHHHhhhhhs-tt-EEEE-SSSHhhhhhhh hht-t 1cero.1_ds bhhHHHTTGGg t-sEEEE SS--bs-see--tttsggg- Similar ------------00011111110------0001111-11110000000----00000 1bmda.1 glnPRNFTA 1cero.1 dpsRHHIISnasnewgyanrvadlvelvlrkg 1bmda.1_ds ts-GGGEEE 1cero.1_ds -ttT--EEE---tthhhhhhhhhhhhhhhht- Similar 000111111-----------------------
1bmda.1 mkaPVRVAVTGaAGQIGYSLLFRIAAGEmlgkdqpVILQLLEIpqAMKALEGVVMEL 1llda.1 PTKLAVIG AGAVGSTLAFAAAQRG iaREIVLEDI AKERVEAEVLDM 1bmda.1_ds ----EEEEESStTSHHHHHHHHHHHTTTtt-tt--EEEEEE--ggGHHHHHHHHHHH 1llda.1_ds --EEEEE- -SHHHHHHHHHHHHTT --SEEEEE-S SHHHHHHHHHHH Similar ---11111111-1111111111111111-----0011111111--111111111111 1bmda.1 EDC aFPLlaGLEATDDpDVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQ 1llda.1 QHGssfYPT vSIDGSDD PEICRDADMVVITAGPRQKPGQSRLELVGATVNILKAI 1bmda.1_ds HTT t-TTeeEEEEES-hHHHTTT-SEEEE-------TT--HHHHHHHHHHHHHHH 1llda.1_ds HHTgggSTT -EEEEES- GGGGTT-SEEEE-------TT--HHHHHHHHHHHHHHH Similar 111--0111-01111111-11111111111111111111111111111111111111 1bmda.1 GRALAEVaKKDVKVLVVGNPANTNALIAYKNApgLNPRNFTA 1llda.1 MPNLVKV APNAIYMLITNPVDIATHVAQKLT gLPENQIFGs 1bmda.1_ds HHHHHHHs-TT-EEEE-SSSHHHHHHHHHHT-ttS-GGGEEE 1llda.1_ds HHHHHHH -TTSEEEE--SSHHHHHHHHHHHH t--TTSEEE- Similar 1111111-111111111111111111111111-011111111-
1bnca.1 mldKIVIAn rGEIALRILRACKELGIKTVAVhssadrdlkhvlladet 2dln.1 mtdKIAVLlggtsaerevsLNSGAAVLAGLREGGIDAYPVdp 1bnca.1_ds ---EEEE-s -HHHHHHHHHHHHHTT-EEEEEeegggtt-hhhhh-see 2dln.1_dss --sEEEEE---sstthhhhHHHHHHHHHHHHHTT-EEEEE-t Similar 000111110---------011111111111111111111100--------------- 1bnca.1 vcigpapsvksylnipaIIsAAEITGAVAIHP GYGfLSENANFAEQVERSGFIFIG 2dln.1 kevdVT QLKSMGFQKVFIaLHGrGGEDGTLQGMLELMGLPYTG 1bnca.1_ds eeee-ssgggttt-hhhHHhHHHHHT--EEE- -SSsSTT-HHHHHHHHHTT-EESS 2dln.1_dss tts-GG GSGGGTEEEEEE---StTTSSHHHHHHHHHHT--BSS Similar -------------000011-111111111111-111011111111111111111111 1bnca.1 PKAETIRLM 2dln.1 SGVMASALSm 1bnca.1_ds S-HHHHHHH 2dln.1_dss --HHHHHHHh Similar 111111111-
1bova TPD CVTGKVEYTKYn dDDTFTVKV GDKELFt
1chpd tpqnitdlcaeyhnTQIhTLNDKIFSYTEsladkREMAIITFkNGATFQvevpgsqh
1bova_dssp --E EEEEEEEEEEE- tTS-EEEEE TTEEEEe
1chpd_dssp ---shhhhhttsttEEEeEEEE---EEEEe-stt--EEEEE-tTS-EEE-----tts
Similar --------------111-111111111110---011111111-1111110-------
1bova nrWNLQSLLLSAQITGMT VTIKtnachnGGGFSEVIF
1chpd idsqkkaiERMKDTLRIAYLTEAKvEKLCvwnnktPHAIAAISMa
1bova_dssp --GGGHHHHHHHHHHT-E EEEE-ss-stTEE--EEEE
1chpd_dssp -hhhhhhhHHHHHHHHHHHHHT--eEEEEeettssSEEEEEEEEe
Similar ------001111111111111111-1111000000111111111-
1btl hpETLVKVKDAEDQLG ARVGYIELDlnsGKiLES fr
2blta pvsekqlaeVVANTITPLMKAQSvPGMAVAVIY qGK PHYytfgkadiaankpvt
1btl_dssp -hHHHHHHHHHHHHHT SEEEEEEEEttt--eEEE es
2blta_dssp ---hhhhhhHHHHHHHHHHHHTT-SEEEEEEEE tTE EEEeeeeeeettttee--
Similar -------0011111111111111-111111111--011-111-------------00
1btl PEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRihysqndlveyspvtekhLtDgMT
2blta PQTLFELGSISKTFTGVLGGDAIARGEISLDDAvtryw pqltgkqWqG IR
1btl_dssp TTS-EE-GGGHHHHHHHHHHHHHHTTS--TT-Ee---ggg--s--ttggg-TtT-EE
2blta_dssp TT-BEE-GGGHHHHHHHHHHHHHHHTS--TTSBgggt- tt---ggGtT -B
Similar 11111111111111111111111111111111100000------0000000101-11
1btl VRELCSa aitMSDNTAANLLLT
2blta MLDLATytagglplqvpdevtdnasllrfyqnwqpqwkpgttrLYANASIGLFGAla
1btl_dssp HHHHHHh hhhS--HHHHHHHHH
2blta_dssp HHHHHHt-ss---ss--tt--shhhhhhhhhh---ss-ttsee---HHHHHHHHHhh
Similar 1111110---------------------------------000111111111111--
1btl tiGGPKELTA FLHNMGDHVTRLdrwepel neaipn
2blta vkpsgmPYEQAMTTrVLKPLKLDHTWInvpkaeeahyawgyrdgkavrvspgmldaq
1btl_dssp hhT-HHHHHH HHHHTT-SS------ttgg g---tt
2blta_dssp tggg-s-HHHHHHHhTHHHHT-TTEESs--tttgggb--eessssee-----tthhh
Similar ----0011111111-1111111111110000000-----------------000000
1btl derdTTMPVAMATTLRKLLtge lltlaSRQQLidwmea d
2blta aygvKTNVQDMANWVMANMapenvadaslkqGIALAqsrywrigsmyqglgwemlnw
1btl_dssp --ttEE-HHHHHHHHHHHHhss ss-hhHHHHHhhhhht -
2blta_dssp ht--EE-HHHHHHHHHHHH-ggg--shhhhhHHHHHtseeeeetteee-ss-eeees
Similar 0000111111111111111000----0000011111000000--------------0
1btl kvagpllRsal pagwFIADKSGAGErGSRGIIAAlgpd
2blta pveantvVegsdskvalaplpvaevnppappvkaSWVHKTGSTG GFGSYVAF
1btl_dssp -s-tttgGgg- -tt-EEEEEEEE-StT-EEEEEEeest
2blta_dssp s--hhhhHhhtshhhhts-ee-eeeeeee---ssEEEEEEEE-S S-EEEEEE
Similar 00000001000-------------------00001111111111-11111111----
1btl gkP SRIVVIYTtgsqatmdeRNRQIAEI GASLikh
2blta ipEkQIGIVMLAn tsyPNPARVEAaYHILea
1btl_dssp ts- -EEEEEEEe---s-hhhHHHHHHHH HHHHhht
2blta_dssp egGgTEEEEEEEs b---HHHHHHHhHHHHh-
Similar 001-111111110-----00011111111-111100-
1bvc vlSEGEWQLVLHVWAKv eadVAGHGQDILIRLFKSHPETLEKFDrFKHlKTEA
1ash ANKTRELCMKSLEHakvdtsneARQDGIDLYKHMFENYPPLRKYFKsREE YTAE
1bvc_dssp ---HHHHHHHHHHHHHh ttsHHHHHHHHHHHHHHHSGGGGGG-TtTTT--SHH
1ash_dssp -HHHHHHHHHHGGGs--ssshhHHHHHHHHHHHHHHH-GGGGGGSTtTTT --HH
Similar --111111111111110----0001111111111111111111111110111-1111
1bvc EMKASEDLKKHGVTVLTALGAILKKk ghHEAELKPLAQSHAt kHKIPIKYLEF
1ash DVQNDPFFAKQGQKILLACHVLCATyddretFNAYTRELLDRHArdhVHMPPEVWTD
1bvc_dssp HHHH-HHHHHHHHHHHHHHHHHHHTt t--HHHHHHHHHHHHh tT---HHHHHH
1ash_dssp HHHH-HHHHHHHHHHHHHHHHHHHTttshhhHHHHHHHHHHHHHhtt----HHHHHH
Similar 11111111111111111111111110---0011111111111110-01111111111
1bvc ISEAIIHVLHSRhpgdFGADAQGAMNKALELFRKDIAakykelgyq
1ash FWKLFEEYLGKK ttLDEPTKQAWHEIGREFAKEIN
1bvc_dssp HHHHHHHHHHHH-ttt--HHHHHHHHHHHHHHHHHHHhhhhhht--
1ash_dssp HHHHHHHHHHHH s---HHHHHHHHHHHHHHHHHHT
Similar 111111111111--00111111111111111111111---------
1cdka kgseqesvkeflakakedflkkwenpaqntahLDQFERIKTLGTGSFGRVMLVKHKE
1ckia melrvGNRYRLGRKIGSGSFGDIYLGTDIA
1cdka_dssp -thhhhhhhhhhhhhhhhhhhhhhs-------GGGEEEEEEEEE-SS-EEEEEEETT
1ckia_dssp ---eeTTTEEEEEEEEE-SSSEEEEEEETT
Similar ---------------------------000001111111111111111111111111
1cdka TGNHFAMKILDKqkvvklkqieHTLNEKRILQA VNFPFLVKLEYSFKDNSNLYMVM
1ckia AGEEVAIKLECVkt khpQLHIESKIYKMmQGGVGIPTIRWCGAEGDYNVMVM
1cdka_dssp T--EEEEEEEEHhhhhhtt-hhHHHHHHHHHHH ---TTB--EEEEEE-SSEEEEEE
1ckia_dssp TTEEEEEEEEES-t ts--HHHHHHHHHHsTTSTT---EEEEEEETTEEEEEE
Similar 11111111111100-----00011111111111-11111111111111111111111
1cdka EYvpGGEMFSHLR rIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDq
1ckia EL lGPSLEDLFNfcSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGl
1cdka_dssp ---tT-BHHHHHH hH-S--HHHHHHHHHHHHHHHHHHHHTTEE----SGGGEEE-t
1ckia_dssp E- ---BHHHHHHhtTT---HHHHHHHHHHHHHHHHHHHHTTEE-S---GGGEEE--
Similar 11-0111111111-0111111111111111111111111111111111111111110
1cdka qGYIQVTDFGFAKRv kGRt wTLCGTPEYLAPEIILSKGYNKAVD
1ckia gkkgNLVYIIDFGLAKKyrdarthqhiPYrenkNLTGTARYASINTHLGIEQSRRDD
1cdka_dssp tS-EEE---TT-EE- sS-b ----S-GGG--HHHHTT--B-TTHH
1ckia_dssp gggtT-EEE---SS-EE-b-ttt--b----b--S----SSS--HHHHTTB---HHHH
Similar ---011111111111110--------0110--0111111111111111111111111
1cdka WWALGVLIYEMAAGYPPFFADQPIQIYEKIVsgk vrfpSHFSSDLKDLLRNllqVD
1ckia LESLGYVLMYFNLGSLPWQGLKYERISEKKMstpievlcKGYPSEFATYLNF cRS
1cdka_dssp HHHHHHHHHHHHHSS-SS--SSHHHHHHHHHh-- ----TTS-HHHHHHHHHhs-SS
1ckia_dssp HHHHHHHHHHHHHSS-TT----HHHHHHHHHhs-hhhhtTTS-HHHHHHHHH hHH
Similar 1111111111111111111111111111111000-00001111111111111--011
1cdka LtkrfgnlkdGVNDIKNhKWFattdwiaiyqrkvEAp fiPKFkGpgdtsnfddy
1ckia L rfddkpDYSYLRQ LFRnlfh rqgfsyDYvfdwnmLKFgAs
1cdka_dssp Ttt-ttssttTTHHHHTsGGGtt--hhhhhtt-s--s -----sStt--tts---
1ckia_dssp S -tt----HHHHHH HHHhhhh hht---S---hhhhGGGt--
Similar 1---0000001111111-1110000---000000110---00111010---------
1cdka eeeeirvsinekcgkefse
1ckia
1cdka_dssp --------ss--stgggtt
1ckia_dssp
Similar -------------------
1cdp AFAGVln
1lin qlteEQIAEfkeafslfdkdgdgtittkelgtvmrslgqnpteaelqdminevdadg
1cdp_dssp --TTSs-
1lin_dssp ---hHHHHHhhhhhhhh-tt-ssee-hhhhhhhhhhtt----hhhhhhhhhhh-ss-
Similar ----1111100----------------------------------------------
1cdp dadiAAAleackaadsfnhkaffakvgltsksaddvkkafaiidqdksgfieede
1lin ngtidfPEFltm
1cdp_dssp hhhhHHHhhht-stt---hhhhhhhhtgggs-hhhhhhhhhhhstt-ssee-hhh
1lin_dssp ssseehHHHhhh
Similar --0000111000---------------------------------------------
1cdp lklflqnfkadARA lTDGETKTFLKAGDSDGDGKIGVDEFTALVK
1lin marKMKdtdSEEEIREAFRVFDKDGNGYISAAELRHVMTnlgekltdee
1cdp_dssp hhtggggtstt--- --HHHHHHHHHHH-TT-SSSEEHHHHHHHHH
1lin_dssp hh----tts-HHHHHHHHHHH-TT-SSEE-HHHHHHHHHhtt----hhh
Similar --------000111--0111111111111111111111111111111----------
1cdp
1lin vdemireadidgdgqvnyeefvqmmta
1cdp_dssp
1lin_dssp hhhhhhhh-sssssseehhhhhhhhtt
Similar ---------------------------
1cela xsactlqsethppltwqkcssggtctq qtGSVVIDAnwrwthatnsstnc
1gbg qtgg sfyepfnnyntgLWQKADGysngnm
1cela_dssp -ee--ss-----eeeeeee-tts-eee eeEEEEE-Gggs-eeettss-bs
1gbg_dssp ---- -eee--ss--ttTEEE--Sb---tt
Similar --------------0000------000-------001111111000000--------
1cela ydgntwsstlcpdnetcaknccldgaayastyGVTTs gnSLSIGFvtqsaqkNVGA
1gbg fnctwranNVSMtslgEMRLSLtspsynkFDCG
1cela_dssp eettee-ttt-sshhhhhhheee----hhhhh-EEEe ttEEEEESeeessseEE-E
1gbg_dssp b-see-ggGEEE-tts-EEEEEeeeetteEEEE
Similar ------------------------0000000011110-0011111100000001111
1cela RLYLmasdttyQEFtllGNEFSFDVDvsQLPCGLNGALYFVsmdadggvskyptnta
1gbg ENRS vQTY gYGLYEVNMK pAKNVGIVSSFFTYtgp
1cela_dssp EEEEeeettee-EEe-tTEEEEEEEE-tT--TTEEEEEEEE---ttttttt-tt--s
1gbg_dssp EEEE sS-B -SEEEEEEEE ----TTEEEEEEEEe-g
Similar 1111------0111--0111111111-01111111111111000-------------
1cela gakygtgycdsqcprdlkfingqanvegwepssnnantgigghgsccSEMdIWE
1gbg tdgtpwDEI DIEflg
1cela_dssp -gggt----btt--s--seettee--tt-ee-ss-tt-ee-seeee--EEeEEE
1gbg_dssp ggts--EEE EEEeet
Similar -----------------------------------------000000111-111---
1cela anSISEALTPHPcttvgqeicegdgcggtysdnryggtcdpDGCDWNpyrlgntsfy
1gbg kdTTKVQFNYYTn gvGNHEKIv
1cela_dssp e-SS-EEEEEE-bss-s-eeeegggg-sttsssttsssb-sS---B-ttttt-ttse
1gbg_dssp t-TTEEEEEEEBt tb----EEe
Similar 0011111111110--------------------------001111110---------
1cela gpgssfTLD TTKKLTVVTQFETsGAINRYYvqngvTFQqpnaelgsysgnELnddy
1gbg nlGFDaANSYHTYAFDWQP NSIKWYV dGQL khTA
1cela_dssp essttsSEE TTS-EEEEEEE-TtS-EEEEEeetteEEE---eeetteees-B-hhh
1gbg_dssp e-SS-tTTS-EEEEEEEET TEEEEEE tTEE eeEE
Similar ----00111-1111111111111-1111111----0111----------0011----
1cela ctaeeaefggssfsdkggltQFkkatSGGMVLVMSLWDDYYAnMLWldstyptnets
1gbg ttQI pQTPGKIMMNLWNGAGV DEW
1cela_dssp hhhhhhhh---hhhhtthhhHHhhhhTSEEEEEEEEEE-TTTtTHHhhsbsstt--t
1gbg_dssp -sS- --S-BEEEEEEEEBSS- HHH
Similar ------------------0011---01111111111111111-111-----------
1cela stpgavrgscstssgVpaqvesqSPNAKVTFSNIKfgpigstgnps
1gbg lgSy ngVTPLYAHYNWVRytk
1cela_dssp tstt-b-sss-tt---hhhhhhh-TT-EEEEEEEEeeett-tts--
1gbg_dssp h--- -----EEEEEEEEEeee
Similar -------------0010----00111111111111000--------
1cewi gaPVPVDEnDEGLQRALQFAMAEYNRasndkysSRVVRV ISAKRQL vSG
1mola geWEIIDI GPFTQNLGKFAVDEENKig qygrLTFNKViRPCMKKTiyenereiKG
1cewi_dssp ---EE--Tt-HHHHHHHHHHTHHHHTts--seeEEEEEE EEEEEEE sSS
1mola_dssp -eEEEE-- SHHHHHHHHHHHHHHHHh- tt-s--EEEEeEEEEEEEeeettteeEE
Similar 00111111-1111111111111111100-0000111111-1111111-------011
1cewi IKYILQVEIgrttcpkssgdlqscefhdepemakYTTCTFVVYSIPWLNQIKLLESK
1mola YEYQLYVYA sDKLFRADISEDYKTRGRKLLRFN
1cewi_dssp EEEEEEEEEeeeeeett-tthhhhhhhh-ss-s-EEEEEEEEEEETTTTEEEEEEEE
1mola_dssp EEEEEEEEE tTEEEEEEEEEETTT--EEEEEEE
Similar 111111111------------------------011111111111111111111111
1cewi C
1mola Gpvpp
1cewi_dssp E
1mola_dssp -----
Similar 1----
1chma.1 MIKSAEEHVMIRHGARIADIGGAAVVEALGDQVPEYEVALHATQAMVraiadtfe
1mat aiSIKTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVn
1chma.1_ds TS--HHHHHHHHHHHHHHHHHHHHHHHH--TT-BHHHHHHHHHHHHHhhhhhh-s
1mat_dssp ------HHHHHHHHHHHHHHHHHHHHHTTT--TT-BHHHHHHHHHHHHHt
Similar --111111111111111111111111111111111111111111111110-------
1chma.1 dvelMD twTWFQSGIntDGAHNPVT TRKVNKGDILSLNCFPMIAGYY
1mat eqhaVSaclgyhgypksVCISINE VVCHGIPDdAKLLKDGDIVNIDVTVIKDGFH
1chma.1_ds s--b-- -eEEEEEGGggGSTT--EE S-B--TT-EEEEEEE-EETTEE
1mat_dssp ts--EEssttggg--ssSEEEETT EEE-----tT-B--SS-EEEEEEEEEETTEE
Similar 000011---------001111111--11111111-1111111111111111111111
1chma.1 TALERTLFLDHCSDDHLRLWQVNVEVHEAGLKLIKPGARCSDIARELNEIFLKHDvl
1mat GDTSKMFIVGKPTIMGERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAEGfs
1chma.1_ds --EEEEEEES---HHHHHHHHHHHHHHHHHHHH--TT-BHHHHHHHHHHHHHHHT-g
1mat_dssp EEEEEEEE-SS--HHHHHHHHHHHHHHHHHHHH--TT-BHHHHHHHHHHHHHTTT-e
Similar 111111111111111111111111111111111111111111111111111111100
1chma.1 qyrtfgYGHSFGTLshyygReaGLELr eDIDTVLEPGMVVSMEPMIM
1mat v vreyCGHGIGRG fhE EPQVlhydsrETNVVLKPGMTFTIEPMVNagkkei
1chma.1_ds ggb-s-S-BB-SBEettee--tTSB-- tT---B--TT-EEEE--EEE
1mat_dssp e --s--EEE-SSS ssE EEEE-ss--tT---B--TT-EEEE--EEEss-s-e
Similar 0-000011111111---001--11110----01111111111111111111------
1chma.1 lpeGlpgaGGYREHDILIVNENGAENITK FPygpekniI
1mat rtmkdgwtvktkdR sLSAQYEHTIVVTDNGCEILTLrKDdtipaiiShd
1chma.1_ds e-tTstt-EEEE-BEEEEEETTEEEE--- S--shhhheE
1mat_dssp ee-tts--eeess- --EEE-BEEEEEETTEEEETT--TT--s-seeE--
Similar ----------0001---0111111111111111111111-1100000101--
