Email l.a.kelley@imperial.ac.uk Description P0AFM6 Date Thu Jan 5 11:26:46 GMT 2012 Unique Job ID 30ef9878c4e902c3

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3ojaB_ 96.4 13 PDB header:protein binding Chain: B: PDB Molecule:anopheles plasmodium-responsive leucine-rich repeat protein PDBTitle: crystal structure of lrim1/apl1c complex 2 c3ghgK_ 96.3 7 PDB header:blood clotting Chain: K: PDB Molecule:fibrinogen beta chain; PDBTitle: crystal structure of human fibrinogen 3 c1deqO_ 93.6 9 PDB header: PDB COMPND: 4 c2efrB_ 93.2 13 PDB header:contractile protein Chain: B: PDB Molecule:general control protein gcn4 and tropomyosin 1 alpha chain; PDBTitle: crystal structure of the c-terminal tropomyosin fragment with n- and2 c-terminal extensions of the leucine zipper at 1.8 angstroms3 resolution 5 c1ei3E_ 92.9 10 PDB header: PDB COMPND: 6 c2d3eD_ 92.8 13 PDB header:contractile protein Chain: D: PDB Molecule:general control protein gcn4 and tropomyosin 1 PDBTitle: crystal structure of the c-terminal fragment of rabbit2 skeletal alpha-tropomyosin 7 c2fxmB_ 92.4 14 PDB header:contractile protein Chain: B: PDB Molecule:myosin heavy chain, cardiac muscle beta isoform; PDBTitle: structure of the human beta-myosin s2 fragment 8 c2b9cA_ 91.1 14 PDB header:contractile protein Chain: A: PDB Molecule:striated-muscle alpha tropomyosin; PDBTitle: structure of tropomyosin's mid-region: bending and binding2 sites for actin 9 c1deqF_ 90.6 13 PDB header: PDB COMPND: 10 c2rd0B_ 89.9 12 PDB header:transferase/oncoprotein Chain: B: PDB Molecule:phosphatidylinositol 3-kinase regulatory subunit alpha; PDBTitle: structure of a human p110alpha/p85alpha complex 11 c3o0zD_ 88.5 12 PDB header:transferase Chain: D: PDB Molecule:rho-associated protein kinase 1; PDBTitle: crystal structure of a coiled-coil domain from human rock i 12 c3na7A_ 87.9 12 PDB header:gene regulation, chaperone Chain: A: PDB Molecule:hp0958; PDBTitle: 2.2 angstrom structure of the hp0958 protein from helicobacter pylori2 ccug 17874 13 c1bf5A_ 85.4 8 PDB header:gene regulation/dna Chain: A: PDB Molecule:signal transducer and activator of transcription PDBTitle: tyrosine phosphorylated stat-1/dna complex 14 c3ojaA_ 85.4 10 PDB header:protein binding Chain: A: PDB Molecule:leucine-rich immune molecule 1; PDBTitle: crystal structure of lrim1/apl1c complex 15 c3cwgA_ 83.4 10 PDB header:transcription Chain: A: PDB Molecule:signal transducer and activator of transcription PDBTitle: unphosphorylated mouse stat3 core fragment 16 c1ciiA_ 80.5 10 PDB header:transmembrane protein Chain: A: PDB Molecule:colicin ia; PDBTitle: colicin ia 17 c2v71A_ 80.0 10 PDB header:nuclear protein Chain: A: PDB Molecule:nuclear distribution protein nude-like 1; PDBTitle: coiled-coil region of nudel 18 c1l8dB_ 79.9 10 PDB header:replication Chain: B: PDB Molecule:dna double-strand break repair rad50 atpase; PDBTitle: rad50 coiled-coil zn hook 19 c4a55B_ 79.2 13 PDB header:transferase Chain: B: PDB Molecule:phosphatidylinositol 3-kinase regulatory subunit alpha; PDBTitle: crystal structure of p110alpha in complex with ish2 of p85alpha and2 the inhibitor pik-108 20 c3dtpA_ 70.7 13 PDB header:contractile protein Chain: A: PDB Molecule:myosin 2 heavy chain chimera of smooth and PDBTitle: tarantula heavy meromyosin obtained by flexible docking to2 tarantula muscle thick filament cryo-em 3d-map 21 c3ipkA_ not modelled 69.5 16 PDB header:cell adhesion Chain: A: PDB Molecule:agi/ii; PDBTitle: crystal structure of a3vp1 of agi/ii of streptococcus mutans 22 c1y4cA_ not modelled 67.9 7 PDB header:de novo protein Chain: A: PDB Molecule:maltose binding protein fused with designed PDBTitle: designed helical protein fusion mbp 23 c3hizB_ not modelled 66.7 15 PDB header:transferase/oncoprotein Chain: B: PDB Molecule:phosphatidylinositol 3-kinase