1cid.1 tSITAYKSEGESAEFSFPLNl geESLQGELRWKAekaps sQsWITfslk 1mcda.1 psaltqPPSASGSLGQSVTISCTGTssdvgGYNYVSWYQQH agkapKvIIY 1cid.1_dss ---EEEEETTS-EEEE----- ss--EEEEEEEEEss--- s--EEEeeee 1mcda.1_ds ---bb--SEEEEETTSEEEEEEE--ttsbtTBS-EEEEEE- tts--EeEE- Similar -----011111111111111111110--0011111111111--000-010111---- 1cid.1 nqkvSVQKS TSNPKFQLs etlPLTLQIPQVSLQFAGSGNLTLTLd rGILY QEV 1mcda.1 eVNKRPsGVPDRFSGsksgnTASLTVSGLQAEDEADYYCSSYEgsdNFVFgTGT 1cid.1_dss tteeEEES- --SS--EE- sbtT-EEEE-S--GGG-EEEEEEEE-s sSEEE EEE 1mcda.1_ds sSS---sS--TEEEEeeettEEEEEEES--GGG-EEEEEEEE-stt-EEEb--E Similar ---011111-111111110-000111111111111111111111110-01111-111 1cid.1 NL 1mcda.1 KVtvl 1cid.1_dss EE 1mcda.1_ds EEeee Similar 11---
1clc.1 ietkvsaakitenyqfdsRIRLnSIGFi pNHSKKATIa aNCStFYVv 1lmka.1 vQLQQ SGTElmkpgrSLKISCKTtgyifsNYWiEWVkqr 1clc.1_dss ---tt---b--s---b-tTEE--SSEE- tTS--EEEEs s---eEEEe 1lmka.1_ds -EEEE ---Eee-tt--EEEEEEEess-ttTEEeEEEee- Similar -----------------01111-11110----0111111110----011101110-- 1clc.1 keDGTivYTGtatsmf dndtketVYIADFSs vnEEGTYYL 1lmka.1 pghGLE wIGKilpgggsntyndkfkgkatftadtsSNIAYMQlssltseDSAVYYC 1clc.1_dss etTSBeeEEEe-eeee etttteeEEEEE-Tt --S-EEEEE 1lmka.1_ds tts-EE eEEEeetttteeee-gggttteeeeeettTTEEEEEe-s--ggG-EEEEE Similar -00111-0111000000------------000000011111111----001111111 1clc.1 AVp gvGKSVNFK 1lmka.1 ARgedyyaywyvldYWGQGTTvtvssgggg 1clc.1_dss EEt ttEE---EE 1lmka.1_ds EEeeettss-----EE---EEeee-----s Similar 110---------001111111---------
1cmba aewsgeyispyaehgkkseqVKKITVSIPLKVLKILTDERTRrqvnnlrhATNSELL
1para mkgmskMPQFNLRWPREVLDLVRKVAEE ngRSVNSEI
1cmba_dssp ----s----ssseettee--EEEEEEEEEHHHHHHHHHHHHHhhhhtbs--SHHHHH
1para_dssp ---tttS-EEEEE--HHHHHHHHHHHHH htS-HHHHH
Similar --------------0000001111111111111111111111------001111111
1cmba CEAFLHAFtgqplpddadlrkersdeipeaakeimremginpetwe
1para YQRVMESFkkegri
1cmba_dssp HHHHHHHHh------ggggbtts-s-s-hhhhhhhhhtt--tts--
1para_dssp HHHHHHHHhhhts-
Similar 11111111000000--------------------------------
1cpca mktplteavaaadsqgrflssteiqtafgrfrqASASLAAAKALTEK aSSLASG
2gdm galtESQAALVKSSWEEFnaniPKHTHR
1cpca_dssp ---hhhhhhhhhhhht----hhhhhhhhhhhhhHHHHHHHHHHHHHT hHHHHHH
2gdm_dssp ----HHHHHHHHHHHHHHhtthHHHHHH
Similar -----------------------------000011111111111111---0111111
1cpca AANAVYSKFPYTtsqngpn fastqtgkDKCVRDIGYYLRMVTYCLVV gGTg
2gdm FFILVLEIAPAAkdlfsflkgtsevpqnnPELQAHAGKVFKLVYEAAIQlevtgVVv
1cpca_dssp HHHHHHHH-THHhhs-stt sssshhhhHHHHHHHHHHHHHHHHHHHH tSSh
2gdm_dssp HHHHHHHH-GGGggg-ttttt-ss--ss-HHHHHHHHHHHHHHHHHHHHhhhhsS--
Similar 1111111111110000000--0000000011111111111111111111----0110
1cpca plddylIGGIAEINRTFDLSPSWYVEALKYIKAN hgLSGDPAVEANSYIDY
2gdm t datLKNLGSVHVSKGVADAHFPVVKEAILKTikevvgakWSEELNSAWTIAYDE
1cpca_dssp hhhhhtTTTHHHHHHHHT--HHHHHHHHHHHHHH s---HHHHHHHHHHHHH
2gdm_dssp - -hhHHHHHHHHHHTT--GGGHHHHHHHHHHHhhhhhggg--HHHHHHHHHHHHH
Similar 0--0001111111111111111111111111111------00111111111111111
1cpca AINAl
2gdm LAIVikkemdda
1cpca_dssp HHHHt
2gdm_dssp HHHHhhhhhhh-
Similar 11110-------
1ctm.1 NTVYNAt agGIISKILrkekgG yE
1htp snvldglkyapshewvkhegsVATIGItdhaqdhlgeVVFVELPe pgvSvtkgkgF
1ctm.1_dss SS--B-s s-EEEEEEEe-tts- eE
1htp_dssp ----tt-ee-ttseeeeeettEEEEEE-hhhhhhh-sEEEEE--- tt-Ee-btseE
Similar ---------------------1111110-------0011111110-0001-----01
1ctm.1 ITIVDasnERQVIDI iPRG LELLV sEg eSIk ldqPLTS
1htp GAVES vKATSDVNspiSGEvIEVNTglTgkpGLinsspyedgWMIKikptspdel
1ctm.1_dss EEEEEtttTEEEEEE e-TT --B-- -Tt -EE- tt-B-B-
1htp_dssp EEEEE sS-EEEEEbss-EEeEEE-ThhHh-tTHhhh-ttttt--EEeees-gggg
Similar 11111--01111111--0111-11111-010-0110-----0001111---------
1ctm.1
1htp esllgakeytkfceeedaa
1ctm.1_dss
1htp_dssp ggsb-hhhhhhhhhhhhtt
Similar -------------------
1ctn.1 aaPgKPTIAWG nTKF 1ggta.1 fggrravppnnsnaaeddlptveeFlNVTSVHLfkerwdtnkvdhhtdkyennkLIV 1ctn.1_dss ------EE-S- --EE 1ggta.1_ds ---s-ss-----ss------------EEEEEE---ttshhhhhht--sss-sseEEE Similar ----------------------00111111111--------------------0111 1ctn.1 AivevdqaataynnlvkvknaADVSVSWNlwnGdt gTTAKILL 1ggta.1 R rgQSFYVQID fSrpydprrDLFRVEYvigrypqenk 1ctn.1_dss Eseee-ss--shhhheee-ssEEEEEEEE--sS-- -SEEEEEE 1ggta.1_ds T t--EEEEEEE sS---ttt--EEEEEE-sss--gggt Similar 1------------------0111111111--0100----01111111---------- 1ctn.1 ngKEAWSg pstgSSGTANFK vNKGGRYQMQVALCNADGCT 1ggta.1 gtyIPVPIvselqsgkwgakivmredRSVRLSIQsspkCIVGKFRMYVAVWTPYGVL 1ctn.1_dss ttEEEEEe e--sSEEEEEEE e-S-EEEEEEEEEEETTEEE 1ggta.1_ds seeEE-EEss--tts-eeeeee--ttEEEEEEE--tt---EEEEEEEEEEETTEEEE Similar -01111110-------------000011111111---01111111111111111111 1ctn.1 ASDA tEIVVA 1ggta.1 RTSRnpetDTYILfnpwce 1ctn.1_dss E--- eEEEEE 1ggta.1_ds ----ggg-EEEE--tt-tt Similar 1111---011111------
1eaf ippippvdfakygeieevpmtrlmqigatnlhrswlnvPHVTQFESADITELEAFRV
1qca mnytkfdvknwvrrehfefyrhrlpCGFSLTSKIDITTLKKSLD
1eaf_dssp --------ggggs--------hhhhhhhhhhhhhhhhs-EEEEEEEEE-HHHHHHHH
1qca_dssp --eee--ggg-tthhhhhhhhtts--EEEEEEEEE-HHHHHHHH
Similar -------------00000000000000000000000001111111111111111111
1eaf AqkavakkagvkLTVLPLLLKACAYLLKELPDFNSSLApsgqALIRKKYVHIGFAVD
1qca D saYKFYPVMIYLIAQAVNQFDELRMAIKd dELIVWDSVDPCFTVF
1eaf_dssp Hthhhhhhtt----HHHHHHHHHHHHHHHSGGGSEEE-ttss-EEE-SS--EEE-EE
1qca_dssp T ss--HHHHHHHHHHHHHHT-GGGSEEEEt tEEEEES--EEEEEEE
Similar 1---------00111111111111111111111111110--0111111111111111
1eaf t pdgLLVPVIrNVDQkSLLQLAAEAAELAEKARS kklgadamqGACFTISSlg
1qca hqetetFSALSC PYSS DIDQFMVNYLSVMERYKSdtklfp qgpENHLFISA l
1eaf_dssp e tteEE--EEs-GGGs-HHHHHHHHHHHHHHHHT t---ggggs--SEEEEE-t
1qca_dssp etttteEEEEE- ---S SHHHHHHHHHHHHHHHTT--ssst t----EEEEEE e
Similar 0--000111111-1111-111111111111111111--0000--00011111111-0
1eaf HIGG TAFTPi vna pEVAILGVSKASMQpvwdgkafqPRLMLPLSLSYDHRVIN
1qca PWVNfDSFNLnvanftdfFAPVITMAKYQQE gDRLLLPLSVQVHHAVCD
1eaf_dssp TT-- S----- --t tSSEEEEE---EEEeee-ssseeEEEEEEEEEEEETTT--
1qca_dssp TT---S------s--tt--S-EEEEE--EEE tTEEEEEEEEEEETTT--
Similar 1111-111110--000-01111111111111--------011111111111111111
1eaf GAAAARFTKRLGDLLadirail
1qca GFHVARFINRLQELCnskl
1eaf_dssp HHHHHHHHHHHHHHHh-ggggg
1qca_dssp HHHHHHHHHHHHHHHts--
Similar 1111111111111110000---
1eny aglLDGKRILVSGiit
1gdha.2 vtvataeiamllllgsarragegekmirtrswpgweplelvgekLDNKTLGIYGf
1eny_dssp --tTTT-EEEEE---s
1gdha.2_ds -hhhhhhhhhhhhhhhhtthhhhhhhhhtt------tttt-b---TT-EEEEE--
Similar -----------------------------------------00011111111110--
1eny dssIAFHIARVAQEQGAQLVLTgFDRlRLiQrITDrlpAKAPLLEldvqneehLASL
1gdha.2 gsIGQALAKRAQGFDMDIDYF DTH RAsSsDEA sYQATFHD sLDSL
1eny_dssp ttsHHHHHHHHHHHTT-EEEEEe-S-hHHhHhHHTtssS---EEE--tt-hhhHHTH
1gdha.2_ds shHHHHHHHHHHTTT-EEEEE -SS ---HhHHH hHT-EE-S sHHHH
Similar -001111111111111111111-111-11011111--01111111-------01111
1eny agrvteaigagnkLDGVVHSIGFmpqtgmginpffdapyadvskgihISaysYASMA
1gdha.2 ls vSQFFSLNAPSt peTRyffNKATI
1eny_dssp hhhhhhhh-tt--EEEEEE------gggtsss-gggs-hhhhhhhhhHHthhHHHHH
1gdha.2_ds hh h-SEEEE----- ttTTt-bSHHHH
Similar 00----------011111111110---------------------011100011111
1eny KAlLPImnpgGSIVGmdfdpsrampaynwmtvaksaLESVNRFVAREAgkygvRSNL
1gdha.2 KS LPQ gAIVVNt argdl vDNELVVAALEAGr laYAGF
1eny_dssp HHhGGGeeeeEEEEEee---ss--ss-hhhhhhhhhHHHHHHHHHHHHhttt-EEEE
1gdha.2_ds TT S-T tEEEEE- s-ggg b-HHHHHHHHHHTs eeEEEE
Similar 11-111---0111110------------00000--01111111111110--001111
1eny Vaagpirtlamsaivggalgeeagaqiqlleegwdqrapigwnmkdatpvaktvcal
1gdha.2 Dvfagepn i
1eny_dssp Eee-----hhhhhhhtttt-hhhhhhhhhhhhhhhhh-tt---tt--hhhhhhhhhh
1gdha.2_ds S--tttts -
Similar 10000000------------------------------------------------0
1eny lsdwlpatTGDIIyadggahtql
1gdha.2 negyydlpNTFLFphigs
1eny_dssp httsstt--SEEEeesttggg--
1gdha.2_ds -ttggg-tTEEE-ss-tt
Similar 000000001111100000-----
1fca AYVI NEACISCGACEPecpvDAISQg gSRYVI DADTCID cGACAGVCPV
1fxra arKFYVdQDECIACESCVEi apGAFAMdpeiEKAYVkDVEGASQeevEEAMDTCPV
1fca_dssp -EEE -TT-----TTGGg-tt--EE-- sSS-EE -TTT--- --HHHHT-TT
1fxra_dssp --EEEE-TTT-----HHHHh -tTTEEEetttTEEEEs-TTSS-HhhhHHHHHH-TT
Similar --1111-1111111111110-00111110--011111-1111111--1111111111
1fca DAPVQ
1fxra QCIHWed
1fca_dssp --EEE
1fxra_dssp --EEEe-
Similar 11111--
1fcda.1 agrKVVVVGGGTGGATAAKYIKLAdpSIEVTLIE PNTd yYTCylsnevigg 1doc.1 mktQVAIIGAGPSGLLLGQLLHKA GIDNVILErQTPdyvlgRIRagvleqgmvdl 1fcda.1_ds ---EEEEE--SHHHHHHHHHHHHH-tTSEEEEE- S-S- eE-Stthhhhhht 1doc.1_dss -b-SEEEE--SHHHHHHHHHHHHT T--EEEE-sS-Hhhhht-----eeehhhhhh Similar 000111111111111111111111--11111111-1110---0111000000000-- 1fcda.1 drklesikhgYDG 1doc.1 lreagvdrrmardglvhegveiafagqrrridlkrlsggktvtvygqtevtrdlMEA 1fcda.1_ds ss-ggggee-SHH 1doc.1_dss hhhtt--hhhhhh-eeeseeeeeetteeeeeehhhhhts--eee--hhhhhhhhHHH Similar --------------------------------------------0000000000111 1fcda.1 LRAHGIQVVHD SATGIDp dkKLVKTA gGAEFGYDRCVVAPGieliydkie 1doc.1 REACGATTVYQaAEVRLHdlqgerPYVTFErdgeRLRLDCDYIAGCDG 1fcda.1_ds HHTTTEEEE-- -EEE--t ttTEEEET tS-EEE-SEEEE---eee--ttst 1doc.1_dss HHHHT-EEETT-EEEEEE-ttsss-EEEEEetteEEEEE-SEEEE--- Similar 11111111111-1111110---00111111---011111111111111--------- 1fcda.1 qraGKIaqIAGlTndagwcpvdiktfessiHKGIHVIGDASian pmpkSGYSANS 1doc.1 fHGIsrQSIpAe rmqHGRLFLAGDAAhivpptgakGLNLAAS 1fcda.1_ds eee-HHhhHHT---ttsseeb-sss-bbssSTTEEE-TTSEe-t t--sSHHHHHH 1doc.1_dss tT-HhhHTS-Gg gseETTEEE-GGGTee--ggg--HHHHHHH Similar --011100111010-------------00011111111111000--00001111111 1fcda.1 QGKVAAAAVVVLLkGE 1doc.1 DVSTLYRLLLKAYrEGrgellerysaiclrriwkaerfswwmtsvlhrfpdtdafsq 1fcda.1_ds HHHHHHHHHHHHHhSS 1doc.1_dss HHHHHHHHHHHHHhH--gggggghhhhhhhhhhhhhhhhhhhhhhhs--tt--hhhh Similar 1111111111111111----------------------------------------- 1fcda.1 1doc.1 riqqteleyylgseaglatiaenyvglpyeei 1fcda.1_ds 1doc.1_dss hhhhhhhhhhhh-hhhhhhhhhhhs------- Similar --------------------------------
1fha
1mmob errrgltdpemaavilkalpeapldgnnkmgyfvtprwkrlteyealtvyaqpnadw
1fha_dssp
1mmob_dssp ----ttt-hhhhhhhhht--ss-s-s---sstts--ssss--hhhhhhtt-s--btt
Similar ---------------------------------------------------------
1fha
1mmob iaggldwgdwtqkfhggrpswgnettelrtvdwfkhrdplrrwhapyvkdkaeewry
1fha_dssp
1mmob_dssp stt--b-s--ss--tts--ss-ggg-s---s-tt----tt---shhhhhhhhhhhhh
Similar ---------------------------------------------------------
1fha sqvrqNy hQDSEAAINRQINLELYASYVYLSMSYYfdrddva
1mmob tdrflqgysadgqirAmnptwrtSSCNRYWGAFLFNEYGLFNAHSQGARE al
1fha_dssp -tt--S- -HHHHHHHHHHHHHHHHHHHHHHHHHHHhtsttt-
1mmob_dssp hhhhhhhhhhhtgggGs-hhhhhTTTTTHHHHHHHHHHHHHHTTHHHHHH -s
Similar ----------0000110-----0111111111111111111111111111-----00
1fha LKNFAKYFLHQSHEEREHAEKLMKLQNQrggri flq
1mmob SDVTRVSLAFWGFDKIDIAQMIQLERGFlakivpgfdestavpkaewtngevyksar
1fha_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHht--- ---
1mmob_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhstt----shhhhhhhhh-ssstthh
Similar 111111111111111111111111111100000---------------------000
1fha diqKP dCDdwesglNAME cALHLE KNVNQSL LELHKLATDKNDPHLCDFieT
1mmob lavEGlwqEV fdwnESAFsvHAVYDaLFGQFVRrEFFQRLAPRFGDNLTPFF iN
1fha_dssp ----- s-S---shhHHHH hHHHHH HHHHHHH HHHHHHHHHTT-HHHHHHhhH
1mmob_dssp hhhHHhhhS- --hhHHHHhhHTTHHhHHHHHHHhHTHHHHSGGGT--HHHHH hH
Similar 00011--011--00001111-111111-1111111-111111111111111111-01
1fha HYLNEQVKAIKELGDHVT NLRK MGA pESglAEYLfdKHT
1mmob QAQTYFQIAKQGVQDLYYnCLGDdPEFsdYNrtVMRNwtGKWleptiaalrdfmglf
1fha_dssp HTHHHHHHHHHHHHHHHH HHHH HTT tT-hhHHHHhhHHT
1mmob_dssp HHHHHHHHHHHHHHHHHIiIIIT-TTThhHHhhHHHHhhHHHhhhhhhhhhhhgggg
Similar 111111111111111111-1111-111-01100111100111---------------
1fha
1mmob aklpagttdkeeitaslyrvvddwiedyasaidfkadrdqivkavlagl
1fha_dssp
1mmob_dssp ggs-tts--hhhhhhhhhhhhhhhhhhtggggt----hhhhhhhhhtt-
Similar -------------------------------------------------
1fnb.1 hskkmeegitvnkFkpkTPYVGRCLLNTKItgddapgETWHMVFSHe geIPYRE 1ndh.1 paitlenP dIKYPLRLIDKEVVn hDTRRFRFALpspehiLGLPV 1fnb.1_dss --sbs-tt----sBbttB-EEEEEEEEEE-s-sssss-EEEEEEE-t t-----T 1ndh.1_dss --bs---T tSEEEEEEEEEEE-- sSEEEEEE--sstt-b----T Similar ------00000001--011111111111110-----01111111110---0011111 1fnb.1 GQSVGVIPDgedkngKPhKLRLYSIASSAlgdfgdakSVSLCVKRLIytndageTIK 1ndh.1 GQHIYLSARi dgNL VIRPYTPVSSDdd kgfVDLVIKVYFKdth pkfPAG 1fnb.1_dss T-EEEEE-Ssb-ttsSB---EEEE--S-Ss-ttsss-EEEEEEE--Eee-tts-EEE 1ndh.1_dss T-EEEEEEEe ttEE EEEEE--SS-Tts -s---EEEEE---tts ss-TT- Similar 1111111110---0011-1111111111100---0001111111111000-000111 1fnb.1 GVCSNFLCDLKPGAEVKLTGPVGK 1ndh.1 GKMSQYLESMKIGDTIEFRGPNGLlvyqg 1fnb.1_dss -HHHHHHHH--TT-EEEEEEEE-S 1ndh.1_dss -HHHHHHHH--TT-EEEEEEEE-Seeeee Similar 111111111111111111111111-----
1ftaa dvvtltrfvmeegrkargtgeltqLLNSLCTAVKAISSAV rKAgIAHlygi
1inp msdILQELLRVSEKAANIAracRQ QETlfqlliee
1ftaa_dssp ---bhhhhhhhhhhhht--shhhhHHHHHHHHHHHHHHHH tTTtHHHhttt
1inp_dssp ---HHHHHHHHHHHHHHHHhhhHH SHHhht----s
Similar ---------------------0001111111111111111--011-1110000----
1ftaa agvkkLDVLSNDLVMNMLKSSFAT CVLVSEEdkhaii
1inp kkegeknkkfavdfktlADVLVQEVIKENMENKFPGlgKKIFGEEsneltndlgeki
1ftaa_dssp t----HHHHHHHHHHHHHHTTT-E EEEEETT-ss-ee
1inp_dssp ----tttt----hhhhhHHHHHHHHHHHHHHHHSTTggGGEEESS-seee-tts-ee
Similar ------------000001111111111111111111--1111111000000------
1ftaa vepekrgkYV
1inp imrlgpteeetvallskvlngnklasealakvvhqdvffsdpaldsveinipqdiLG
1ftaa_dssp --ggg--sEE
1inp_dssp e----ss-s-hhhhhhhhttt-tthhhhhhhhht-------sssss------gggEE
Similar -----------------------------------------------0000000011
1ftaa VCFDPLDGSSNIDCl vSVGTIFGIYRkkstdepsekdalQPg
1inp IWVDPIDSTYQYIKgsaditpnqgifpsglqCVTVLIGVYD iQT
1ftaa_dssp EEEEEEETGGGGGGt --EEEEEEEEE---ss---gggt---g
1inp_dssp EEEEEEE-HHHHHH-------bttb-sssggG-EEEEEEEE tTT
Similar 111111111111110---------------01111111111------------011-
1ftaa rNLVAAGYALYG sATMLVLA mdCGV NCfmldpaigefi
1inp gVPLMGVINQPFvsqdlhtrrwKGQCYWGlsylgTNIhSLlppvstrsnseaqsqgt
1ftaa_dssp gGEEEEEEEEES sSEEEEEE etTEE EEeeeetttteee
1inp_dssp --EEEEEEEEEEeee-ttt--eEEEEEEEeesssEEE--S--ttsstttss-ss---
Similar 011111111111---------01111111---00111-1100000000000------
1ftaa lvdkdvkikkkgKIYS LNeayakdfdpavteyiQRkkfppdnSApYGARYVGSMVA
1inp qnpssegscrfsVVIStSEket ikGAl shvCG ERIFRAAGAGY
1ftaa_dssp eeees----ss-SEEE --gggggg--hhhhhhhHHhhs-tt-----EE-B-SSHHH
1inp_dssp -bttbttssss--EEEe-Tt-- s---- tttT- -EEEE---HHH
Similar 0000000000001111-11010----------00110---00011-11111111111
1ftaa DVHRTL VYGGIFLYPankkspngKLrlLYECNPMAYVMEKAGGMATT
1inp KSLCVIlGLADIYIFS edTT fKWDSCAAHAILRAMGGGMVDlkeclernp
1ftaa_dssp HHHHHH HH--EEEE--bttbtt-SSbtTTTHHHHHHHHHHTT-EEE-
1inp_dssp HHHHHHhTS-SEEEE- ss-- bHHHHHHHHHHHHTTT-EEEEhhhhhhs-t
Similar 111111-111111111------0011-011111111111111111111---------
1ftaa gkeAVldviPT dihQR aPIIL GSPDDVLEFLKvyekh
1inp dtgldlPQl vyHVgnegaagvdqWAnkgGLIAyRSEKQLETFLS rllqhlapva
1ftaa_dssp sssBGgg---S stt-B --EEE E-HHHHHHHHHhhhtt
1inp_dssp tss-stTB- -sS--stttttt-tTB-tt-EEEeS-HHHHHHHT- --ttt----s
Similar ---000110-0011-------00011--01111-11111111111--000-------
1ftaa
1inp th
1ftaa_dssp
1inp_dssp --
Similar --
1fus xsattcgstnysasqVRAAANAacqyyq nddtag
1brnl vintFDGVADYlqtyhklpdnyitkseaqalgwvaskgnladvapg
1fus_dssp ---eeetteee-hhhHHHHHHHhhhhhh tt--st
1brnl_dssp ---sHHHHHHHhhhhss--ttee-hhhhhhtt--gggt-hhhhstt
Similar -----------00001111111000000-----------------------000000
1fus ssTYPHTYNNYEGFdFpv dgPYQEFPiksggvYtggSPGADRVVINTNcEYAGAI
1brnl ksIGGDIFSNREGK LpgksgrTWREAD inYtsgFRNSDRILYSSD WLIYKT
1fus_dssp ts--SEEE--TT----ss -s-EEEEE--ttss--ss---SEEEEEETT--EEEEE
1brnl_dssp -eEEEEEE--TT-- S---tt--EEEEE -s--ssS--S-EEEEETT --EEEE
Similar 00111111111111-100--00111111----001000111111111111-111111
1fus ThtgasgnnFVgCSGT
1brnl T dhyQT FTKI
1fus_dssp Estt-stt--Ee-TT-
1brnl_dssp S sssSS -EE-
Similar 1-----00011-1111
1gdha.1 KKKILITWP lpEAAMARArE SYDVIAHgddPKITIDeMIETAKSVDALLITL 2dlda.1 MTKVFAYAIrkdeePFLNEWKeAhkDIDVDYT dKLLTPE TAKLAKGADGVVVYQ 1gdha.1_ds --EEEESS- --HHHHHHHhT TSEEEE--stT---HHhHHHHHTT-SEEEEET 2dlda.1_ds --EEEEES--ttthHHHHHHHhH-tT-EEE-- sS---TT GGGGSTT-SEEEE-- Similar 111111111---00111111111--1111111--0111111-111111111111111 1gdha.1 NeKCRKEVIDRIP eNIKCISTYSIGFDHIDLDACKARGIKVGNAPHgatqaredma 2dlda.1 QlDYTADTLQALAdaGVTKMSLRNVGVDNIDMDKAKELGFQITNVPVy 1gdha.1_ds Ts-B-HHHHHHS- tT--EEEEESS--TTB-HHHHHHTT-EEE----sbhhhhhhhh 2dlda.1_ds Ss-B-HHHHHHHHhhH--EEE-SSS--TTB-HHHHHHTT-B-B----s Similar 1111111111111-0111111111111111111111111111111110--------- 1gdha.1 hqandlidalfggadmsyal 2dlda.1 1gdha.1_ds hhhhhhhhhhhtts--ttb- 2dlda.1_ds Similar --------------------
1gece lpesVDwr
1gcb sssidiskinswnkefqsdlthqlattvlknynaddallnktrlqkqdnrvfnTV
1gece_dssp --s-EEtt
1gcb_dssp --s--hhhhhhhhhhhhtshhhhhhhhhhtts-hhhhhb-hhhhhhh-----sEE
Similar -------------------------------------------------000011--
1gece aKGAVTPVKHQGYCESCWAFSTVATVEGINKIKtGn lVELSEQELVDC dlq
1gcb vSTDSTPVTNQKSSGRCWLFAATNQLRLNVLSElNlkeFELSQAYLFFYdklekany
1gece_dssp tTT------B--SSB-HHHHHHHHHHHHHHHHHhS- ---B-HHHHHHH -ss
1gcb_dssp -SS---S--B--BS--HHHHHHHHHHHHHHHHHtT-ss--B-HHHHHHHhhhhhhhh
Similar 011111111111111111111111111111111010-011111111111-000----
1gece sygCNRGYQSTSLQYVAQNGIHLRAKYPyiakq
1gcb fldqivssadqdidsrlvqyllaaptEDGGQYSMFLNLVKKYGLIPKDLYGdlpyst
1gece_dssp s-tTB---HHHHHHHHHHH-B-BTTTS---ss-
1gcb_dssp hhhhhhhttts-ttshhhhhhhh-tt-S---HHHHHHHHHHH---BGGGS-s-shhh
Similar -----------------------000111111111111111111111111100000-
1gece qtcranq
1gcb tasrkwnsllttklrefaetlrtalkersaddsiivtlreqmqreifrlmslfmdip
1gece_dssp ----hhh
1gcb_dssp hb-hhhhhhhhhhhhhhhhhhhhhhhhs-ttshhhhhhhhhhhhhhhhhhhhhs---
Similar --------------------------------------------------0000000
1gece VGgpk vktnGVGrv
1gcb PVqpneqftweyvdkdkkihtikstplefaskyakldpsTPVslindprhpygklik
1gece_dssp HTs-- b---EEEe-
1gcb_dssp SS-tts-eeeeee-tts-eeeeee-hhhhhhhtt---ttSEEeee--tts-tt-eee
Similar 11000------------------------------000011100-------------
1gece qsnNEGSLLNAIA HQPVSVVVESAgrdfqNYKGgIFE
1gcb idrlgnvlggdaviylnvdnetLSKLVVKRLQnNKAVFFGSHTPk fmDKKTgVMD
1gece_dssp -ss-HHHHHHHHT TS-EEEEE---shhhhT--SsEE-
1gcb_dssp ett--sstt----eeee--hhhHHHHHHHHHHtT--EEEEE-TTt teETTTtEE-
Similar -------------------0001111111111-111111111110--0011110111
1gece Gs cgtKVDHAVTAVGYgk sggkgYILIKNSWGP
1gcb IelwnypaigynlpqqkasriryhesLMTHAMLITGChvdetsklplRYRVENSWGK
1gece_dssp -s --s---EEEEEEEEee etteeEEEEE-SB-T
1gcb_dssp Ttsb-ggggt------hhhhhhtts----EEEEEEEEee-ttts-eeEEEEE-SB-T
Similar 10---------------------0001111111111100---000001111111111
1gece GWGENGYIRIRrasgnsPgvcgvYRSSYYpik
1gcb DSGKDGLYVMT qkyfEe yCFQIVVdinelpkelaskftsgkeepivlpiwdp
1gece_dssp TSTBTTEEEEE---s-tT-gggtTS--EEee-
1gcb_dssp TSTBTTEEEEE hhhhHh hEEEEEEegggs-hhhhhhhhss----eee-ttst
Similar 11111111111--000010---0111111000-------------------------
1gece
1gcb mgal
1gece_dssp
1gcb_dssp tss-
Similar ----
1glm atldswLSNEATVARTAILNNIG ADG awv sGA
1clc.2 amnvYEDAFKTAMLGMYLLRCgTSVsatyngihyshgpCHtndayldyingqhtk
1glm_dssp -hhhhhHHHHHHHHHHHHHHTBT TT- tt- tT-
1clc.2_dss -tttTHHHHHHHHHHHHHTB-sS-Eeeeetteeeee----tt--b-tttts---b
Similar --000011111111111111111-111--------000-011---------------
1glm dSGIVVASPstdnpdyFYTWTRDSGLVIKTLVdlf rnG
1clc.2 kdsTKGWHDAG dYNKYVVNAGITVGSMFlawehfkdqlePvaleipeknns
1glm_dssp -TT-B-S-S--sss---SEEHHHHHHHHHHHHhhh htT
1clc.2_dss -----SB--SS s--EEHHHHHHHHHHHHhhhhhshhhhtT---ssggggss
Similar --011111111------01111111111111111000------001-----------
1glm dTDLlSTIEHYISSQAIIQgvsnpsgdlssgglgEPKFN vdeT
1clc.2 iPDFlDELKYEIDWILTMQ ypdgsgr vAHKVStrnfggfimpenehderF
1glm_dssp -GGGhHHHHHHHHHHHHHHh--bttb-ttttggg--EE- tts-
1clc.2_dss s-HHhHHHHHHHHHHHTTB -ttss-- bEEEEE-ss---s--ggg--s--E
Similar 0111011111111111111------0010000-011111--------------0001
1glm AytgswgrpqRDGPALRATAMIGFGQWLLDngYTSAAteIVWPLVRNDLSYVAQYwn
1clc.2 F vpwsSAATADFVAMTAMAARIFRP yDPQYA eKCINAAKVSYEFLKNN p
1glm_dssp B--s--s---THHHHHHHHHHHHHHHHHHHtt-HHHHhhTHHHHHHHHHHHHHHHtt
1clc.2_dss E eee-HHHHHHHHHHHHHHHHHHTT t-HHHH hHHHHHHHHHHHHHHH- -
Similar 1-----000011111111111111111111-011111-01111111111111111-0
1glm QTgy dlweevngssfftIAVQHRALVEGSaFatavgsscswCdsQAPQI
1clc.2 ANvfanqsgfstgeyat vsdADDRLWAAAEMWeTl gdeeYlrDFENR
1glm_dssp S-ee -tts--eeeehhhHHHHHHHHHHHHhHhhhtt---hhHhhHHHHH
1clc.2_dss S------tt--s----- s-sHHHHHHHHHHHHhHh --hhHhhHHHHH
Similar 1100--------00000-----001111111111111011-----000010111111
1glm LCYlqsfwtgsyilanfdssrsgkdt ntllGsihtf dpeagcdDStfq
1clc.2 AAQfs kkieadfdwdnvAnlgmftyllserpgknpalvQS
1glm_dssp HHHhgggb-sssb-sees--s----t hhhhHhhtt- -tt--s-TTtt-
1clc.2_dss HHT-s ss--ss--tt--Hhhhhhhhhh---s---hhhhHH
Similar 11100--------------0000000-0000100000--------000000011---
1glm pcsPRALANHkevvdsfrsiytlndglsdSeavavgrypedsyyngNp WFLCTLAA
1clc.2 ikDSLLSTAdsivr tsqNhgygr tlgttyYwgCNGTVVRQ
1glm_dssp ttsHHHHHHHhhhhhttttt-gggtt--tTs-----s-tt--ggg--- BHHHHHHH
1clc.2_dss hhHHHHHHHhhhhh hhhTstt-- tttt---ttHHHHHHHT
Similar -00111111100000-----------000100000-----00000010-11111111
1glm AEQLYDALYQwdkqgsleitdvsldffkalysgaatgtyssssstyssivSAVKTFA
1clc.2 TMILQVANKI spnNDYVNAA
1glm_dssp HHHHHHHHHHhhhhteeee-ttthhhhhtt-tt--seeeettshhhhhhhHHHHHHH
1clc.2_dss HHHHHHHHHH s--HHHHHHH
Similar 1111111111-------------------------------------0001111111
1glm DGFVSIV etHAA snGSLSe qfdKS d
1clc.2 LDAISHVfgrnyynrsYVTglginppmnphdrrsgadgiwepwpGYLVgggwpGPkd
1glm_dssp HHHHHHH hhHS- tt----s ee-TT t
1clc.2_dss HHHHHHHht-stt---SBTtssss--ss-b-hhhhhss-ss--sS-B-----sSTt-
Similar 1111111-------00111-----------------------0011110-00011-0
1glm GDel saRDLTWSYAALLTANNRrnsvvppswgetsassvpgtcaatsasgty
1clc.2 WVdiqdsyqtnEIAINWNAALIYALAGfvn
1glm_dssp --ee ssSS-HHHHHHHHHHHHHhtt------sgggs----ss----------
1clc.2_dss ----tt-tttsB--HHHHHHHHHHHHTttt
Similar 1100-----001111111111111111000---------------------------
1glm ssvtvtswpsiv
1clc.2
1glm_dssp ------------
1clc.2_dss
Similar ------------
1hbq erdcrvssfrvkenfdkarfA gTwyam akkdPE glfL qdNIVA
1mdc syLgkVyslvkqenfdgflksAGlsddkiqaLvsdKPTQ
1hbq_dssp -----ggg----tt--tttt- eEeeee eee--T t--- -eEEEE
1mdc_dssp --Tt--eeeeeeeshhhhhhtTT--hhhhhhH----EE-
Similar ------------------001-010000-------000011-----0001-001111
1hbq EFSVDenGQMSATAKGrvrllnnwdvcaDMVGTftdtedpAKFKMKYwgvasflqkg
1mdc KMEAN gDSYSNTSTGg ggAKTVS fkSGVEFDDvig agd
1hbq_dssp EEEE-ttS-EEEEEEEeee-tts-eeeeEEEEEeee-sstTEEEEEEeesstts--e
1mdc_dssp EEEET tEEEE---TT- ---EEE- tt--EEEEEttt eee
Similar 11111-01111111110---------0011111-----001111111000----000
1hbq nDDHWIidtdYeTFAVQYSCRllnldgtcaDSYSFVFA rDPSgfspevqkivrqrq
1mdc sVKSMY tvdG NVVTHVVKG daGVATFKKEynGDDlvv t
1hbq_dssp eEEEEEeee-SsSEEEEEEEEee-ttsseeEEEEEEEE sSTT---hhhhhhhhhhh
1mdc_dssp eEEEEE ettE EEEEEEETT eeEEEEEEEEttEEEeee e
Similar 011111-0001-111111111-------0011111111-0111000----------0
1hbq eelclarQYRLIphngycn
1mdc itssnwdGVARRyyk
1hbq_dssp hhtt-tt--EE----sttt
1mdc_dssp etteeeeEEEEEe-?
Similar 000000011111000----
1hdca ndlS GKTVIITgGARGLGA
2dlda.2 pnaiaehaaiqaarvlrqdkrmdekmakrdlrwaptigreVrDQVVGVV GTGHIGQ
1hdca_dssp ---- -SEEEEEtTTSHHHH
2dlda.2_ds hhhhhhhhhhhhhhhhhthhhhhhhhhttb---ss--b--GgGSEEEEE --SHHHH
Similar -------------------------------------0001-1111111-1111111
1hdca EAARQAVAAGARVVLADVLdeeGAATArelgdaaRYQHldvtieedWQRVVayaree
2dlda.2 VFMRIMEGFGAKVIAYDIF kNPELEk kgYYVD sLDDLY
1hdca_dssp HHHHHHHHTT-EEEEEES-hhhHHHHHhttgggeEEEE--tt-hhhHHHHHhhhhhh
2dlda.2_ds HHHHHHHHHT-EEEEE-SS --TTGGg gt-B-S -HHHHT
Similar 1111111111111111111--0111110----001111-------011111------
1hdca fgsVDGLVNNAGistgmfletesverfrkvvEINltgVFIGMKTvipamkdagGGSI
2dlda.2 kqADVISLHVPdv pANVhmiNDKSIAEm kdGVVI
1hdca_dssp hs---EEEE-------s-gggs-hhhhhhhhHHHthhHHHHHHHhhhhhhhht-EEE
2dlda.2_ds tt-SEEEE-S--- tTTTt-bSHHHHTTs -tTEEE
Similar -0011111111100----------------011100011111110------001111
1hdca VNIssaaglmglaltssygAskwgVRGLSKLAAVElgtdrIRVNSVHPgmtytpmta
2dlda.2 VNCs rgRl vDTDAVIRGLDS gKIFGFVMDtyedevgvf
1hdca_dssp EEE--gggts--tt-hhhhHhhhhHHHHHHHHHHHhgggtEEEEEEEE-sb--hhhh
2dlda.2_ds EE-s -gGg b-HHHHHHHHHH tSEEEEEES--sthhhht
Similar 1110-------------0010--011111111111----011111111000000000
1hdca etgirqgegnypntpmgrvgepgeiagavvkllsdtssyvtgAElavdggwttgptv
2dlda.2 nkdweg kefpdkrladlidrpnVLvtphta
1hdca_dssp hht---stts-ttsttss-b-hhhhhhhhhhhhsgggtt--s-Eeeesttttts--h
2dlda.2_ds tsb-tt s----hhhhhhhh-ttEEe-ss-t
Similar 000000--------------------000000000000000011000000-------
1hdca kyvmg
2dlda.2
1hdca_dssp hhhh-
2dlda.2_ds
Similar -----
1hlb ggtlaiqaqgDLTLAQKKIVRKTWHQLmrnktSFVTDVFIRIFAYDPSAQNKFPQMa
1hdab MLTAEEKAAVTAFWGKV kvdEVGGEALGRLLVVYPWTQRFFESFg
1hlb_dssp --tt-s---s-S-HHHHHHHHHHHHHHhhh-tTHHHHHHHHHHHH-THHHHTSGGGt
1hdab_dssp ---HHHHHHHHHHHTT- -hhHHHHHHHHHHHHHSGGGGGG-GGG-
Similar ----------11111111111111111--0001111111111111111111111110
1hlb G mSASQlrssrQMQAHAIRVSSIMSEYVEEldsdILPELLATLARTH dLNKVGAD
1hdab DlsTADAvmnnpKVKAHGKKVLDSFSNGMKHl dDLKGTFAALSELHcdKLHVDPE
1hlb_dssp T --HHHhtt-hHHHHHHHHHHHHHHHHHTT--ttSHHHHTHHHHHHH hHTT--HH
1hdab_dssp --sSHHHhhh-hHHHHHHHHHHHHHHHHHT-t t-HHHHHHHHHHHHhhTT---TH
Similar 1-011110000011111111111111111110--01111111111111-01111111
1hlb HYNLFAKVLMEALQAELGSDFNEKTRDAWAKAFSVVQAVllvkh
1hdab NFKLLGNVLVVVLARNFGKEFTPVLQADFQKVVAGVANAlahry
1hlb_dssp HHHHHHHHHHHHHHHHHTT---THHHHHHHHHHHHHHHT-s---
1hdab_dssp HHHHHHHHHHHHHHHHHGGGS-HHHHHHHHHHHHHHHHHhhtt-
Similar 11111111111111111111111111111111111111100000
1hlb ggtlaiqaqgDLTLAQKKIVRKTWHQLMrnktSFVTDVFIRIFAYDPSAQNKFPQMa
3sdha svydaaaQLTADVKKDLRDSWKVIGsdkkGNGVALMTTLFADNQETIGYFKRLg
1hlb_dssp --tt-s---s-S-HHHHHHHHHHHHHHHhh-tTHHHHHHHHHHHH-THHHHTSGGGt
3sdha_dssp -hhhhhhT--HHHHHHHHHHHHHHTt-hhHHHHHHHHHHHHH-GGGGGGGGGG-
Similar ---000000011111111111111111100001111111111111111111111110
1hlb gmsasQLRSSRQMQAHAIRVSSIMSEYVEE lDSDILPELLATLARTHDLNKVGADH
3sdha nv sQGMANDKLRGHSITLMYALQNFIDQldNPDDLVCVVEKFAVNHITRKISAAE
1hlb_dssp t--hhHHTT-HHHHHHHHHHHHHHHHHHTT --TTSHHHHTHHHHHHHHHTT--HHH
3sdha_dssp -g gGGGG-HHHHHHHHHHHHHHHHHHHTtt-HHHHHHHHHHHHHHHHTTT--HHH
Similar 00--01111111111111111111111111-01111111111111111111111111
1hlb YNLFAKVLMEALQAElgsdFnEKTRDAWAKAFSVVQAvllvkh
3sdha FGKINGPIKKVLASK nFgDKYANAWAKLVAVVQAa