regulatory subunit PDBTitle: crystal structure of p110alpha h1047r mutant in complex with2 nish2 of p85alpha 24 d1vmaa1 not modelled 66.1 13 Fold:Four-helical up-and-down bundle Superfamily:Domain of the SRP/SRP receptor G-proteins Family:Domain of the SRP/SRP receptor G-proteins 25 c3ol1A_ not modelled 64.0 11 PDB header:structural protein Chain: A: PDB Molecule:vimentin; PDBTitle: crystal structure of vimentin (fragment 144-251) from homo sapiens,2 northeast structural genomics consortium target hr4796b 26 c3u59C_ not modelled 63.5 12 PDB header:contractile protein Chain: C: PDB Molecule:tropomyosin beta chain; PDBTitle: n-terminal 98-aa fragment of smooth muscle tropomyosin beta 27 c1c1gA_ not modelled 59.8 14 PDB header:contractile protein Chain: A: PDB Molecule:tropomyosin; PDBTitle: crystal structure of tropomyosin at 7 angstroms resolution2 in the spermine-induced crystal form 28 c3iv1F_ not modelled 57.8 11 PDB header:hydrolase Chain: F: PDB Molecule:tumor susceptibility gene 101 protein; PDBTitle: coiled-coil domain of tumor susceptibility gene 101 29 c2jeeA_ not modelled 53.2 19 PDB header:cell cycle Chain: A: PDB Molecule:yiiu; PDBTitle: xray structure of e. coli yiiu 30 c1ei3C_ not modelled 52.4 15 PDB header: PDB COMPND: 31 c2v66C_ not modelled 52.2 7 PDB header:structural protein Chain: C: PDB Molecule:nuclear distribution protein nude-like 1; PDBTitle: crystal structure of the coiled-coil domain of ndel1 (a.a.2 58 to 169)c 32 c1bg1A_ not modelled 51.7 12 PDB header:transcription/dna Chain: A: PDB Molecule:protein (transcription factor stat3b); PDBTitle: transcription factor stat3b/dna complex 33 c3hnwB_ not modelled 43.5 12 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a basic coiled-coil protein of unknown function2 from eubacterium eligens atcc 27750 34 c1deqD_ not modelled 42.5 5 PDB header: PDB COMPND: 35 c2gl2B_ not modelled 42.2 13 PDB header:cell adhesion Chain: B: PDB Molecule:adhesion a; PDBTitle: crystal structure of the tetra muntant (t66g,r67g,f68g,2 y69g) of bacterial adhesin fada 36 c2y3aB_ not modelled 42.2 12 PDB header:transferase Chain: B: PDB Molecule:phosphatidylinositol 3-kinase regulatory subunit beta; PDBTitle: crystal structure of p110beta in complex with icsh2 of p85beta and2 the drug gdc-0941 37 c2v1yB_ not modelled 37.9 13 PDB header:transferase Chain: B: PDB Molecule:phosphatidylinositol 3-kinase regulatory subunit alpha; PDBTitle: structure of a phosphoinositide 3-kinase alpha adaptor-2 binding domain (abd) in a complex with the ish2 domain3 from p85 alpha 38 c3movB_ not modelled 35.7 11 PDB header:structural protein Chain: B: PDB Molecule:lamin-b1; PDBTitle: crystal structure of human lamin-b1 coil 2 segment 39 c3kltB_ not modelled 33.8 7 PDB header:structural protein Chain: B: PDB Molecule:vimentin; PDBTitle: crystal structure of a vimentin fragment 40 c3u1aC_ not modelled 31.6 9 PDB header:contractile protein Chain: C: PDB Molecule:smooth muscle tropomyosin alpha; PDBTitle: n-terminal 81-aa fragment of smooth muscle tropomyosin alpha 41 c1yvlB_ not modelled 29.1 12 PDB header:signaling protein Chain: B: PDB Molecule:signal transducer and activator of transcription PDBTitle: structure of unphosphorylated stat1 42 c1gk4A_ not modelled 28.3 11 PDB header:vimentin Chain: A: PDB Molecule:vimentin; PDBTitle: human vimentin coil 2b fragment (cys2) 43 d1fxka_ not modelled 27.9 13 Fold:Long alpha-hairpin Superfamily:Prefoldin Family:Prefoldin 44 d2gqba1 not modelled 25.3 27 Fold:RPA2825-like Superfamily:RPA2825-like Family:RPA2825-like 45 c3a7pB_ not modelled 21.9 9 PDB header:protein transport Chain: B: PDB Molecule:autophagy protein 16; PDBTitle: the crystal structure of saccharomyces cerevisiae atg16 46 c1vmaA_ not modelled 21.7 13 PDB header:protein transport Chain: A: PDB Molecule:cell division