1hlb_dssp HHHHHHHHHHHHHHHhtt---THHHHHHHHHHHHHHHt-s---
3sdha_dssp HGGGHHHHHHHHHHT t--HHHHHHHHHHHHHHHHh
Similar 111111111111111---01011111111111111110-----
1hny.1 QPFTnWYDnGSNQVAFGr gnRGFIVFNN ddWSfSLT LQTGLP 2aaa.1 aadsayitYANDaFYT DSNTIAMAkgtsgsQVITVLSNkgssgSSyTLTlSGSGYT 1hny.1_dss --EEeEEE-SSSEEEEEe ttTEEEEEE- ssS-eEEE EE---- 2aaa.1_dss hh-tttttS--EeEEE ETTEEEEEessttt-EEEEEE-s-tt---eEEEe------ Similar --------11110111-111111110---0011111111---00110111-111111 1hny.1 aGTYCDVIsgdkingnctgIKIYVSDDGKAHFSISnsaedpFIAIHaesk 2aaa.1 sgTKLIEAY tcTSVTVDSSGDIPVPMAs glPRVLLpasvvdsssl 1hny.1_dss sEEEE-TTt--eetteess-EEEE-TTSEEEEEE-tt-ss-EEEEEttsb 2aaa.1_dss tt-EEEETT ttEEEE--TTS-EEEEE-t t--EEEEehhhhttsst Similar -01111111---------0011111111111111110---00111110000------ 1hny.1 2aaa.1 c 1hny.1_dss 2aaa.1_dss t Similar -
1hpt dslGREakcynelngctyeyrPVCG tDGDTYpne cvlcfeNrkrqtSIL
4sgbi PICtnc cagykGCNYysangaFICEGqsdpkkpkacplNc dpHIA
1hpt_dssp --sSB----tt-ss------b-EEE tTS-EEsbh hhhhhhHhhht----
4sgbi_dssp -----t ttsbtT-EEe-tt--EEEE--b-tts---ee--b -tT--
Similar ---111000-------000001111-----011111000---00000010--00111
1hpt IQKsgp
4sgbi YSKcp
1hpt_dssp EEEes-
4sgbi_dssp EEE--
Similar 11100-
1hsta shptYSEMIAAAIRae ksrgG ssRQsIQ KYIkshykVGHNADLQ
2hts arpaFVNKLWSMVNdksnekfihwstsgesIvvpnRErFVqEVLp kyFKHSNFAS
1hsta_dssp ----HHHHHHHHHHt- --ss- eeHHhHH HHHhhhs---TTHHHH
2hts_dssp ---hHHHHHHHHHH-gggttt-ee-ttsssEees-HHhHHhHTHh hh-TT--HHH
Similar 0000111111111100----------00001--0011011-1110--0011111111
1hsta IKLSIRRLlaagvLkqtkg vga sGSFrla
2hts FVRQLNMY gWhkvqdvksgsndsrWEFenerh
1hsta_dssp HHHHHHHHhhttsEeee-- ss- --EEee-
2hts_dssp HHHHHHHT tEe----s-tt-----EEEees--
Similar 11111111----0100000----000-0111000--
1ifc AFDGTWKvdrnenyekfmekmginvvkrklGAhdnLKLTITqegnKFTVK
1epba vkdfdisKFLGFWYeia faskeEK mGAMVVElkenLLALT
1ifc_dssp ---EEEEeeeeeshhhhhhhht--hhhhhhHTt---EEEEEeettEEEEE
1epba_dssp --s--ggGT-EEEEeee eee---- -EEEEEEeettEEEEE
Similar -------1111111000---------------0000011--0111111000011111
1ifc ESS nFRNIDVVFElgvdfaysladgteltGTWTMEg nkLVGKFkrvd
1epba TTYysedhCVLEKVTATegdgpakfqvtrlsgkKEVVVEatdyltyaiIDITSlvag
1ifc_dssp EE- sS-EEEEEEEtt--eeee-tts-eeeEEEEEEt teEEEEEeett
1epba_dssp EEEeetteEEEEEEEEEe-sstteeeeeetteeEEEEEEee-ssseeeEEEEEeett
Similar 111----011111111100000000000000001111110------01111110000
1ifc nGKELIAVreisgne liqtytyegVEAKrifkk
1epba aVHRTMKLysrslddngealynfrkitsdhgfsetDLYIlkhdltcvkvlqsa
1ifc_dssp t--EEEEEeeeette eeeeeeettEEEEeeeee
1epba_dssp eEEEEEEEees-ss--hhhhhhhhhhhhhtt--ggGEEE-----hhhhhhhh-
Similar 011111110000000-----------000000000111100000---------
1ihslh geadcglrplfekksledkterellesyiivegsdaeigmspWQVMLFRkspqelLC
2alp anivGGIEYSInna sLC
1ihslh_dss --tttt--tttgggt---tthhhhhhh---bs-ee--tts-tTEEEEEEtttteeEE
2alp_dssp -eeeET-EEEEttt eEE
Similar --------------------------------------00001111111000--011
1ihslh G ASLI sdrWVLTAAHCllyppwdkNftenDLLvrigkhsrtryerniekiSMl
2alp SvGFSVtrgatkGFVTAGHC gTvn aTARi ggaVVg
1ihslh_dss E EEE- sssEEEE-GGGteegggteE--ggGEEeees--bsss--ttt-eeEEe
2alp_dssp E--EEEeetteeEEEE-GGG --tt -EEEe tteEEe
Similar 1-1111---00011111111-------0101-01110--------------000110
1ihslh ekiyihpRYnwrenlDRDIALMKLKKPVAfsd yihpVCLpdretaaslLQA
2alp t faarVF pGNDRAWVSLTSAQTllprvangssfvtVRGs teAAV
1ihslh_dss eeeee-tT-btttt-BT--EEEEESS----bt tb---B---hhhhhhh--T
2alp_dssp e eeeeE- sBS-EEEEEE-TT-Eeeeeeeetteeee--B- ----T
Similar 0--000011-----011111111111111000------00001110------00111
1ihslh GYKGRVTGwgnlketwtanvgkgqpsvlQVVNLPIVErpvckdstr iriTdnMF
2alp GAAVCRSGr ttGYQCGTITAkn vtanyaegavR gLT
1ihslh_dss T-EEEEEEs--ssttt-ssttsss-sb-EEEEEEB--hhhhhtt-s s---ttEE
2alp_dssp T-EEEEEEt ttEEEEEEEEEee eeeeetteeeE eEE
Similar 111111110-----------------0011111111100---0000---0001-011
1ihslh CAgykpdegkrgDACEGDSGGPFVMKspfnnrWYQMGIVSWGEgc drdG
2alp QG naCMGRGDSGGSWITS aGQAQGVMSGGNvqsngnncgipasQ
1ihslh_dss EE---gggs---B--TT-TT-EEEEE-ttt--EEEEEEEEE-Sss s-tT
2alp_dssp EE ----BTT-TT-EEE-T tSBEEEEEEEE---ttsbstts-ggG
Similar 11--------0011111111111111-----01111111111100--------0001
1ihslh KYGFYTHVFRLKKWiQKvidQf
2alp RSSLFERLQPILSQ YGlslVt
1ihslh_dss --EEEEETGGGHHHhHHhhhHh
2alp_dssp --EEEEEHHHHHHH HT-ee--
Similar 11111111111111-1100011
1ilr1 skmqAFRIWD VNQKTFYL rnnQLVAGYlqgpnVNL eEKIDVVPIEPHALFLGIH
4fgf PKRLYCkNGGFFLRIhpdgRVDGVR eKSDphIKLQLQAEERGVVSIKGV
1ilr1_dssp ---eEEEEEE TT--EEEE ettEEEEE---gggGGG ---EEEEEETTTEEEEEET
4fgf_dssp -BEEEEtTTTEEEEE-tts-EEEE- -TT-ggG-EEEEEEETTEEEEEET
Similar ----111111-11111111-001111111----0111-0111111111111111111
1ilr1 ggkMCLSCVksgdETRLQLEAvnitdlsenrkqdKRFAFIRS DSGPTTSFESAACP
4fgf canRYLAMK eDGRLLASK cvtDECFFFERlESNNYNTYRSRKYT
1ilr1_dssp tttEEEEEEeettEEEEEEE---ggg--tt-gggGGGEEEEE EETTEEEEEESSST
4fgf_dssp tttEEEEE- tTS-EEEES s--GGG-EEEEe-TTS-EEEEESSST
Similar 000111111---011111111----------00011111111-11111111111111
1ilr1 GWFLCTAMEadqpvSLTNM PDegvmVTKFYFqed
4fgf SWYVALKRTg qykLGSKTgPGq kAILFLPm
1ilr1_dssp T-EEEEESSttee-EEES- SSssseE--EEEee-
4fgf_dssp T-B--B-TTs bb--GGG--TT- gGG-EEEe
Similar 1111111110-00011111-110--01111110--
1irk ssvFvpdewevsrekITLLRELGQGsfGMVYEGNardiikg
2cpke vkeflakakedflkkwetpS qntaqldqFDRIKTLGTGsfGRVMLVKh k
1irk_dssp ------gggb--gggEEEEEEEEE-ssSEEEEEEeeeeett
2cpke_dssp -hhhhhhhhhhhhhhhhs-- -----gggEEEEEEEEE-ssEEEEEEEe t
Similar ----------------0001---0001000011111111110011111110-----0
1irk eaETRVAVKTVnesaslr erieflneASVMKGFTCHHVVRLLGVvskgqptLVVM
2cpke esGNHYAMKILdkqkvvklkqiehtlneKRILQAVNFPFLVKLEFSfkdnsnlYMVM
1irk_dssp eeEEEEEEE---tt--hh hhhhhhhhHHHHTT---TTB--EEEEe-ssss-EEEE
2cpke_dssp ttTEEEEEEEEehhhhhhtt-hhhhhhhHHHHHH---TTB--EEEEee-sseeEEEE
Similar 001111111110000000--0000000011111111111111111100000001111
1irk ELMAHGDLKSYLRSLrpeaennpgrppPTLQEMIQMAAEIADGMAYLNAKKFVHRDL
2cpke EYVAGGEMFSHLRRI grFSEPHARFYAAQIVLTFEYLHSLDLIYRDL
1irk_dssp E--TT-BHHHHHHHTstt-tt--s--s--HHHHHHHHHHHHHHHHHHHHTT---S--
2cpke_dssp E--TT-BHHHHHHHH ----HHHHHHHHHHHHHHHHHHHHTTEE----
Similar 111111111111111----------00111111111111111111111111111111
1irk AARNCMVAHDFTVKIGDfgmtrdiyetdyyrkggkgllPVRWMAPESLKDgVFTTSS
2cpke KPENLLIDQQGYIQVTDfgfakr vkgrtwtlcgTPEYLAPEIILSkGYNKAV
1irk_dssp SGGGEEE-TT--EEE---s-sssttggg-eegggssee-GGG--HHHHHH----HHH
2cpke_dssp SGGGEEE-TTS-EEE---tt-ee -ss-b----b-GGG--HHHHTT--B-THH
Similar 11111111111111111000000-----00000000001111111111110111111
1irk DMWSFGVVLWEITSlaEQPYqglSNEQVLKFVMDGGyLDQPDNCPERVTDLMRMCWQ
2cpke DWWALGVLIYEMAA gYPPFfadQPIQIYEKIVSGK VRFPSHFSSDLKDLLRNLLQ
1irk_dssp HHHHHHHHHHHHHHts--TTtts-HHHHHHHHHTT------SS--HHHHHHHHHHT-
2cpke_dssp HHHHHHHHHHHHHH sS-SS--sSHHHHHHHHHH-- ----TTS-HHHHHHHHHHS-
Similar 11111111111111-011110001111111111111-11111111111111111111
1irk FNPKMR pTFLEIVN llkDDL hpsFPEVSFFHSEEn
2cpke VDLTKRfgnlknGVNDIKNhkwfATTdwiaIYQRKVEAPFIpkfkgpgdtsnfddye
1irk_dssp SSGGGS --HHHHHH hhgGGS -ttHHHH-STTSTT-
2cpke_dssp S-GGG-tttsttTTHHHHTsgggGG--hhhHHTT-S--SS-----stt--tts----
Similar 111111-----01111111-001111-000111111111110---------------
1irk
2cpke eeeirvsinekcgkefte
1irk_dssp
2cpke_dssp -------ss--stttttt
Similar ------------------
1ldm.1 atlkdklighlatsqeprsyNKITVV GVGAVGMACAISILMKDlADEVALVDvmed 1scua.1 silidknTKVICQgFTGSQGTFHSEQAIAYG TKMVGGVT pg 1ldm.1_dss --hhhhh----s-------sSEEEEE --SHHHHHHHHHHHHTT--SEEEEE-s-hh 1scua.1_ds --s--tt-EEEEEtTTSHHHHHHHHHHHHHT -EEEEEE- tt Similar -------------0000000111111-11111111111111111-11111111--00 1ldm.1 klKgemMDlqhgslflhtakIVSGKD YSV saGSKLVVITAgarqqegesrlnlv 1scua.1 kgG tTH lgLPVFNTvREAvaatGATASVIYV pa 1ldm.1_dss hhHhhhHHhhttggg----eEEE-SS GGG gtT-SEEEE--s----tt--ggggh 1scua.1_ds -tT -EE ttEEEES-hHHHhhhh---EEEE-- -h Similar 011--011----------00111111-111--00111111111------------00 1ldm.1 qRNVNIFKFIIPnivkhspdCIILVVSNP vdvltYVAWKL sgLpmhrII 1scua.1 pFCKDSILEAIDa giKLIITITEGiptldmLTVKVKldeaGv rMIg 1ldm.1_dss hHHHHHHHHHHHhhhhh-tt-EEEE-SSS hhhhhHHHHHH h---gggEE 1scua.1_ds hHHHHHHHHHHHh t-SEEEE------hhhhHHHHHHhhhhT- eEE- Similar 1111111111110-----00111111111-00000111111--0010--011-
1lib CDAFVGTWKlvssenfddymkevGvgfatrkvagmaKPNMI
1rbp erdcrvssfrvkenfdKARFSGTWYama kkdpeGlf lqdNIVAE
1lib_dssp -GGG-EEEEeeeeeshhhhhhhhT--hhhhhhhhhh--EEE
1rbp_dssp -----ggg----tt--TTTT-EEEEeee ee--sS-- --eEEEEE
Similar ----------------111111111000------00000100-------00011111
1lib ISV NGDLVTIRSES tFKNTEISFK lGVEFDEit addrkVK
1rbp FSVdETGQMSATAKGrvrllnnwdvCADMVGTFTdtedpaKFKMKYwgvasflqkGN
1lib_dssp EEE ETTEEEEEEE- sS--EEEEE- tT--EEEe- tt--eEE
1rbp_dssp EEE-TTS-EEEEEEEeeeettteeeEEEEEEEEEe-ssttEEEEEEeesstts--EE
Similar 111-11111111111---------0111111111-----011111100--0000011
1lib SIITLD ggalVQVQKW dgKSTTIKRkrdgdkl vve
1rbp DDHWIVdtdydtyaVQYSCRllnldgtcaDSYSFVFsrdpnglppeaqkivrqrqee
1lib_dssp EEEEEE tteeEEEEEE ttEEEEEEEeeettee eee
1rbp_dssp EEEEEEee-ssseeEEEEEEee-ttsseeEEEEEEEesstt---hhhhhhhhhhhhh
Similar 111111----0000111111-------0011111110000000-----------000
1lib cvmkGVTSTRVYEr
1rbp lclaRQYRLIVHNgy
1lib_dssp eeetTEEEEEEEEe
1rbp_dssp tt-tT--EE----s-
Similar 00001111111110-
1lmb3 pltqeqleDARRLKAIYEKKknelGLSQESVADKMGMGQSGVGALFNGINALNayNA
2cro mqtLSERLKKRRIAL KMTQTELATKAGVKQQSIQLIEAGVTKRP rFL
1lmb3_dssp ---hhhhhHHHHHHHHHHHHhhhhT--HHHHHHHHTS-HHHHHHHHTTSS---hhHH
2cro_dssp --sHHHHHHHHHHHT T--HHHHHHHHTS-HHHHHHHHTT--SS- tTH
Similar -----000111111111111----11111111111111111111111111111-011
1lmb3 ALLAKILKVSVEEFspsiareiyemyeav
2cro FEIAMALNCDPVWLqyg
1lmb3_dssp HHHHHHHTS-GGGT-hhhhhhhhhhhttt
2cro_dssp HHHHHHTTS-HHHHhh-
Similar 11111111111111000------------
1lte vetisfsfsefepgndnltlqgaSLitqsgvLqlTKinqngmpawDSTGRTLYakPV
1xyn asinydqnyqtggqvsYSp sntgF sVNwn tqdDFVVGVGW tTG
1lte_dssp -eeeeeeess--tt-tteeeeet-Ee-tts-EesS-b-tts-b-sS-EEEEEEss-E
1xyn_dssp ----eeeeee-sseeeEEe -sseE eEEee ess-EEEEEEE sS-
Similar -------0000000000000000110-00001-01100----00011111111-011
1lte hiwdmttgtvaSFETRFSFSIEQpytrplPADGLVFFMGptkskpaqgygylgifnq
1xyn sSAPINFGGSFSV nsGTGLLSVYGWs
1lte_dssp e-b-ttt--b-EEEEEEEEE-----sss---EEEEEEEEstt----b-gggtttbss
1xyn_dssp -SS-EEEEEEEEE ssSEEEEEEEEEe
Similar ----------0111111111111----0011111111110-----------------
1lte skqdnsYQTLGV eFDTFSnpwd ppqvphigIDvns ir
1xyn tnpLVEYYImeDNHNYpaqgtvkgtvtsdgatytIWentrvnepsiqgtatfnq
1lte_dssp s---ggG--EEE eEE-S--tts -s-sseeeEEess ss
1xyn_dssp ettTEEEEEeeEEES----seeeeeeeetteeeeEEeeeeeeeeetteeeeeee
Similar ---000111111-0111110000------0000000011000-------------00
1lte siKTQPfqldngqvaNVVIKYdasskllhavlvypssgaiytiaeivdvkqVLPEWV
1xyn yiSVRNs prtSGTVTVqnhfn awaslglHLGQMN
1lte_dssp -sEEEE----tt--eEEEEEEetttteeeeeeeetttteeeeeeee--hhhHS-SEE
1xyn_dssp eeEEESs --sSEEE-Hhhhhh hhhhtt----EEE
Similar 0011110-----00011111100000------------------0000000111111
1lte DVGLSGATgaqrdAAETHDvYSWSfqaslp
1xyn YQVVAVEG wgGSGSAS QSVS
1lte_dssp EEEEEEEE-sstt-----EeEEEEeeeee-
1xyn_dssp EEEEEEEE esEEEEEE EEEE
Similar 11111111---00111111-1111------
1ltsd apqtitelCseyrntqIYTinDKILSYTEsmagkreMVIITFKSGETFQVevp
1tssa.1 stndnikdlldwY ssgSDT fTNSEVLDNs lgSMRIKNTDGSISLIi
1ltsd_dssp --sshhhhHhtstteeEEEeeE--SEEEEe-stt--EEEEE-TTS-EEEE---
1tssa.1_ds ---hhhhhhhhhH hs--EE eEEEEEEE-- ttEEEEE-TTS-EEEEe
Similar ----000000001----000111-0111111110----00111111111111110--
1ltsd gsqhidsqkkaIERMkdtlrityltETKIdKLCVWNNk tPNSIAAIsmk
1tssa.1 fpSPYYspa ftkgeKVDL NTKRTKKsqhtsegtyIHFQISGvtnt
1ltsd_dssp -tts-tthhhhHHHHhhhhhhhhhtT--EeEEEEE-Ss sSEEEEEEeee
1tssa.1_ds ---SS---- --tt-EEEE EEEEEEEeeeettteeEEEEES-ee--
Similar ---------001111000--000001111-11111110-------01111111000-
1ltsd
1tssa.1 e
1ltsd_dssp
1tssa.1_ds -
Similar -
1mlda.1 AKVAVLgASGGIGQPLSLLLKNSPLVSRLTLYDI a 1ldm.1 atlkdklighlatsqeprsyNKITVV GVGAVGMACAISILMKDLADEVALVDVmed 1mlda.1_ds -EEEEEtTTSTTHHHHHHHHHT-TT-SEEEEEES s 1ldm.1_dss --hhhhh----s-------sSEEEEE --SHHHHHHHHHHHHTT--SEEEEE-S-hh Similar --------------------111111-111111111111111111111111111--0 1mlda.1 HTPGVAADLSh iETR ATVKGylgpeQLPdCLKGCDVVVIPAGVPRKPGMTRDDL 1ldm.1 KLKGEMMDLQhgslFLHtAKIVS gkDYS VSAGSKLVVITAGARQQEGESRLNL 1mlda.1_ds SHHHHHHHHTt sSSS -EEEEeesggGHHhHHTT-SEEEE--S----TT--GGGG 1ldm.1_dss HHHHHHHHHHttggG----EEEE -sSGG GGTT-SEEEE--S----TT--GGGG Similar 11111111110--0111-11111---00111-1111111111111111111111111 1mlda.1 FNTNATIVATLTAACAQHCPDAMICIISNPVNSTIPITAEVfkkhgvYNPNKIF 1ldm.1 VQRNVNIFKFIIPNIVKHSPDCIILVVSNPVDVLTYVAWKL sgLPMHRII 1mlda.1_ds HHHHHHHHHHHHHHHHHH-TTSEEEE-SS-HHHHHHHHHHHhhhtt---TTSEE 1ldm.1_dss HHHHHHHHHHHHHHHHHH-TT-EEEE-SSSHHHHHHHHHHH h---GGGEE Similar 11111111111111111111111111111111111111111----001111111
1mnp avcpdgtrvshaACCAFIPLAQDLQEtif qnecgEDAHEVIRLTFHDAIAIS
2cyp tplvhvasvekgrSYEDFQKVYNAIALklreddeydnyiGYGPVLVRLAWHTSGTWD
1mnp_dssp ---tts---ssgGGGGHHHHHHHHHHhht ttsssHHHHHHHHHHHHHHH---
2cyp_dssp -----b----tt--HHHHHHHHHHHHHhhhhstthhhht-SHHHHHHHHHHHHTT-B
Similar -00000000000011111111111111000----00000111111111111111111
1mnp RsqGPkagGG aDGSMllfPTVEPNFSANNGIDDSVNNLIPFMQKHNTISAADLVQF
2cyp K hDN tGGsyGGTY rFKKEFNDPSNAGLQNGFKFLEPIHKEFPWISSGDLFSL
1mnp_dssp Ttt-Ggg--S sS-HHhhsTTTGGGSGGGTTTHHHHHHHHHHHHHSTTS-HHHHHHH
2cyp_dssp T tTT bSSstT-GG gSHHHHT-GGGTTTHHHHHHHHHHHHH-TTS-HHHHHHH
Similar 1-011--011-01111--011111111111111111111111111111111111111
1mnp AGAVALSNCpGAPRLEFLAGRPn ktIAAVDGLIPEPQDSVTKILQRFEDaGGFTP
2cyp GGVTAVQEM QGPKIPWRCGRVdtpedTTPDNGRLPDADKDADYVRTFFQR LNMND
1mnp_dssp HHHHHHTTStT------EE---s ------TT-S--TT--HHHHHHHHHHhH---H
2cyp_dssp HHHHHHHHT T-----B--------ggG---S--S--SS--HHHHHHHHHT TT--H
Similar 111111111-1111111111110--00111111111111111111111111-11111
1mnp FEVVSLLASHSVARA dKVdqtidaAPFDSTPFTFDTQVFLEV lLKGvgfpgsa
2cyp REVVALMGAHALGKThlknSG yeGPWGAANNVFTNEFYLNLlnEDWk leknd
1mnp_dssp HHHHHHGGGGGG-EE sSSstt---EESSS-TTS-SSHHHHHH tB---b-ss-s
2cyp_dssp HHHHHHHGGGGSSEE-hhhHS --EESSS-TTS-SSHHHHHHhhS-Ee eee-t
Similar 111111111111111---011----00111111111111111111-01110-00000
1mnp nnTgEVASPLplgsgsdtgEMRLQSDFALAHDPRTACIWQGFVNEQAFMAASFRAAM
2cyp anNeQWDSKS gYMMLPTDYSLIQDPKYLSIVKEYANDQDKFFKDFSKAF
1mnp_dssp --TtEE-BS----bttb----EEHHHHHHHHSTTTHHHHHHTTT-HHHHHHHHHHHH
2cyp_dssp ts-eEEEETT s-EE-HHHHHHHHSHHHHHHHHHHHT-HHHHHHHHHHHH
Similar 0110111111--------011111111111111111111111111111111111111
1mnp SKLAVLGHNR nsL iDCsdvvpvpKPAtgqpamfpastgpqdlelscpserfptlt
2cyp EKLLENGITFpkdApsPFif ktlEEQg
1mnp_dssp HHHTTTTS-G ggS eE-gggs------------b-tt--gggb----tts------
2cyp_dssp HHHHHTT-B--ttS---B-- --hHHHt
Similar 1111111111-001-01100--0001110----------------------------
1mnp tqpgasqsliahcpdgsmscpgvqfngp
2cyp
1mnp_dssp b-s-ss-----sstts-s----------
2cyp_dssp
Similar ----------------------------
1nnc rdfnnltkglctinswhiygKDnavrigeds dvL VTREPY
2sil tveKSv vfkaegehftdqkgntivgsgsggtTkYFRIPA
1nnc_dssp ---------b---seeeeeeE--hhhhhtss -bE EEEEEE
2sil_dssp --sEEe ee-tt----b-tts-b---sbgggb--EEEEEE
Similar -----------------000110-0000000----------------001-111111
1nnc VSCDP DECRFYALSQgttirgkhsngTIHDRSqYRALISW plSSpptvynSR
2sil MCTTSkGTIVVFADARh nTASDQS FIDTAAArstdggKT wnKK
1nnc_dssp EEE-S S-EEEEEEEEeeesssgggttTT-S--tT-EEEEE etTS--bttt-E
2sil_dssp EEE-Tt--EEEEEEEEs s-S-SSS -EEEEEEeessssSS -eEE
Similar 11111-11111111110---------0111111-1111111----0011----0011
1nnc VEC iGWSSTSCHD gKTRMSICISgp nnNA
2sil IAIyndrvnsklsrVMDPTCIVAniqgrETILVMVGKwnnndktwgayrdkapdtDW
1nnc_dssp EEE e-SEEEEEE- sS-EEEEEEEs- ttS-
2sil_dssp EEE----ssttt-eEEEEEEEEEeetteEEEEEEEEEess--s-ggg--ssss-tT-
Similar 111----------0111111111----011111111100--------------0011
1nnc SAVIWY nRRPVTeInt warnILRTQESECVC HnGVCPVVFTDg
2sil DLVLYKstddgvtfSKVETnIhdivtkngtisAMLGGVGSGLQlNdGKLVFPVQMvr
1nnc_dssp EEEEEE tTEEEEeEe- ssss--B--SS---- BtTEEEEEEEEs
2sil_dssp EEEEEEesstts--EE---sHhhhhhhh-seeEEEE-SEE-EE-TtS-EEEEEEEee
Similar 111111-------0111110100-----000011111111111-101111111110-
1nnc satgPAETRIYYFKEgkiLKWEPLAgtaKH iEECSCYGeraeITCTCRdnwqgS
2sil tknittVLNTSFIYSTDgitWSLPSGY cEGfgSENNIIEfnasLVNNIR nsG
1nnc_dssp -sss--EEEEEEEETteeEEEEE--ss-S- -EEEEEEEetteEEEEEE--ss-S
2sil_dssp -ttss-SEEEEEEEESSsssEE--S-- eE-tt--EEEEE-ss-EEEEE- -sS
Similar --0000111111111110001111111--011-011111110000111111---001
1nnc NRPVIRidpvamthtSQ yiCspvLTdnprpndptvgkcndpypgnnnNGVKGFS
2sil LRRSFEtkd fgktWTefppmDk kVDn rnHGVQGST
1nnc_dssp S-EEEEeetttteeeEE e---ss--sss-----ss--sss---s--s------E
2sil_dssp B-B-EEess tts--Ee-tttTt --B- -tT----EE
Similar 111111000--000011---0010-0110-------------------001111111
1nnc yl dgvnTWLGRTISI aSRSGYEMLKVpnaLtddkskpTqGQTIVlntDW
2sil itipsgnklvAAHSSAQNKnndyTRSDISLYAH nLys gevKlIDDFY pKVg
1nnc_dssp e- -tts-EEEE-S-S sSSEEEEEEE-tttTt-tt---SeEEEEEeeeEE
2sil_dssp eeeeetteeeEEEEEE--TtsstT---EEEEEE -Ttt --eEeEEEEE -S--
Similar 00----0000111111111---01111111111--0100--0001011111--011-
1nnc sGYSGSFMDywaegecyRACFYVELirgrpkedkvwwtSNSIVs mcSStEF
2sil nasgaGYSCLSYRkn vdkeTLYVVYEA nGSIEFqdlsrHL PV
1nnc_dssp ---EEEEE-ttsssssb-EEEEEEEeeetttsttss-eEEEEEe eeEEsS-
2sil_dssp -tts---EEEEEEee tteeEEEEEEEE tTEEEEee-ggGH HH
Similar ----01111111100--000011111111------------0111110--0011-11
1nnc lgqwdwpdgakieyf
2sil iksy
1nnc_dssp -----------gggg
2sil_dssp hht-
Similar 0000-----------
1npx.1 mKVIVLGSSHGGYEAVEELLNlhPDAEIQWYEKGD FIS fLScgmqlylegk 1pbe.1 mktQVAIIGAGPSGLLLGQLLHK AGIDNVILERQTpdYVLgrIRagvleqgmvdl 1npx.1_dss -EEEEE-SSHHHHHHHHHHHHh-TTSEEEEEESSS SSS b-Ggghhhhhtts 1pbe.1_dss -b-SEEEE--SHHHHHHHHHHHH TT--EEEE-SS-hhHHHt-----eeehhhhhh Similar --011111111111111111111--111111111111--111-0110000000000- 1npx.1 vkdvnsvrymtGeK 1pbe.1 lreagvdrrmardglvhegveiafagqrrridlkrlsggktvtvygqtevtrdlMeA 1npx.1_dss s--gggsbs--HhH 1pbe.1_dss hhhtt--hhhhhh-eeeseeeeeetteeeeeehhhhtts--eee--hhhhhhhhHhH Similar -------------------------------------------00000000000101 1npx.1 MESRGVNVFSNTEiTAI QPK EHQVTVKdlvSGEERVENYDKLIISPGavpfeld 1pbe.1 REACGATTVYQAAeVRLhDLQgeRPYVTFE rDGERLRLDCDYIAGCDGfhg 1npx.1_dss HHHTT-EEEETEEeEEE ETT TTEEEEEettT--EEEEE-SEEEE---eee---- 1pbe.1_dss HHHHT-EEETT-EeEEEe-TTssS-EEEEE eTTEEEEEE-SEEEE---tt- Similar 11111111111110111-111--1111111--011111111111111111000---- 1npx.1 gvrpntawlkgTLElhpngliktdeymrtsEPDVFAVGDATlikynpadtevnI 1pbe.1 isrqSIPae rmqHGRLFLAGDAA hiVppt 1npx.1_dss -eees-gggttTS-b-tts-b---tt-b-sSTTEEE-GGGS-eeegggteee-- 1pbe.1_dss hhhhTS-gg gseETTEEE-GGGT ee--gg Similar -------000011100-----------00011111111111----------001--- 1npx.1 aLATNARKQGRFAVKNl eePvkpf 1pbe.1 gakGLNLAASDVSTLYRLllkayregrgellErysaiclrriwkaerfswwmtsvlh 1npx.1_dss --HHHHHHHHHHHHHTs ss----- 1pbe.1_dss gs-HHHHHHHHHHHHHHHhhhhhhs--ggggGghhhhhhhhhhhhhhhhhhhhhhhs Similar --01111111111111110----------0010000--------------------- 1npx.1 1pbe.1 rfpdtdafsqriqqteleyylgseaglatiaenyvglpy 1npx.1_dss 1pbe.1_dss --ss--hhhhhhhhhhhhhhtt-hhhhhhhhhhhh---- Similar ---------------------------------------
1npx.3 gvQGSSGLAvfDYKFASTGINEVMAqklGK eTKAVTVVEDYlmd fnpdkQKAW 1gera.1 ysNIPTVVF sHPPIGTVGLTEPQAr eQYgddqVKVYKSSFTAmytavtthrQPCR 1npx.3_dss -b---EEEEetTEEEEEEE--HHHHhhhT- --EEEEEEEESs-t t-tt--EEE 1gera.1_ds -sS--EEE- -SS-EEEEE--HHHHh hHH-tttEEEEEEEEE-hhhhtsss--EEE Similar 001111111-0111111111111111-011---01111111111000-000001111 1npx.3 FKLVYDPETTQILGAQLMsKADLTANINAISLAIQAKMTIEDLAYADFFfqpafdkp 1gera.1 MKLVCVGSEEKIVGIHGI GFGMDEMLQGFAVALKMGATKKDFDNTVAI h 1npx.3_dss EEEEE-TTT-BEEEEEEEeSS--TTHHHHHHHHHHTT-BHHHHHT------ttt--s 1gera.1_ds EEEEEETTTTEEEEEEEE STTHHHHHHHHHHHHHHT-BHHHHHTS--- t Similar 111111111111111111-111111111111111111111111111111-------0 1npx.3 wNIINTAALEavkqe 1gera.1 pTAAEEFVTM 1npx.3_dss s-HHHHHHHHhhhht 1gera.1_ds t-SGGGGGS- Similar 0111111111-----
1otfa PIAQLYIieg rtdeqKETLIRQVSEAMANSlDAPLERVRVLITEMpknHFGIggEP
1otga PHFIVECsdnireeadLPGLFAKVNPTLAATgIFPLAGIRSRVHWV dTWQM aDG
1otfa_dssp -EEEEEEes- --hhhHHHHHHHHHHHHHHHhT--GGG-EEEEEEE-ggGEEEttEE
1otga_dssp -EEEEEEeggghhhhtHHHHHHHHHHHHHTTsSS-GGG-EEEEEEE sSEEE tTS
Similar 1111111000-00000111111111111111011111111111111--01111-011
1otfa as
1otga qhdyafvhmtlkigagrslesrqqagemlfelikthfaalmesrllalsfeieelhp
1otfa_dssp tt
1otga_dssp -s-eeeeeeeeee-tt--hhhhhhhhhhhhhhhhhhthhhhttseeeeeeeeee--s
Similar 00-------------------------------------------------------
1otfa
1otga tlnfkqnnvhalf
1otfa_dssp
1otga_dssp sseeeeeggggg-
Similar -------------
1pdz.1 SITKVFARTIF dsrGNPTVEVDLYT SKGLFRAAVPsgastgv 2mnr.1 evLITGLRTRAVNvplaypvhtavgtvgTAPLVLIDLATsAGVVGHSYLFayt 1pdz.1_dss ---EEEEEEEE -ttS-EEEEEEEEE TTEEEEEE----bss-s 2mnr.1_dss --BEEEEEEEEEEe--ss-eeetteee-SEEEEEEEEEEtTS-EEEEEEE-ss Similar --11111111111------------00011111111111-1111111111000---- 1pdz.1 healemrdgdkskyhgkSVFNAVKNVNdVIVPEIiksGLKvtQQKECDEFMCKLD 2mnr.1 pvALKSLKQLLD DMAAMI vNEP lAPVSLEAMLAKRFcl 1pdz.1_dss ss-b------ttsgggt--HHHHHHHHhTHHHHHhhhT--tt-HHHHHHHHHHHH 2mnr.1_dss ggGHHHHHHHHH HHHHHH tTSB s-HHHHHHHHHHHTtt Similar ---------------001111111111-111111--0111-01111111111111-- 1pdz.1 gTENKsslGANAILGVSLAICKAGAAELGIPLYRHianlan 2mnr.1 aGYTG lIRMAAAGIDMAAWDALGKVHETPLVKLlgana 1pdz.1_dss -SSSSttt-HHHHHHHHHHHHHHHHHHTTS-HHHHhhhhtt 2mnr.1_dss t-SSH hHHHHHHHHHHHHHHHHHHHTTSBHHHHtt--- Similar 01111--011111111111111111111111111100000-
1pkm.1 iqtqqlhaamadtflehmcrldidsppiTa rntGIICTig p
4xiaa vQptpadHFTFGlwtvgwtgadpfgvatra
1pkm.1_dss --stthhhht-sshhhhhht--tts---S- --sEEEEE-- t
4xiaa_dssp ----ggg-EEEEhhhhh----bttb--ss-
Similar ---------------------------010-0001111100---------------0
1pkm.1 aSRSVEILKEMIKSGMNVARLNFsh gth eyhaETIKNVRAATESfasdpiry
4xiaa nLDPVEAVHKLAELGAYGITFHDndlipfdataaereKILGDFNQALAD t
1pkm.1_dss tT--HHHHHHHHHTTEEEEEEETts s-h hhhhHHHHHHHHHHHTtttsttt-
4xiaa_dssp ---HHHHHHHHHHHT--EEEEEHhhhs-tt--hhhhhHHHHHHHHHHHH h
Similar 0111111111111111111111100-000----0000111111111111-------0
1pkm.1 RPVAVALDT kgp avsEKDIQDLKFGVEQ dVDMVFASf
4xiaa GLKVPMVTTnlfshpvfkdggftsndrsirRFALAKVLHNIDLaaemgAETFVMWgg
1pkm.1_dss ---EEEEE- --- ss-HHHHHHHHHHHHT t-SEEEES-
4xiaa_dssp --EEEEEE---sssgggtt-stt-sshhhhHHHHHHHHHHHHHhhhtt-SEEEE--t
Similar 111111111----------000-----0001111111111111----011111110-
1pkm.1 irkasdVHEVRKVLGEkgKNIKIISKIE nhe gV
4xiaa regseydgskdlaaaldrmregVDTAAGYIKDkgYNLRIALEPKpneprgdiflptV
1pkm.1_dss --shhhHHHHHHHHTTttTTSEEEEEE- ssh hH
4xiaa_dssp t-eessggg--hhhhhhhhhhhHHHHHHHHHHht---EEEE---sssssseess-sH
Similar ----------------0000001111111111001111111111------000--01
1pkm.1 RRFDEIlea sdGIMVArgdLgieipaekvflaQKMMIGRCNRAG kPVIca
4xiaa GHGLAFieqlehgdivGLNPEtghEqma glnFTHGIAQALWAEklfHIDln
1pkm.1_dss HTHHHHhhh ssEEEEEhhhHhhhs-ttthhhhHHHHHHHHHHHT --EEee
4xiaa_dssp HHHHHHhtt-ttgggeEE--BhhhHhtt t--HHHHHHHHHHTT-b---Ee-
Similar 111111000-----00111110001000------000111111111111--011100
1pkm.1 tqmlesmikkprptraegsdVANAVld gadCIMlsge takgdy
4xiaa gqrgikydqdlvfghgdltsAFFTVdllengfpnggpkytgprHFDykpsrtdgydg
1pkm.1_dss ssssggggt-ss--hhhhhhHHHHHhh t-sEEEeshh hht-s-
4xiaa_dssp b--ssss---b-ttss-hhhHHHHHhhhhh--tt------s-eEE-----tts-hhh
Similar 000000000000000000001111100-------------0001110000-000000
1pkm.1 PLEAVRMQHLIAREAEAA mfhrklf
4xiaa VWDSAKANMSMYLLLKERalafradpevqeamktsgvfelgettlnagesaadlmnd
1pkm.1_dss HHHHHHHHHHHHHHHHHT s-hhhhh
4xiaa_dssp HHHHHHHHHHHHHHHHHHhhhhhh-hhhhhhhhhttttgggs-ss-tt--hhhhht-
Similar 111111111111111111--0000000------------------------------
1pkm.1
4xiaa sasfagfdaeaaaernfafirlnqlaiehllgs
1pkm.1_dss
4xiaa_dssp tttttt--hhhhtt----hhhhhhhhhhhhtt-
Similar ---------------------------------
1plq.1 mLEAKfeEASLFKRIIDGFKDC vQLVNFQCKEDGIIAQAVddsRVLLV 2pola.1 MKFT vEREHLLKPLQQVSGPlggrptlpilGNLLLQVADGTLSLTGT dLEMEM 1plq.1_dss -EEEEesSHHHHHHHHHHHTTT -SEEEEEEETTEEEEEEE-ttSSEEE 2pola.1_ds -EEE eEHHHHHHHHHHHTSS--s---sgggGEEEEEEETTEEEEEEE -SSEEE Similar -1111-0111111111111111---------011111111111111111--011111 1plq.1 SLEIGveafQEYRcdhPVTLGMDLTSLSKILRCGNNTDTLTLIAdntpDSIILLFed 2pola.1 VARVA lVQPH ePGATTVPARKFFDICRGLPEGAEIAVQL egERMLVRS 1plq.1_dss EEEEEgggsSEE--ss-EEEEEEHHHHHHHTT-STTTSEEEEEE-ss-SEEEEEEe- 2pola.1_ds EEEEE --S-- b-EEEEEEHHHHHHHHHHS-TT-EEEEEE etTEEEEEE Similar 11111---01111--01111111111111111111111111111--001111111-- 1plq.1 tkkdrIAEYSLKLMDI DADF 2pola.1 gRSRFSLSTLPAaDFPNldd 1plq.1_dss ssss-EEEEEEE-B-- ---- 2pola.1_ds tTEEEEEE-B-GgGS----- Similar ----011111111111-1111---
1pne aGWNAYI DNLMADGTCQDAAIVGykdSPSVWAAVPGktfvNITPAEVGILV gKD
1acf SWQTYVdTNLVGTGAVTQAAILG lDGNTWATSAG fAVTPAQGTTLAgafNN
1pne_dssp --THHHH HHHHTTSSEEEEEEEE-ssS-EEEEE-TTssggG--HHHHHHHT -S-
1acf_dssp -HHHHHhTTTGGGTS-SEEEEEE tTS-EEEE-TT ----HHHHHHHHhhhH-
Similar -111111-1111111111111111--01111111111---011111111111--011
1pne RSSFFVNGLTLGGQKCSVIRDSllqdgeFTMDLrtkstggaptFNITVTMTAKTLVL
1acf ADAIRAGGFDLAGVHYVTLRAD dRSIYGk kgsSGVITVKTSKAILV
1pne_dssp -SHHHHH-EEETTEEEEEEEE-ttsttt-EEEEee---tt----EEEEEE-SSEEEE
1acf_dssp -HHHHHH-EEETTEEEEEEEES sSEEEEe ettEEEEEEE-SSEEEE
Similar 1111111111111111111111-----0111110------00011111111111111
1pne LMGKEGVHGGMINKKCYEMASHLRRSQ
1acf GVYNEKIQPGTAANVVEKLADYLIGQG
1pne_dssp EEE-TT--HHHHHHHHHHHHHHHHHTT
1acf_dssp EEE-TTS-HHHHHHHHHHHHHHHHTTT
Similar 111111111111111111111111111
1powa.1 TNILAGAAVIKVLEAWGVDHLYGIPGGSINSIMDALSAerDRIHYIQVRHEEVGAMA 1pvda.1 SEITLGKYLFERLKQVNVNTVFGLPGDFNLSLLDKIYE vEGMRWAGNANELNAAYA 1powa.1_ds -EEEHHHHHHHHHHHTT--EEEE---GGGHHHHHHHHHttTTSEEEE-SSHHHHHHH 1pvda.1_ds -EEEHHHHHHHHHHHTT--EEEE---TTTHHHHHGGGG sTT-EE---S-HHHHHHH Similar 11111111111111111111111111111111111111-011111111111111111 1powa.1 AAADAKLTgKIGVCFGSAGPGGTHLMNGLYDAREDHVPVLALIGQFGTtgmnmdtfQ 1pvda.1 ADGYARIK GMSCIITTFGVGELSALNGIAGSYAEHVGVLHVVGVPSI shH 1powa.1_ds HHHHHHHHsS-EEEEE-TTHHHHTTHHHHHHHHHTT--EEEEEEE--Ttttts--tT 1pvda.1_ds HHHHHHHH S-EEEEEETTHHHHHHHHHHHHHHHHT--EEEEEEE--- --- Similar 11111111-111111111111111111111111111111111111111------001 1powa.1 e mNENPIYADVADYNVTAVNAATLPHVIDEAIRRAYAHQGVAVVQIPVDLP 1pvda.1 tlgngdftVFHRMSANISETTAMITDIATAPAEIDRCIRTTYVTQRPVYLGLPANLV 1powa.1_ds - ---HHHHTTTEEEEEE---SSSHHHHHHHHHHHHHHHTSEEEEEEETTGG 1pvda.1_ds s-sss-ssHHHHHHGGG-SEEEE---TTTHHHHHHHHHHHHHHHTS-EEEEEETTTT Similar 0------01111111111111111111111111111111111111111111111111 1powa.1 WQQIPAED 1pvda.1 DLNVPAKL 1powa.1_ds GSEEEGGG 1pvda.1_ds TSEEEGGG Similar 11111111
1powa.1 tNI laGAAVIKVL EAW g 1trka.1 qftdidkLAvstirilavdtvskansghpgaplgMAPAAHVLwSQMrmnptnpdwin 1powa.1_ds -EE ehHHHHHHHH HHT t 1trka.1_ds ---hhhhHHhhhhhhhhhhhhhhht-s--hhhhhHHHHHHHHhHH----tt-tt-tt Similar ------011-----------------------0011111111-111----------0 1powa.1 vDHL YGIpggsinsiMDALSAERdr ih 1trka.1 rDRFvLSNg haVALLYSMLhltgydlsiedlkqfrqlgsrtpghpefelpgv 1powa.1_ds --EE EE---ggghhhHHHHHHTTtt se 1trka.1_ds --EEeESSg ggHHHHHHHHhhtt-s--hhhhttttstt-ss-ss--ttstt- Similar 0111-1110-----001111111100-----------------------------00 1powa.1 yIQvrHEEVGAMAAAADAKL tGKIGVCFGSaGPGG tHLMN 1trka.1 eVTtgPLGQGISNAVGMAMAqanlaatynkpgftlsDNYTYVFLG DGCLqegISSE 1powa.1_ds eEE-sSHHHHHHHHHHHHHH hSS-EEEEE-tTHHH hTTHH 1trka.1_ds -S---STTHHHHHHHHHHHHhhhhhhhh-bttb------EEEEE- HHHHhshHHHH Similar 01100111111111111111---------------0111111111-1111--01111 1powa.1 GLYDAREDH VPVLALIGQfgttgm nmdtfqemNENPIYAD vADYNvTAV nAAt 1trka.1 ASSLAGHLKlGNLIAIYDDnkitidgatsisfdeDVAKRYEAygWEVL YVEngNE 1powa.1_ds HHHHHHHTT --EEEEEEE--tttt ts--tt----HHHHTT tEEEEeE-- -SSs 1trka.1_ds HHHHHHHTT-TTEEEEEEE-seetteegggt----HHHHHHHht-EEE EES-tTT Similar 111111111-111111111000000-0000000111111111-01111-111-011- 1powa.1 LPHVIDEAIRRAYAH QGVAVVQIPvdlpw q 1trka.1 DLAGIAKAIAQAKLSkDKPTLIKMT ttigygslhagshsvhgaplkaddvkqlksk 1powa.1_ds HHHHHHHHHHHHHHH TSEEEEEEEttggg s 1trka.1_ds -HHHHHHHHHHHTT-tTS-EEEEEE --ttttsttttsgggtss---hhhhhhhhhh Similar 111111111111111-111111111-0001--------------------------0 1powa.1 QIpaed 1trka.1 FGfnpdksfvvpqevydhyqktilkpgveannkwnklfseyqkkfpelgaelarrls 1powa.1_ds EEeggg 1trka.1_ds TT--tt--s---hhhhhhhhhhthhhhhhhhhhhhhhhhhhhhh-hhhhhhhhhhhh Similar 110000--------------------------------------------------- 1powa.1 1trka.1 g 1powa.1_ds 1trka.1_ds t Similar -
1ppi.1 EPFANWWDnGSNQVAFGRg nRGFIVFNN d 1cdg.1 tsttayqviqklaplrkcnpaiayGSTQERWI NNDVLIYERkfgsnVAVVAVNRnl 1ppi.1_dss --EEEEEE-SSSEEEEEEt tTEEEEEE- s 1cdg.1_dss s-shhhhhhhhhtthhhh-hhhhh-EEEEEEE -SSEEEEEEe-sseEEEEEEE--s Similar ------------------------11111111-1111111110---011111111-0 1ppi.1 DWQLSS TLQTGLPGGTYCDVIsgdkvgnsctgIKVYVSSDGT AQFSISnsaedPF 1cdg.1 NAPASIsGLVTSLPQGSYNDVLgg llngNTLSVGSGGAaSNFTLA agGT 1ppi.1_dss SS-EEE EEE--S-SEEEE-TTt--eetteess-EEEE-TTSE EEEEE-ttsss-E 1cdg.1_dss S--EEE---B-S--SEEE--TTtt tts---EEE-GGGBb--EEE- tt-E Similar 111111-11111111111111100-----00001111111111-111111---0011 1ppi.1 IAIHAESk 1cdg.1 AVWQYTA 1ppi.1_dss EEEEGGGb 1cdg.1_dss EEEEEE- Similar 1111111-
1prn EISLNGYGRFGLQYVEdrg vgledTIISSRLRINIVGTTETDqGVTF
2omf aeiynkdgnKVDLYGKAVGLHYFSKgngensyggNGDMTYARLGFKGETQINsDLTG
1prn_dssp -EEEEEEEEEEEEEETt-- tt--sEEEEEEEEEEEEEEEE-TtS-EE
2omf_dssp -eeeeetteEEEEEEEEEEEEEE-Sttsssbss--EE--EEEEEEEEEEESSsSEEE
Similar ---------1111111111111111000-0000011111111111111111101111
1prn GAKLRMQWDDG dafA gtagnaAQFWTSYN gVTVSVGNVDTAFDSvalTYDS
2omf YGQWEYNFQGNnsegadAqtgnktrlAFAGLKYAdvGSFDYGRNYGVVYD aLGYT
1prn_dssp EEEEEEEEETT -ggG ---b---EEEEEET tEEEEEES---HHHHsssTTTT
2omf_dssp EEEEEEEEESSs-ssttTttt-eeeeEEEEEEETttEEEEEEEEE-TTHH hHGGG
Similar 11111111111---0001--00010011111111-011111111111111--01111
1prn eMGyeassfgdaqssffAYnskydasgaldnyNGIAVTY siSGVNLYLSYV
2omf dmLPefggdtaysddffvGR vgGVATYRNsnffglvDGLNFAVQYL
1prn_dssp -BTtttb-tts--s-------s--ttstttt-EEEEEEE eeTTEEEEEEEE
2omf_dssp ---Sss--tt--ttsttsSE eeEEEEEEEshhhhtsTTEEEEEEEE
Similar -0110000000000000011-----------001111111-----001111111111
1prn DPdqtv dsslvTEEFGIAADWSNDMISLAAAYTTda ggivDNDIAF
2omf GKnerdtarrsnGDGVGGSISYEYEGFGIVGAYGAadrtnlqeaqplgngkKAEQWA
1prn_dssp ES-tts -gggs--EEEEEEEEE-SSEEEEEEEEEsg gg-tT--EEE
2omf_dssp --b--ssstt-b--EEEEEEEEEETTEEEEEEEEEee--hhhhtssb---sEEEEEE
Similar 110000-000001111111111111111111111100----------0000111111
1prn VGAAYkfnDAGTVGLNWYDNGls tagDQVTLYGNYAF gATTV
2omf TGLKY daNNIYLAANYGETRnatpitnkftntsgfanktQDVLLVAQYQFdfGLRP
1prn_dssp EEEEE--sSSEEEEEEEEE-Tts tt-SEEEEEEEEEE tTEEE
2omf_dssp EEEEE eeTTEEEEEEEEEEEs-seeeetttteeee-seeEEEEEEEEE--ttSEEE
Similar 11111-00111111111111100--------------00011111111111-01111
1prn RAYVSDID raGa dtAYGIGADYQFAEGVKVSGSVQSGf aN
2omf SIAYTKSKakdvegigdVdlvnYFEVGATYYFNKNMSTYVDYIINqidsdnklgvgS
1prn_dssp EEEEEEE- stT- --EEEEEEEEEEETTEEEEEEEEE-t t-
2omf_dssp EEEEEEEEeeeettteeEeeeeEEEEEEEEESSSSEEEEEEEEEE---tt-tt----
Similar 11111111-------0010-00111111111111111111111110---------01
1prn ETVADVGVRFD
2omf DDTVAVGIVYQ
1prn_dssp -EEEEEEEEEE
2omf_dssp B-EEEEEEEEE
Similar 11111111111
1pvc1 qdslpdtkasgpahskevpALTAVETGATNPLAPSdTVQTrhvvqRRSRSESTIESF
1bbt1 TTSAGESADPVTTTVE NYGGet qIQRRQHTDVSFI
1pvc1_dssp --b---b--b----ss--tTEE-GGGS------GGgTS-B--b----B-GGGBHHHH
1bbt1_dssp ----TTS---B---GG GGT--- -----GGG-HHHH
Similar -------------------1111111111111111-111100--0111111111111
1pvc1 FARGACVAIIevdneqpttraqklfAMWRITYKDt vQLRRKLEFFTYSRFDMEF
1bbt1 MDRFVKVTPQ nQINILDLMQvpshtLVGGLLRASTYYFSDLEI
1pvc1_dssp H-S-EEEEEEeeees---ss---seEEEE--S-Ss sHHHHHHTTEEEEEEEEEE
1bbt1_dssp H-S-EEE--- sSEEE--GGGs-ttsHHHHHHHTEEEEEEEEEE
Similar 1111111111--------------01111111110---0111111111111111111
1pvc1 TFVvtanftnannghalnqvYQIMYI pPGaptpkswddytwQTsSNPSIFYTygaA
1bbt1 AVK heGDLTWVpnGApe kaldNT TNPTAYHK aP
1pvc1_dssp EEEeeeee-ss-s------eEEEEEE -TTs---ssttsgggG-sSS-EEEEEttsS
1bbt1_dssp EEE eeS-EEEE-tT--g gggg-T TSSEE--- sS
Similar 111---------------00111111-01100------000011-11111111--01
1pvc1 PARISVPYVGLANAYSHFYDgfakvplktdandqigdslySAmTVd dFGVLAVrvv
1bbt1 LTRLALPYTAPHRVLATVYNg ecaTL PTsfnYGAIKA
1pvc1_dssp -EEEEE----SSSSEES---b-s---btt-sstttt---tT---Ss tT-EEEEee-
1bbt1_dssp -EEEEE----SSSSEES---s ----- -Tt-s--EEE-
Similar 111111111111111111110----------------00011-110-0111111---
1pvc1 ndhnptkvtskVRIYMKPKHVRVWCPRPPravpyygpgvdyrnnldpLSEkgltt
1bbt1 trvTELLYRMKRAETYCPRPLl aiHPTearhkqk
1pvc1_dssp s---ss-eeeeEEEEEEEEEEEEEEE-----s---ssss---s-------b-tt-
1bbt1_dssp seeEEEEEEEEEEEEEEE---- ----Ssss----
Similar --------0001111111111111111110---------------0011100000--
1pvc1
1bbt1 iva
1pvc1_dssp
1bbt1_dssp ---
Similar ---
1rcd sqv
1riba ayttfsatkndqlkepmffgqpvqvarydqqkydifekliekqlsffwrpeevdvsr
1rcd_dssp -tt
1riba_dssp ---ss--s---ttss-sbsss---s---s--s-hhhhhhhhhhhht---gggs--hh
Similar -----------------------------------------------------000-
1rcd rQNf hqDCEAGLNRTVNLKFHSSYVylsMASYFnrddvAl snfaKFF
1riba drIDyqalpehekhIFISNLKYQTLLDSIQGRS PNVALl pLisipeleTWV
1rcd_dssp --S- -hHHHHHHHHHHHHHHHHHHHhhhHHHHHtsttt-- hhhhHHH
1riba_dssp hhHHhhts-hhhhhHHHHHHHHHHHHHHHHHHH HHHHTg gGb-shhhhHHH
Similar -0110-------001111111111111111111---111110---010--0000111
1rcd RERSEEEKEHAEKLIEYQNqRGGrvf lqsvekp erDD
1riba ETWAFSETIHSRSYTHIIR NIVndpsvvfddivtneqiqkraegissyyDEliemt
1rcd_dssp HHHHHHHHHHHHHHHHHHHhHT---- ------- s-S-
1riba_dssp HHHHHHHHHHHHHHHHHHH HHSs-hhhhhhhhhh-hhhhhhttthhhhhHHhhhhh
Similar 1111111111111111111-111000-------------0000000--0011-----
1rcd waNGLEALQTALKL qKSVNQALLDLHAVAad
1riba sywhllgegthtvngktvtvslrelkkKLYLCLMSVNALeaIRFYVSFACSFAFAer
1rcd_dssp --SHHHHHHHHHHH hHHHHHHHHHHHHHHhh
1riba_dssp hhhhhh-seeeeetteeeee-hhhhhhHHHHHHHHHHHHhhTHHHHHHHHHHHHHht
Similar -------------------------00111111111111-01111111111111100
1rcd kSDPHMTDFLeSPYLSESVETIKKLGDHITSLK kLWsshpgmaEYlFNKHTl
1riba eLMEGNAKII RLIARDEALHLTGTQHMLNLLRsgaDDp emaEIaEECKQecyd
1rcd_dssp tT-HHHHHHHhTTHHHHHHHHHHHHHHHHHHHH hHHtt-hhhhHHhHHHHT-
1riba_dssp t--HHHHHHH HHHHHHHHHHHHHHHHHHHHHHhtsS-h hhhHHhHHTHHhhhh
Similar 0111111111-1111111111111111111111--0110---000110111110---
1rcd
1riba lfvqaaqqekdwadylfrdgsmiglnkdilcqyveyitnirmqavgldlpfntrsnp
1rcd_dssp
1riba_dssp hhhhhhhhhhhhhhhhttt--bttb-hhhhhhhhhhhhhhhhhhtt----s-----s
Similar ---------------------------------------------------------
1rcd
1riba ipwintwl
1rcd_dssp
1riba_dssp -gggggg-
Similar --------
1sba aetvsfswnkfvpkqpNMIL qgdAIVtssgkLQLnkvdengtPK pSS
1xyoa xtiqpgtgynnGYFYsywndghggvtYTNgpggqFSV nWSnsgNF
1sba_dssp -eeeeeeess--tt-tTEEE -tt-EE-sss-EE-s-b-tts-B- sS-
1xyoa_dssp -ee-seeeeetTEEEeeee-s---eeEEE-stteEEE eESs--EE
Similar -----000000000001111--------00011100000111-------011--011
1sba LGRALYstPIhiwdketgsvaSFAASFNFTFYApdtkrLADGLAFFLApidtkpqth
1xyoa VGGKGW qPG tkNKVINFSGSYNP nGNSYLSVYGWs
1sba_dssp EEEEEEss-B--b-ttt--b-EEEEEEEEEEE-s-tts---EEEEEEEett------
1xyoa_dssp EEEEEE sS- -sS-EEEEEEEEEE eSSEEEEEEEEe
Similar 111111-011---------00111111111111----011111111110--------
1sba agylglfnenesgdQVVAV eFDTFrnsw dppnphigInVnsi
1xyoa rnplIEYYIveNFGTynpstgatklgevtsdgsvydIyRtqrvnqps
1sba_dssp ttsttt--tt--s---EEE e---S--ss --ssseeeEeEsss
1xyoa_dssp etttEEEEEeeEESSs-ttttseeeeeeeetteeeeEeEeeeeee--
Similar ----------000011111-111110000---------00000000101000-----
1sba rsiKTtSWDlannkvaKVLITYdastsllvaslvypsqrtsnilsdvvD
1xyoa iigtatfyqywSVrRNH rsSGSVNTanhf nawaqqG
1sba_dssp s-sEEeE----tt--eEEEEEEetttteeeeeeeetttteeeeeeee--
1xyoa_dssp ttsseeeeeeeEEeSS- -sSEEEEHhhhh hhhhhtT
Similar --------000111111-----001111110000----------------0000001
1sba lktSLPEWVRIGFSAAtGLDIpGESHDvlSWsfasnlp
1xyoa l TLGTMDYQIVAVE GYFS SGSAS iTV
1sba_dssp gggTS-SSEEEEEEEE--SSS---EEEeeEEeeeeee-
1xyoa_dssp - ---EEEEEEEEEE EES- EEEEE eEE
Similar 0--1111111111111-1111-11111-011-------
1srya.1 vggeeanreikrvggppefsfppldhvalmekngwwePrisqvsgsrsyalkGDLAL 1lyla.1 dqevrYrqryld liandksRQTFV 1srya.1_ds -ssggg-eeeeees-----ss----hhhhhhhht-b-Tthhhhh-ss---eeHHHHH 1lyla.1_ds -hhhhHh-hhhh hhh-hhhHHHHH Similar --------------------------------000001000000-000000011111 1srya.1 YELALLRFAMDFMARRGFLPMTLPSYARekaflgtghfpayrDQVWAIA eTDL 1lyla.1 VRSKILAAIRQFMVARGFMEVETPMMQVip ggasARPFITHhnaldLDM 1srya.1_ds HHHHHHHHHHHHHHHTT-EEEE--SEEEhhhhhhht-ttttgGG--BBT tSSE 1lyla.1_ds HHHHHHHHHHHHHHHTT-EE----SEESs- -ss-S---EEE-sss--EE Similar 111111111111111111111111111100--------00001111111----0111 1srya.1 YLTGTAEVVLNAlhsgeilpyealplRYAGYAPAFRseagsfgkdvrglMRVHQFHK 1lyla.1 YLRIAPELYLKRlvv ggfeRVFEINRNFRneg isvRHNPEFTM 1srya.1_ds EE-SSTHHHHHHtttt-eeeggg-seEEEEEEEEE-------ss---ssSS-SEEEE 1lyla.1_ds EE-S-SHHHHHHhhh tt--EEEEEEEEE---- -btTB-SEEEE Similar 111111111111000-------00001111111111000-------00011111111 1srya.1 VEQYVLteasleasdrAFQELLENAEEILRLl 1lyla.1 MELYMA yaDYHDLIELTESLFRTlaqevlgttkvtygehvfdfgkpfek 1srya.1_ds EEEEEEe-s-hhhhhhHHHHHHHHHHHHHHHt 1lyla.1_ds EEEEEE s--HHHHHHHHHHHHHHhhhhhhs-seeeetteeeetts--ee Similar 111111--------001111111111111110------------------------- 1srya.1 1lyla.1 ltmreaikkyrpetdmadldnfdaakalaesigitvekswglgrivteifdevaeah 1srya.1_ds 1lyla.1_ds eehhhhhhhhstt--gggggshhhhhhhhhhht----tt--hhhhhhhhhhhhtggg Similar --------------------------------------------------------- 1srya.1 elpYRLV EVATGdmGPGK wRQVDIEVylpsegrYRETHSCSALLDw 1lyla.1 liqPTFItEYPAE vSPLArrndvnpeitDRFEFFI gGREIGNGFSELNda 1srya.1_ds t--EEEE E--TTts-TT- sEEEEEEEeetttteEEEEEEEEEEETt 1lyla.1_ds --s-EEEeEEEGG g-TTB-b-ss-tteeEEEEEEE tTEEEEEEEEB---h Similar 0001111-11111-01111---------01111111------01111111111110- 1srya.1 qarrAnlryrdpegrvryAYTLNNtaLATPRIL 1lyla.1 edqaerfqeqvnakaagddeamfydedyVtal eyglPPTAGL gIGIDRMI 1srya.1_ds thhhHt-eee-tts-eee-EEEEEeeEEETHHH 1lyla.1_ds hhhhhhhhhhhhhhhtt-tts----hhhHhhh hh---SEEEE eEEHHHHH Similar ------------------------00001000------0000111111-01111111 1srya.1 AMLLENHqlqdGRVRvPQAlipymgkevlepc 1lyla.1 MLFTNSHtirdVILFpAMR 1srya.1_ds HHHHHHHb-ttS-EE--GGghhhhsssee--- 1lyla.1_ds HHHHT--sgggSSSS---- Similar 1111111000011110111-------------
1tde.1 gtTKHSKLLILGSGPAGYTAAVYA ARANLQPVLITGm eKGGQ LTTt 2tpra.1 SRAYDLVVIGAGSGGLEAGWNAaSLHKKRVAVIDLqkhhgpphyaaLGGTcVNVg 1tde.1_dss --EEEEEEEEE--SHHHHHHHHHH HTTT---EEE--s sTT-G GGG- 2tpra.1_ds -EEEEEEEE--SHHHHHHHHHHhTTT---EEEEES-sssbtttb--TT-HhHHHs Similar --1111111111111111111111-1111111111110---------01111-1110 1tde.1 tevenw pgdpndltgplLmERMHEH 2tpra.1 cvpkklmvtganymdtiresagfgweldresvrpnwkaliaaknkavsgInDSYEGM 1tde.1_dss sb---s tt--ss-bhhhHhHHHHHH 2tpra.1_ds hhhhhhhhhhhhhhhhhhhggggtee--ggg-ee-hhhhhhhhhhhhhhHhHHHHHH Similar 000000--------------------------------0000000000010111111 1tde.1 ATKF ETEIIFDHInKVDLqnrpFRLNG dNGEYTCDALIIATGASAr 2tpra.1 FADTeGLTFHQGFG ALQD nHTVLVresadpnsavLETLDTEYILLATGSWPqh 1tde.1_dss HHHT T-EEE---EeEEE-ssssEEEEE sS-EEEEEEEEE---EEE- 2tpra.1_ds HHT-tTEEEEESEE EEEE tTEEEEesssstts-eEEEEEEEEEEE---EEE-- Similar 1111-111111111-1111---011111---------0111111111111111110- 1tde.1 yhSPNT AIFE gQLELE NGYIKVQsgihgnaTQTSIPGVFAAGDVMDhIYRQ 2tpra.1 lgirVPRSqTLQLekaGVEVAkNGAIKVD aySKTNVDNIYAIGDVTD RVML 1tde.1_dss -eEES- GGGT tTS-EE TTEE----ssss-tTB-SSTTEEE-GGGS-sS--- 2tpra.1_ds --seEE--gGG-GgggT--B-tTS-B--- ttSB-TTSSEEE-GGGG- S--S Similar --001111-1111--011111-1111111-----001111111111111111-1111 1tde.1 AITSAGTGCMAALDAEryldg 2tpra.1 TPVAINEGAAFVDTVFankprat 1tde.1_dss HHHHHHHHHHHHHHHHhhht- 2tpra.1_ds HHHHHHHHHHHHHHHHt------ Similar 111111111111111100000--
256ba adLEDNMETLNDNLKVIEK aDNAAQVKDALTKMRAAAL DAQKA
1bbha aglspeeqietRQAGYEFMGWNMGKIKAnlegeYNAAQVEAAANVIAAIANsGMGAL
256ba_dssp --HHHHHHHHHHHHHHHHH --SHHHHHHHHHHHHHHHH HHTTS
1bbha_dssp ----hhhhhhhHHHHHHHHHHHHHHHHHhhhs---HHHHHHHHHHHHHHHTs-GGGG
Similar ---------0011111111111111111----0111111111111111111-11111
256ba tppkle dkspdspEMKDFRHGFDILVGQIDDALKLANEGKVKEAQAAA
1bbha ygpgtdknvgdvktrvkpeffqNMEDVGKIAREFVGAANTLAEVAATGEAEAVKTAF
256ba_dssp --gggt ts-ttshHHHHHHHHHHHHHHHHHHHHHHHHTT-HHHHHHHH
1bbha_dssp s-ggggs-bttb---b-gggtt-HHHHHHHHHHHHHHHHHHHHHHTTT-HHHHHHHH
Similar 000000---------000000011111111111111111111111111111111111
256ba EQLKTTRNAYHQKY
1bbha GDVGAACKSCHEKYra
256ba_dssp THHHHHHHHHHHHH
1bbha_dssp HHHHHHHHHHHHHHb-
Similar 11111111111111--
2afga KPKLLYCsNGGHFLRILpDGTVDGTR dRSdQhIQLQLSAE svgEVY
8i1b qLHYRLRD EQQKSLVLSdPYELKALHlngqnIN QqVIFSMSFVqgepsndkiPVA
2afga_dssp --EEEEEtTTTEEEEE-tTS-EEEE- -TT-GgGEEEEEES sttEEE
8i1b_dssp -EEEEEEE TT--EEEEEtTTEEEEE---gggGT Tb--EEEEE-s----sseeEEE
Similar -1111111-111111111011111111----011-1011111111------000111
2afga IKSTETGQYLAMD tDGLLYGSQ tpNEECLFLERLeENHYNTYISK
8i1b LGLKGKNLYLSCVmkdgTPTLQLESvdpkqypkkkmEKRFVFNKIE VKSKVEFESA
2afga_dssp EEETTT--EEEE- tTS-EEEES s--GGGEEEEEE-TTS-EEEEES
8i1b_dssp EEETTSSEEEEEEeettEEEEEEEE--ttt-s-ss--GGGEEEEEE ETTEEEEEES
Similar 1111111111111---011111111---------001111111111-1111111111
2afga KHaeKNWFVGLKKN gSCKRGprthygqkAILFLPLPv
8i1b EF PNWYISTSQAehkPVFLGnns gqdIIDFTMES
2afga_dssp TTggGT-B--B-SS s-B--Ttt--tt-gGG-EEEEE-
8i1b_dssp SS TT-EEEB-SSsseE-EEE--- tt-B--EEEEE
Similar 11--1111111111--011111000--00011111111-
2alp anivGGIEYSinnas lCSVGFSVtrgatkGFVTAGHCgtvnaTARiggAvvg tfA
2snv RLFDVKnedgdviGHALAME gKVMKPLHV kgTID hPvlsklkF
2alp_dssp -eeeET-EEEettte eEE--EEEeetteeEEEE-GGG--tt-EEEettEeee eeE
2snv_dssp -EEEEEettteeeEEEEEET tEEEEETT- -sEES sTtgggs--
Similar ----11111100000-01111111-----011111111---00111--01000-001
2alp ARVfPGNDRAWVSLTsaqtllprvangssfvtvrGSTEAAvGAAVCRsgrttgyQCG
2snv TKS SAYDMEFAQLPvnmr seafTYTSEHpEGFYNW hhGAV
2alp_dssp EEE-SBS-EEEEEE-tt-eeeeeeeetteeee--B-----tT-EEEEeettteeEEE
2snv_dssp EEE GGGTEEEEE--tttt ts-b-B-----SSEEEE ttEEE
Similar 111-111111111110000-----------00001111110111111-----01111
2alp TITAknvtanyaegavrgltQGNA cMGRGDSGGSWITSAGQAQGVMSGGNvqsn
2snv QYSG gRFTIprgvGGRGDSGRPIMDNSGRVVAIVLGGAd
2alp_dssp EEEEeeeeeeetteeeeeeeEE-- --BTT-TT-EEE-TTSBEEEEEEEE---tt
2snv_dssp EEET tEEEEetts--TT-TT-EEE-SSS-EEEEEEEEEe
Similar 1111---------------01111---011111111111111111111111110---
2alp gnncgipasQRSSLFER lqPILSQYGLSLVt
2snv egtRTALSVVTwnskgkTIKTTPEGTEE
2alp_dssp sbstts-ggG--EEEEE hhHHHHHHT-EE--
2snv_dssp ettEEEEEEEEe-sss--EEEE-SS-EE
Similar ------00011111111----0011111111111-
2ayh qtggsffepfnsynsgTWEKAdgySNggvfnctwranNVNftndgkLKLGLTssayn
1xnd qtigpgtgys nGYYYS ywNDgha gvtyTNG gggSFTVNWsn s
2ayh_dssp --s--eee--ss--ssSEEE--s----ttb-see-ggGEEe-tts-EEEEEEeeett
1xnd_dssp --b-seeees sS-EEE eeE-s-s -eeeEE- sttEEEEEEss -
Similar ---0000000000--011111-0011000----0000111---00011111100--0
2ayh kfdcAEYRStNIYGyGLYEVSmk pakNTGIVSSFFTYTgpahgtQWDEIDI eFL
1xnd gnfvAGKGW QPGT KNKVINfsgsynpNGNSYLSIYGWS rnPLIEYYIveNF
2ayh_dssp eeeeEEEEEsS-B-sEEEEEEee ----TTEEEEEEEEE-gggts--EEEEE eEE
1xnd_dssp -eeeEEEEE SS-- TT-EEEeeeeeeeESSEEEEEEEEE etTTEEEEEeeEE
Similar 000011111-1111-11111100--000111111111111----001111111-011
2ayh gk dttkvqfNyy tngVggHEKVIslgFDAsk
1xnd gtynpstgatklgevtsdgsvydiYrtqrvnqpsiigtatfY qYWSVR rNHR
2ayh_dssp tt -tteeeeEee bttB----EEEe-sS-Ggg
1xnd_dssp -ss-tttt-eeeeeeeetteeeeeEeeeeeee--ttsseeeE eEEEEE sS--
Similar 00---------------0000000100-----------0001-011111--0111--
2ayh gFHTYAfdwqpgyikwyvdgvlkhtA TANIPSTPGKIMMNLWNgtgvddwlgsyn
1xnd sSGSVNta nhfnaWasHGLTLGTMDYQIVAVEG yf
2ayh_dssp s-EEEEeeeetteeeeeetteeeeeE -SS---S-BEEEEEEEEbss-hhhh----
1xnd_dssp sSEEEEhh hhhhhHhhTT----EEEEEEEEEEE es
Similar 01111100------------000001--11111111111111111----------00
2ayh GANplyAEYDWvkyts
1xnd SSG sASITV
2ayh_dssp ----eeEEEEEeeeee
1xnd_dssp -EE eEEEEE
Similar 111--011111-----
2dkb lnddatfwrnarhhl vRYggtfepmiierakgsfvydadgraildftsgq msav
7aata sswwshvemgpPDpilgvte afkrdtnskkmnlgvgayrddng
2dkb_dssp ----hhhhhhhhhh- ---ss---ss-eeeeebteeeett--eeeetthhh ht-t
7aata_dssp --sstt-------hhhhhhh hhhh---tt-ee----s---tts
Similar ------000000000-0110000000--------00000000000000000--0000
2dkb lgHCHpeIvsvigey agkLdhlFsemlsrpvVDLATRLANITp pgld
7aata kpYVLncVrkaeamiaakkmD keYlpia glADFTRASAELAlgenseafksgry
2dkb_dssp t-BT-hhHhhhhhhh hhh-----tt---hhhHHHHHHHHHHS- tt--
7aata_dssp -----hhHhhhhhhhhhtt-- -----tt --HHHHHHHHHHHh-tt-hhhhtt-e
Similar 001110110000000--0001-0010000--00111111111110--------0000
2dkb RALLLSTGAESNEAAIRMAKLVTG KYEIVGFAQ sWHGmTgaaasatysagrkgvg
7aata VTVQGISGTGSLRVGANFLQRFFKfSRDVYLPKPswGNHtPifr
2dkb_dssp EEEEES-HHHHHHHHHHHHHHHHS --EEEEETT ----sShhhhht--ss--sss-
7aata_dssp EEEEEEHHHHHHHHHHHHHHHH-Tt--EEEEEES--TTHhHhhh
Similar 111111111111111111111111-111111111-011101000-------------
2dkb paavGSFAIPaPFTyrprferngaydyLAELDYAFDLidrqssgnLAAFIAE PILS
7aata daglQLQAYR YYDpkt csldFTGAMEDISKi peKSIILLHaCAHN
2dkb_dssp ---tTEEEE----Tts---eettee-hHHHHHHHHHHhhhh--s-EEEEEE- SEET
7aata_dssp htt-EEEEEE -EEttt tee-HHHHHHHHTTs -tT-EEEEEsSS-T
Similar 0000111111-111000------000011111111110-----001111111-1111
2dkb sGGIIELPDGYMAALKRKCEARGMLLILDEaqtgVGR TGTMfacqr dgvt
7aata PTGVDPRQEQWKELASVVKKRNLLAYFDMa yQGFaSGDInrdawalrhfieqgi
2dkb_dssp tTTSEE--TTHHHHHHHHHHHTT-EEEEE-ttttTTT TSSSshhhh ht--
7aata_dssp TT-----HHHHHHHHHHHHHTT-EEEEEEs -TTTtTS-Hhhhthhhhhhhhtt-
Similar -111111111111111111111111111110--0111-111100000------0000
2dkb pDILTLs ktlGAGLPLAAIVTSA aiEErAhel gylfYTthVSDPLPAAV
7aata dVVLSQsyaknmgLYGERAGAFTVICrdaeeAKrVesqlkilirPMysNPPMNGARI
2dkb_dssp -SEEEE- hhhHTTSS-EEEEE-H hhHHhHhhh t-----ttTT-HHHHHH
7aata_dssp --EEEEe-ttts--GGG-EEEEEEE-sshhhHHhHhhhhhhhhhHHhsS--HHHHHH
Similar 0111110---0001111111111111---001101000--00001100111111111
2dkb GLrvldv vqrdGLVARANVMGDRLRRGLLDLM eRFdci gdVRGRGLLLG
7aata ASlilntpelrkewlVEVKGMADRIISMRTQLVSNLkkeGSshnwqhiTDQIGMFCF
2dkb_dssp HHhhhhh hhhtTHHHHHHHHHHHHHHHHHHHH hH-tte eeEEEETTEEE
7aata_dssp HHhhhh-hhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhtT--s--hhhHH--SSEEE
Similar 1100000----0000111111111111111111111--011000--00111111111
2dkb VEivkdrrtkepADGLGAKITrecmnlglsmnIVQlpgmgGVFRIappltvsedeiD
7aata TG lKPEQVERLTkef siyMTK dGRISVa gvaS
2dkb_dssp EEebs-tttt-b-SSHHHHHHhhhhhhtee--EE--tts--EEEE---tt--hhhhH
7aata_dssp -- --HHHHHHHHhhh -ee--T t-EEEGg g--T
Similar 11---------0111111111000-----000111----0111110-------0001
2dkb LGLSLLGQAIera
7aata SNVGYLAHAIhqvt
2dkb_dssp HHHHHHHHHHhhh
7aata_dssp TTHHHHHHHHhhhh
Similar 1111111111000-
2fxb pkYTIVdkET cIACGACGAA ApDIYDYDEdGIAYVTlddnqgivEvpdiliddm
5fd1 AFVV tDNcikCKYTDCVEVcPvDCFYEGP NFLVIH pDeci dc
2fxb_dssp ---EEE-sTT ------HHHH -tTTEEEETtTEEEETtttsss-s---ggghhhh
5fd1_dssp -EEE -GGgttT---THHHH-Tt--EEE-S S-EEE- tTt-- --
Similar --1111-011--0111111111-101111111-111111-------01000----01
2fxb MDAFEGCPTDSIKVAdepfdgdpnKF
5fd1 ALCEPECPAQAIFSEd evPEdmqefiqlnaelaevwpnitekkdplpdaed
2fxb_dssp HHHHHT-TT--EEE-ss---s-ttS-
5fd1_dssp --HHHH-TT--EEEGg g--Gggthhhhhhhhhhhhs-b--s-----tthhh
Similar 1111111111111111------0011-------------------------------
2fxb
5fd1 wdgvkgklqhle
2fxb_dssp
5fd1_dssp htt-s-gggg--
Similar ------------
2gbp aDTRIGVTIYKYDDNFMSVVRKAIEQDAKAApDVQLLMNDSQNDQSKQNDQIDVLLA
1pnra.1 TKSIGLLATSSEAAYFAEIIEAVEKNCFQK GYTLILGNAWNNLEKQRAYLSMMAQ
2gbp_dssp --EEEEEEES-TT-HHHHHHHHHHHHHHTT-tTEEEEEEE-TT-HHHHHHHHHHHHH
1pnra.1_ds -SEEEEEES-SSSHHHHHHHHHHHHHHHHT T-EEEEEE-TT-HHHHHHHHHHHHH
Similar -111111111111111111111111111111-1111111111111111111111111
2gbp KGVKALAINLVDP aAAGTVIekargqNVPVVFFNKEpsrkaldsydkAYYVGTDS
1pnra.1 KRVDGLLVMCSEYpepLLAMLEe yrHIPMVVMDWGeak adfTDAVIDNA
2gbp_dssp TT-SEEEE--SSG gGHHHHHhhhhttT--EEEESS---hhhhht-ttEEEEE--H
1pnra.1_ds TT-SEEEE--S---hhHHHHHGg gtTS-EEEEEESs-- -ssSEEEE---
Similar 1111111111111--01111110---001111111111000-----00011111111
2gbp KESGIIQGDLIAKHwaanqgwdlnkdgqiQFVLLKGEPGHPDAEARTTYVIKELNDK
1pnra.1 FEGGYMAGRYLIERg hrEIGVIPGPLERNTGAGRLAGFMKAMEEA
2gbp_dssp HHHHHHHHHHHHHHhhh-ggg-tt-ssseEEEEEE-STT-HHHHHHHHHHHHHHHHT
1pnra.1_ds HHHHHHHHHHHHHTt --SEEEE---TTSHHHHHHHHHHHHHHHHT
Similar 111111111111110------------001111111111111111111111111111
2gbp GIKTEQLQLDTAMWDTAQAKDKMDAWLSGpnankIEVVIANNDAMAMGAVEALKAHN
1pnra.1 MIKVPESWIVQGDFEPESGYRAMQQILSQp hrPTAVFCGGDIMAMGALCAADEMG
2gbp_dssp T--EEEEEEEE-TT-HHHHHHHHHHHTTSttttt--EEEESSHHHHHHHHHHHHHTT
1pnra.1_ds T----GGGB----SSHHHHHHHHHHHHSSs s--SEEEESSHHHHHHHHHHHHHTT
Similar 111111111111111111111111111110--0011111111111111111111111
2gbp K ssIPVFGVDALPEALAlvkSGaLaGTVLNDANNQAKATFDLAKNLADGKgaad
1pnra.1 LrvpqdVSLIGYDNVRNARY fTPaL TTIHQPKDSLGETAFNMLLDRIVNKr
2gbp_dssp - ttS-EE-SB--HHHHHhhhHTsSsBEEE--HHHHHHHHHHHHHHHHTTS-ttt
1pnra.1_ds --tttt-EEEEEE--TTGGG sSS-- EEEE---HHHHHHHHHHHHHHHHT--
Similar 1---0111111111111111--01101-11111111111111111111111110---
2gbp gtnwkidnKVVRVPYVGVDKDNlaEFsk
1pnra.1 eepQSIEVHPRLIERRSvaDGpfrdy
2gbp_dssp ts----btTEEE---EEE-TTTggGTs-
1pnra.1_ds -s--EEE---EEE--SS----tttt-
Similar -----00011111111111111001100---
2hhma WQECMDYAVTLARQA gVVEaik
1spia aatqtkartrskyeietltgwllkqpmagvidaeLTIVLSSISLACKQIasLVQr
2hhma_dssp -HHHHHHHHHHHHHH ----ggg
1spia_dssp -----ttss---tt--bhhhhhhhs-ss-sstthHHHHHHHHHHHHHHHhhHHH-
Similar ----------------------------------111111111111111-01110--
2hhma nemnvmlksspvdlvtaTDQKVEKLIssikEKYp shSFIGEEsvaAGEksi l
1spia akLDVVSNEVFssclRSSgrtgIIASEE EDVpvaveesy
2hhma_dssp s---eeessstt-eeehHHHHHH--HhhhhHH-t t-EEEEHHhhhTT---- -
1spia_dssp --GGGTSHHHHhhhhTT-ttssSEE-SS -SS---s-ss-
Similar ---------------0011111111100001110-00111111---111000----0
2hhma tdnPTWIIDPIDGTTNFVHrFPFVAVSIGFAVn
1spia sgnYIVVFDPLDGSSNIDA AVSTGSIFGIYSpndecivdsdhddesqlsaeeqrcv
2hhma_dssp -ss-EEEEEEEETHHHHHHt-S--EEEEEEEEt
1spia_dssp --s-EEEEE-SS-HHHHTT -S----EEEEE--tt----s----s----ss------
Similar 0001111111111111111-1111111111110------------------------
2hhma kKIEFGVVYs vEGKMYTARKgKGAFCn gqKLQVSqq
1spia vnvcqpgdNLLAAGYCmyssSVIFVLTIG KGVYAftldpmygefvltseKIQIPk
2hhma_dssp tEEEEEEEE- ----EEEEETtS-EEEt teE------
1spia_dssp ------ssSEEEEEEEeessSEEEEEEET TEEEEeeeetttteeeeeeeS----s
Similar -------0111111110--0111111111-111110------------00111110-
2hhma editkSLLtelgssrtpetvRvl sNMEKLFCi pvHGIRSVGTAAVNM
1spia agKIYsf negnYkmwpdklkkYMDDLKEpgesqkpYSSRYIGSLVGDF
2hhma_dssp --ggg-B-----s---hhhh--h hHHHHHHTt t-SB--B-S-HHHHH
1spia_dssp ---EEe- -ggg-tts-hhhhhHHHHHTS-ssss---EE-B-S-HHHHH
Similar ---0011100------0000100------011111110----001111111111111
2hhma CLVAtGGADAYYE mGI HCWDVAGAGIIVTEAGGVLMDvTGGPf
1spia HRTL LYGGIYGYprdakskngKLrLLYECAPMSFIVEQAGGKGSD GHQRildiqp
2hhma_dssp HHHHhTSSSEEEE eS- -HHHHHHHHHHHHHTT-EEE-tTSS--
1spia_dssp HHHH HH--EEEE-ssssbttbSSbTTTTHHHHHHHHHHHS-EEBS SSSBssss--
Similar 1111-11111111--------011-111111111111111111111-11110-----
2hhma dlms RRVIAAnNRILAERIAKEiqviplqrdd
1spia teihqrVPLYIG SVEEVEKLEKYl
2hhma_dssp -tts SEEEEEsSHHHHHHHHHH--------tt
1spia_dssp ssss-b--EEEE -SHHHHHHHTT-
Similar -0000-111111-111111111110---------
2hnq kefeqidksgswaaIYQDIRHE asd fpCRVAKLpknkNRNRYRDVSPFDHS
1yts pearaeLSSRLTTLrntlapatndpRYLQACgg eKLNRFRDIQCRRQT
2hnq_dssp -hhhhhhhhtthhhHHHHHHHH s-- ---HHHHSggggGG-S-SS----TTT
1yts_dssp -hhhhhHHHHHHHHhhht---tt-tTB----tt s---SSTTS--BGGG
Similar --------00000011111111--000----0011111100-011111111111111
2hnq RIklhqedndYINASLIKMeeaQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNR
1yts AV raDLNANYIQV gNTRTIACQYPLQSQLESHFRMLAENRTPVLAVLAS
2hnq_dssp B---s-ss----SEEEEEEtttTEEEEEE----TTTHHHHHHHHHHTT--EEEE-S-
1yts_dssp BS -tTS-EEEEEE tTEEEEEE----GGGHHHHHHHHHHTT-S-EEE-S-
Similar 11------00111111111--011111111111111111111111111111111111
2hnq Vmek gslkCAQYWPqkeekEMIFedtNLKLTLISEDIK sYYTVRQLELEN
1yts SseianqrfgMPDYFR qSGTY gSITVESKMTQQVglgdgiMADMYTLTIRE
2hnq_dssp Seet tee-S---S-sstts-EEEtttTEEEEEEEEEE- sSEEEEEEEEEE
1yts_dssp Hhhhh-ggg-----SS s-EEE tTEEEEEEEEEEEeeetteEEEEEEEEEEE
Similar 1000--0000111111----01111--0111111111111-----011111111111
2hnq LTtqETREILHFHYTTWPDFGVpeSPASFLNFLFKVRESgsl s
1yts AG qKTISVPVVHVGNWPDQTA vSSEVTKALASLVDQTaetkrnmyeskgssavad
2hnq_dssp TTttEEEEEEEEEE----SSS--s-HHHHHHHHHHHHHTttt s
1yts_dssp TT s--EEEEEEEETT--TT-- --HHHHHHHHHHHHHHhhhhhhhhhttt-sttt-
Similar 11-0111111111111111111-0111111111111111000--------------0
2hnq pehGPVVVHCSAGIGRSGTFCLADTCLllmDKrkdpssVDIKKVLLEMRKFR MGLI
1yts dskLRPVIHSRAGVGRTAQLIGAMCMN dSRn sqLSVEDMVSQMRVQRnGIMV
2hnq_dssp tts--EEEESSSSSHHHHHHHHHHHHHhhhHHh--ggg--HHHHHHHHHTTS TTSS
1yts_dssp ttsS--EEE-SSSSSHHHHHHHHHHTT -TTs tt--HHHHHHHHHHHS-TTSS
Similar 000111111111111111111111111--0110---0011111111111111-1111
2hnq QTADQLRFSYLAVIEgakfi
1yts QKDEQLDVLIKLAEGqgrplln
2hnq_dssp -SHHHHHHHHHHHHHhhtt-
1yts_dssp -SHHHHHHHHHHHHHht--ss-
Similar 11111111111111100000--
2hpda tikemPQPktfgelknlplLNtDk pvqaLMKIADEL gEIFKFe apgRVTRY
1cpt mdaraTIPehi artvILpQgyaddevIYPAFKWLrdeqPLAMAhiegyDPMWI
2hpda_dssp -----------ttsttgggG-sS- hhhhHHHHHHHH -SEEEEe ettEEEEE
1cpt_dssp --tt--S-hhh hhhhHSsGggg-hhhHHHHHHHHhhh-SEEEE--tts--EEE
Similar 00000111000----000011010--000011111111---0111110-00011111
2hpda LSSQRLIKEA cDESRFDK nLSQalkf vrdfaGDGLFTSWThek
1cpt ATKHADVMQIgkQPGLFSNaegSEIlydqnneafmrsisggcphvIDSLTSMDP p
2hpda_dssp E-SHHHHHHH t-TTTEEE ---Hhhhh hhhhhTTSGGGS-Ttsh
1cpt_dssp E-SHHHHHHHhh-TTTEESsss-SS---hhhhhhhhhhtttss-sS--GGG--T t
Similar 1111111111-01111111--01110000-----------00000111111111--0
2hpda NWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNadeHIEVP eDMTRLTL
1cpt THTAYRGLTLNWFQPASIRKLEENIRRIAQASVQRLLDFD gECDFMtdCALYYPL
2hpda_dssp HHHHHHHHHGGGGSTTTHHHHHHHHHHHHHHHHHHHHT--tt--EEHH hHHHHHHH
1cpt_dssp HHHHHHHHHHTTSSHHHHGGGHHHHHHHHHHHHHHHHTSS sEEEHHhhTTTTHHH
Similar 1111111111111111111111111111111111111111--011111-01111111
2hpda DTIGLCGFNYrfnsfyrdqphPFITSMVRALdeamnklqranpddpaydeNKRQFQE
1cpt HVVMTALGVPe ddepLMLKLTQDFFg veAARRFHE
2hpda_dssp HHHHHHHHS----ggg-ss--HHHHHHHHHHhhhhhhhh-ss-sssthhhHHHHHHH
1cpt_dssp HHHHHHHT--g gghhHHHHHHHTTT- --HHHHHHH
Similar 11111111110------000011111111110----------------001111111
2hpda DIKVMNDLVDKIIADRKasgEQSDDLLTHMLNGKdpeTGEPLDDENIRYQIITFLIA
1cpt TIATFYDYFNGFTVDRR sCPKDDVMSLLANSK lDGNYIDDKYINAYYVAIATA
2hpda_dssp HHHHHHHHHHHHHHHHHhh----SSHHHHHHT-B-ttT--B--HHHHHHHHHHHHHH
1cpt_dssp HHHHHHHHHHHHHHHHT tS--SSHHHHHHH-B sSSSB--HHHHHHHHHHHHHH
Similar 11111111111111111--011111111111111--011111111111111111111
2hpda GHETTSGLLSFALYFLVKNPHVLQKAAEeaarvlvdpvpsykqvkqlKYVGMVLNEA
1cpt GHDTTSSSSGGAIIGLSRNPEQLALAKS dpALIPRLVDEA
2hpda_dssp HHHHHHHHHHHHHHHHHH-HHHHHHHHHhhhhh--sss--hhhhht-HHHHHHHHHH
1cpt_dssp HHHHHHHHHHHHHHHHHH-HHHHHHHHH -gGGHHHHHHHH
Similar 1111111111111111111111111111-----------------001111111111
2hpda LRLWPTAPAFSLYAKEDTVLGgEYPLEKGDELMVLIPQLHRDKTIWgDDVEEFRPER
1cpt VRWTAPVKSFMRTALADTEVR GQNIKRGDRIMLSYPSANRDEEVF SNPDEFDITR
2hpda_dssp HHH--SS-EEEEEESS-EEETtTEEE-TT-EEEEEHHHHTT-HHHH-S-TTS--GGG
1cpt_dssp HHHH--B---EEEESS-EEET TEEE-TT-EEEE-HHHHTT-TTT- SSTTS--TT-
Similar 111111111111111111111-111111111111111111111111-1111111111
2hpda fenpsaipqhaFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFedhtNYELDIKE
1cpt f pnrHLGFGWGAHMCLGQHLAKLEMKIFFEELLPKLKSv elSGPPRLVA
2hpda_dssp gssgggs-tts--TT-SGGGS-TTHHHHHHHHHHHHHHHHHHEEEe-tt-----EEE
1cpt_dssp - s----TT--STT--TTHHHHHHHHHHHHHHHGGGEEEe eeSS--EE--
Similar 0-------00011111111111111111111111111111111110-0011111111
2hpda tLTLKPEGFVVKAKSkkiplg
1cpt tnFVGGPKNVPIRFTK
2hpda_dssp sSSEEETT-EEEEEE------
1cpt_dssp -sSB-SEEE-EEEEEE
Similar -011111111111111------
2liga mggllfsslqhcqqgfvISNELRQQQSELTSTWDLMLQTRINLsrsaarmmmdasnq
1cgn xfakPEDAVKYRQSALTLMASHFGRMAPVVkgq
2liga_dssp ---ssssshhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhts--stt
1cgn_dssp --ssHHHHHHHHHHHHHHHHHHHHTTHHHHtts
Similar -------------000011111111111111111111111111000-----------
2liga qssaktdlLQNAKTTLAQAAAHYANFKNmtPLpam aeasANVDEK
1cgn apydAAQIKANVEVLKTLTALPWA aFGagteggdarpeiwsdaagfKQKQQA
2liga_dssp -s--s-thHHHHHHHHHHHHHHHHHHHHs---ggg hhhhHHHHHH
1cgn_dssp s---HHHHHHHHHHHHHHTTSGGG g--tt---ttb-thhhhthhhhHHHHHH
Similar ----000011111111111111111111-011000------------0000111111
2liga YQRYQAALAELIQFldngNMDAYFAqpTQGMQNALGEALGNYArvsenlyrqtf
1cgn FQDNIVKLSAAADA gDLDKLRA aFGDVGASCKACHDSYR
2liga_dssp HHHHHHHHHHHHHHhhtt-HHHHHHs-HHHHHHHHHHHHHHHHhhhhhhhhtt-
1cgn_dssp HHHHHHHHHHHHHH t-HHHHHH hHHHHHHHHHHHHHHHB
Similar 11111111111111---01111111-01111111111111111-----------
2liv edIKVAVVGAMSGpVAQYGDQEFTGAEQAVADINAKGGIkGNKLQIAKYDDACDPKQ
1pea PLIGLLFSETGvTADIERSQRYGALLAVEQLNREGGVgGRPIETLSQDPGGDPDR
2liv_dssp --EEEEEEE-SSSsSHHHHHHHHHHHHHHHHHHHHTTTBtTB-EEEEEEE-TT-HHH
1pea_dssp -EEEEE--SSStTHHHHHHHHHHHHHHHHHHHTTTTBtTB--EEEEE--TT-HHH
Similar --1111111111101111111111111111111111111011111111111111111
2liv AVAVANKV VNDGIKYVIGHLCSSSTQPASDIYEDEGILMITPaATapeltArGYQL
1pea YRLCAEDFiRNRGVRFLVGCYMSHTRKAVMPVVERADALLCYP TPy egFeYSPN
2liv_dssp HHHHHHHH HHTT--EEEE--SHHHHHHHHHHHHHTT-EEEESs---gggsSs--SS
1pea_dssp HHHHHHHHhHTT---EEEE--SHHHHHHHHHHHHHTT-EEEE- S-- ------TT
Similar 11111111-1111111111111111111111111111111111-110--00101111
2liv ILRTTGldsdQGPTAAKyilekvkpqrIAIVHd kqqYGeGLARAVQdglkk
1pea IVYGGPapnqNSAPLAAyli rhygERVVFigsdyiypreSNhVMRHLYRq
2liv_dssp EEE-S--gggHHHHHHHhhhhtt--ssEEEEE- sshHHhHHHHHHHhhhht
1pea_dssp EEE-S--gggTHHHHHHhhh ttt-SEEEEeeesshhhhhHHhHHHHHHHh
Similar 11111100011111111000---0000111110------00011011111110----
2liv gnanvvFFDGitagekdfstlvarlkkenidfvyyggyhpEMGQilrqaraaglktq
1pea hggTVLEeiyiplyp sdddlqraveRIYQa ra
2liv_dssp tt--eeEEEE--tt----hhhhhhhhhtt-seeeees-hhHHHHhhhhhhhtt---e
1pea_dssp tt-EEEEeeee-ss- -hhhhhhhhhHHHHh t-
Similar ---000111100000000------------000000000011110----------00
2liv fMGPEGv anVSLSNIA gESaeglLV tK
1pea dVVFSTvvgtgtaelyRAIARRYgdGR rpPIaslttseaevakmesdvaegqvvV
2liv_dssp eEEEGGg --HHHHHHH gGGgtt-EE eE
1pea_dssp sEEEEE--thhhhhhhHHHHHHH-sS- ---Eeess--hhhhtts-hhhhtt-eeE
Similar 0111110-------001111111-011--0011----------------------01
2liv PkNYDQV PANKPIVDAIKAk kqDPSGAFVWTTYAALQSLQAGLNQ sDDPAE
1pea ApYFSSIdtPASRAFVQACHGffpenATITAWAEAAYWQTLLLGRAAQAagnWRVED
2liv_dssp ---GGGS GGGHHHHHHHTTt t--TTSSHHHHHHHHHHHHHHHHTT -S-HHH
1pea_dssp Es--TT-ssHHHHHHHHHHHTts-tt----HHHHHHHHHHHHHHHHHHHhts--HHH
Similar 1011111--1111111111110--0011111111111111111111111--011111
2liv IAKYlkanSVDTVMGPLTW deKGDLkgfefGVFDWhangtaTda
1pea VQRHlydiDIDAPQGPVRVerqNNHSr lssRIAEIdargvfQvrwqspepirpdpy
2liv_dssp HHHHhhhs-EEETTEEE-B -tTS-Bss---EEEEE-tts-eEe-
1pea_dssp HHHHhtt--EEETTEEEEE-ttTS-Ee b--EEEEE-tts-eEeeee-ss-b---ss
Similar 1111000011111111111-0011110-00111111000000100------------
2liv
1pea vvvhnldd
2liv_dssp
1pea_dssp --gggs--
Similar --------
2naca.1 AKVLCVlyddpvdgypktyarddlpkidhypggqtlptpkaidftpgqllgsv 1psda.1 ekdkIKFLLVeg 2naca.1_ds -EEEEE-b---tt-s-s--s-s------b-tts-b----s--ss-tts--sbt 1psda.1_ds --tt--EEE-s- Similar ----11111100--------------------------------------------- 2naca.1 sgeLGLRKYLESNG hTLVV TSDKDGpdsVFERELVDADVVISQpfWPAYLTPERI 1psda.1 vhQKALESLRAAGytNIEFhKGALDD eQLKESIRDAHFIGLR SRTHLTEDVI 2naca.1_ds ttgGG-HHHHHHTT -EEEE ES--SSttsHHHHHHTT-SEEEEBttB---B-HHHH 1psda.1_ds --HHHHHHHHHTT---EEE-SS---H hHHHHHHTT-SEEEE- TT--B-HHHH Similar -0011111111111-01111-111111--0111111111111111--1111111111 2naca.1 AKAKNLKLALTAGIGSDHVDLQSAIDRNVTVAEVTYcnsTTLTAQARYAAGTREILE 1psda.1 NAAEKLVAIGCFCIGTNQVDLDAAAKRGIPVFNAPF sSTQEAQENIGLEVAGKLI 2naca.1_ds HH-TT--EEEESSS--TTB-HHHHHHTT-EEEE-TTtth-SHHHHHHHHHHHHHHHH 1psda.1_ds HH-SS--EEEESSS--TTB-HHHHHTTT--EE--TT ---HHHHHHHHHHHHHHHH Similar 111111111111111111111111111111111111--0111111111111111111 2naca.1 CFFEGrPIrdeYLIvqggal 1psda.1 KYSDNgST lSAV 2naca.1_ds HHHHT----ggGEEeettee 1psda.1_ds HHHHH--- tT-S Similar 11111011--0111------
3blm keLNDLEKKy naHIGVYALdtksGKEVK fnSD
3pte adlpapddtgLQAVLHTalsqgapGAMVRVD dnGTIHQlsegvadratgraitTT
3blm_dssp --HHHHHHHh t-EEEEEEEettt--EEE esTT
3pte_dssp -------hhhHHHHHHHhhhtt-sEEEEEEE etTEEEEeeeebssttt--b--TT
Similar --------0011111110----001111111--0011111-------------0011
3blm KRFAYASTSKAINSAILLEQv pynkLNKKvhinkddivayspilekyVGK dITL
3pte DRFRVGSVTKSFSAVVLLQLvdegkldLDASvnt ylpglLPDdrITV
3blm_dssp S-EE-GGGHHHHHHHHHHTSs -gggTT-Eee--ggg--s--ttggggTTS eEEH
3pte_dssp -BEE-GGGHHHHHHHHHHHHhhtts--TTSBhhh hstt-SS-tt-BH
Similar 111111111111111111110--00001111000----------00000111-0111
3blm KALIea smtYS
3pte RQVMshrsglydytndmfaqtvpgfesvrnkvfsyqdlitlslkhgvtnapgaaySY
3blm_dssp HHHHhh hhhH-
3pte_dssp HHHHtt-s----thhhhtsshhhhhhhhtt----hhhhhhhhhts--sssttss---
Similar 111100----------------------------------------------00011
3blm DNTANNKIIKE igGI KKVKQ RLKELGDKVTNPV
3pte SNTNFVVAGMLiekltghSVaTEYQNrIFTPLNLTDTFYVhpdtvipgthangyltp
3blm_dssp -HHHHHHHHHH ht-H HHHHH HHHHTT--S----
3pte_dssp -HHHHHHHHHHhhhhhss-HhHHHHHhTTTTTT-TT-B--tt-----ssb---ee--
Similar 11111111111-----0011-11111-1111111111111-----------------
3blm rYEIelnyyspkskkDTSTPAAFGKTLNKLIANGKLSKENKKF
3pte deaggalvdsteqtvSWAqs agaVISSTQDLDTFFSALMSGQLMSAAQLAQ
3blm_dssp --TTggg---tt--tTEE-HHHHHHHHHHHTTSSS--HHHHHH
3pte_dssp sstt---ee--s---TTTgg gt--EE-HHHHHHHHHHHHTT-SS-HHHHHH
Similar --------------011100------0001111111111111111111111111111
3blm LLdlmlnnks gdtlikdgvPKDYKVADKSGQAItyaSRNDVAFvypkgqsE pI
3pte MQqwttvnstqgyglglrrrdlSCGISVYGHTGTVQ gYYTYAFA skDgkR
3blm_dssp HHhhhhh-gg gttthhhhs-TTSEEEEEEEE-Sstt-EEEEEEee-tt--S -E
3pte_dssp HT--eeeetteee-ss-eeee-TTS-EEEEEEEEET tEEEEEEE -tTssE
Similar 1100000000---00000000011111111111111--01111111-----001-01
3blm VLVIFTnkdnksDKpNDKLISETAKSVMke
3pte SVTALA ntsnNVnVLNTMARTLESAFcgk
3blm_dssp EEEEEEe-sstt----THHHHHHHHHHHtt
3pte_dssp EEEEEE sees-HhHHHHHTHHHHHHHt--
Similar 111111--0000110111111111111100-
3cox.1 gnNGNIMVGRAnhmwdatgskqatiptMGIDnwadptapIFAEIAPlpag 1doc.2 lkvfervypFGWLGLLADtpp vshelIYANh prGFALCSQ r 3cox.1_dss b-TT-EEEEEE--tts---s---ss--EEEE-tt-tts-EEEEEE----s 1doc.2_dss -eeeeeeeeEEEEEEEESs-- ssss-EEE-- tt--EEEEE e Similar -------00111111111000--------0000011110-----001111111---0 3cox.1 lEtYVSLYLAitkNPerarfqfnsgtgkvdltwaqsQNqkg idmakKVfdkin 1doc.2 sA TRSRYYV qVP lseKVedwsderfwTElkarlpse 3cox.1_dss s---EEEEEEee-----b-eeeetttteeee---ggGGhhh hhhhhHHhhhhh 1doc.2_dss eT TEEEEEE eE- tt--Ggg--hhhhhHHhhhhs-hh Similar 01-1111111--011------------------00011000-000011100000--- 3cox.1 qkegTIYrtdlfyyktwgDDFTYHpl 1doc.2 vaeklvTGPsl ekSIAPLRsfvve 3cox.1_dss hhht--B-s------ssb-SEES--b 1doc.2_dss hhtt-----ee eeEEEEEEeeeee Similar --000011100-------0011111100---
3sdha svydaaaQLTADVKKDLRDSWKVIGSDKKGNGVALMTTLFADNQETIGYFKRLGN
2lhb pivdtgsvaPLSAAEKTKIRSAWAPVYSTYETSGVDILVKFFTSTPAAQEFFPKFKG
3sdha_dssp -hhhhhhT--HHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHH-GGGGGGGGGG--
2lhb_dssp ---sss------HHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHH-GGGGGG-GGGTT
Similar --0000000111111111111111111111111111111111111111111111111
3sdha vsQGMANDKLRGHSITLMYALQNFIDQLDNPDDLVCVVEKFAVNH iTRKISAA
2lhb lttadELKKSADVRWHAERIINAVDDAVASMDDTEKMSMKLRNLSGKHakSFQVDPE
3sdha_dssp ggGGGG-HHHHHHHHHHHHHHHHHHHTTT-HHHHHHHHHHHHHHH hTTT--HH
2lhb_dssp --shhHHHT-HHHHHHHHHHHHHHHHHHHTTT-HHHHHHHHHHHHHHHhhTS---GG
Similar ---001111111111111111111111111111111111111111111-01111111
3sdha EFGKINGPIKKVlasknfGDkyANAWAKLVAVVQAa
2lhb YFKVLAAVIADT vaAG DAGFEKLMSMICIllrsa
3sdha_dssp HHGGGHHHHHHHhhhtt--HhhHHHHHHHHHHHHHh
2lhb_dssp GHHHHHHHHHHH hhTT -HHHHHHHHHHHHhhhtt
Similar 111111111111----0011--11111111111110----
4sbva ssmdvtI LSHCELSTELAVTV tiV
1tme1 gsdnaekgkvsnddasvdfvaepvklpenqtrvAffYDRAVPIGMLRPGQniestFv
4sbva_dssp -bss-eE EEEEEEEEEEEE-S s-E
1tme1_dssp -ee-gggs------ttttss---------ttbhHhhH-S-EEEEEE--SS-tts---
Similar ---------------------------0000001--11111111111111---001-
4sbva vTSELVMPF tvGTWL
1tme1 yqendlrlNCLLLTPLpsfcpdstsgpvktkapvqwrwvrsggttnfplmtkqDYAF
4sbva_dssp eEEEE-SSG gg-HHH
1tme1_dssp --eetteeSEEE--SS-ees---tt---tts--ee-sb--bsssss-sbssb--HHH
Similar -------011111111-----------------------------------001111
4sbva RGvaQNWSKYAwVAIRYTYLPSCPTTTsGAIHMGFQydmADTLpvs vnq
1tme1 LC fSPFTYYK CDLEVTVSALGTDTV ASVLRWAP tGAPAdvtdqligytpslg
4sbva_dssp HHhhTTBSEEEeEEEEEEEEE-S-TT---EEEEEEE--tTS----s hhh
1tme1_dssp HH t--EEEEE EEEEEEEEE-S-S-- EEEEEEE- tT--------sstts-ggg
Similar 11-01111111-111111111111111-11111111--01111000--------000
4sbva lSNlKGYVTGp vwEGqsglcfvnntkcpdtsraITIALDtnEVSEKRYPFktatdy
1tme1 eTR NPHMWLvgagNT qISFVVP yNSPLSVLPAaw f
4sbva_dssp hHTsSS-EEEe tt---tttttttt---s--ss--EEE--ttS-SSSSEE---hhhh
1tme1_dssp sSS S-EEEEestt-- eEEEEE- ---SSSSEESs- b
Similar 011-1111110-0011-----------------0111111-011111111100---0
4sbva ataV gvn aniGniLVpARLVTameggssktavnTGRLYASY TIRLIEPIAA
1tme1 ngwSdfgntkdfgvaP nAD FGRLWi qgntSASVRIRYkKMKVFCPRPT
4sbva_dssp hhhH tt- tttHhhH-s-EEEEeee--s-ss-eeEEEEEEEE EEEE-SB--G
1tme1_dssp -b-Sstts-s-tb--T t-S --EEEe ees--EEEEEEEeEEEEEEE---
Similar 0001---000--0001-011-111110-------000011111111-1111111111
4sbva AlN
1tme1 LfFpwp
4sbva_dssp Gg-
1tme1_dssp ------
Similar 101---
9rnt acdytcgsncysssDVSTAQAAGYKlhedgeTVGsnSYPHKYNNYEGFDf
1gmpa dvsgtvclsa lppEATDTLNLIAS dgpFPY sQDGVVFQNRESVLp
9rnt_dssp --seeetteee-hhHHHHHHHHHHHhhhtt--BTttTBSEEE--TT----
1gmpa_dssp ----eeeggg s-hHHHHHHHHHHT t---SS tTTT-B---TT--S-
Similar -------000--------00111111111111---000111-011111111111110
9rnt s vssPYYEWPILSsgdvysggSPGADRVVFN eNnQlAGVithtgasgnnFVEc
1gmpa tqsygYYHEYTVITp garTRGTRRIICGeaTqE DYYt gdhYATfsl
9rnt_dssp s s-s-EEEEE--Tts----ss---SEEEEEE tTs-eEEEeesttsstt--EE-
1gmpa_dssp ---ttS-EEEE---t t-sS-TT-EEEE-ssTt- EEEe sstTS--ee
Similar 0-0001111111110----0001111111111-0101-1110------0001110--
9rnt
1gmpa idqt
9rnt_dssp
1gmpa_dssp eett
Similar ----