protein ftsy; PDBTitle: crystal structure of cell division protein ftsy (tm0570) from2 thermotoga maritima at 1.60 a resolution 47 c1x8yA_ not modelled 18.7 10 PDB header:structural protein Chain: A: PDB Molecule:lamin a/c; PDBTitle: human lamin coil 2b 48 d1r05a_ not modelled 17.4 16 Fold:HLH-like Superfamily:HLH, helix-loop-helix DNA-binding domain Family:HLH, helix-loop-helix DNA-binding domain 49 d2daha1 not modelled 16.9 36 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 50 d2bwba1 not modelled 15.6 18 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 51 c1jchC_ not modelled 15.4 7 PDB header:ribosome inhibitor, hydrolase Chain: C: PDB Molecule:colicin e3; PDBTitle: crystal structure of colicin e3 in complex with its immunity protein 52 c2xdjF_ not modelled 14.3 9 PDB header:unknown function Chain: F: PDB Molecule:uncharacterized protein ybgf; PDBTitle: crystal structure of the n-terminal domain of e.coli ybgf 53 c1junB_ not modelled 13.6 17 PDB header:transcription regulation Chain: B: PDB Molecule:c-jun homodimer; PDBTitle: nmr study of c-jun homodimer 54 c2zvfG_ not modelled 13.4 13 PDB header:ligase Chain: G: PDB Molecule:alanyl-trna synthetase; PDBTitle: crystal structure of archaeoglobus fulgidus alanyl-trna2 synthetase c-terminal dimerization domain 55 c3n4xB_ not modelled 13.4 10 PDB header:replication Chain: B: PDB Molecule:monopolin complex subunit csm1; PDBTitle: structure of csm1 full-length 56 c1m1jA_ not modelled 13.4 13 PDB header:blood clotting Chain: A: PDB Molecule:fibrinogen alpha subunit; PDBTitle: crystal structure of native chicken fibrinogen with two different2 bound ligands 57 c2dnaA_ not modelled 12.7 32 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:unnamed protein product; PDBTitle: solution structure of rsgi ruh-056, a uba domain from mouse2 cdna 58 c2qa7B_ not modelled 11.7 13 PDB header:actin binding Chain: B: PDB Molecule:huntingtin-interacting protein 1; PDBTitle: crystal structure of huntingtin-interacting protein 12 (hip1) coiled-coil domain with a basic surface suitable3 for hip-protein interactor (hippi) 59 c1gk7A_ not modelled 11.6 20 PDB header:vimentin Chain: A: PDB Molecule:vimentin; PDBTitle: human vimentin coil 1a fragment (1a) 60 d2cp8a1 not modelled 11.2 50 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 61 c3qh9A_ not modelled 11.2 14 PDB header:structural protein Chain: A: PDB Molecule:liprin-beta-2; PDBTitle: human liprin-beta2 coiled-coil 62 c3he4A_ not modelled 10.9 14 PDB header:de novo protein Chain: A: PDB Molecule:synzip6; PDBTitle: heterospecific coiled-coil pair synzip5:synzip6 63 c3m9bK_ not modelled 10.4 10 PDB header:chaperone Chain: K: PDB Molecule:proteasome-associated atpase; PDBTitle: crystal structure of the amino terminal coiled coil domain and the2 inter domain of the mycobacterium tuberculosis proteasomal atpase mpa 64 c1ic2B_ not modelled 9.8 19 PDB header:contractile protein Chain: B: PDB Molecule:tropomyosin alpha chain, skeletal muscle; PDBTitle: deciphering the design of the tropomyosin molecule 65 d1z0kb1 not modelled 9.7 9 Fold:Long alpha-hairpin Superfamily:Rabenosyn-5 Rab-binding domain-like Family:Rabenosyn-5 Rab-binding domain-like 66 c1ci6A_ not modelled 9.7 12 PDB header:transcription Chain: A: PDB Molecule:transcription factor atf-4; PDBTitle: transcription factor atf4-c/ebp beta bzip heterodimer 67 c2jy5A_ not modelled 9.7 40 PDB header:signaling protein Chain: A: PDB Molecule:ubiquilin-1; PDBTitle: nmr structure of ubiquilin 1 uba domain 68 c1fosF_ not modelled 9.6 10 PDB header:transcription/dna Chain: F: PDB Molecule:c-jun proto-oncogene protein; PDBTitle: two human c-fos:c-jun:dna complexes 69 c2hpcF_ not modelled 9.3 12 PDB header:blood clotting Chain: F: PDB Molecule:fibrinogen, gamma polypeptide; PDBTitle: crystal structure of fragment d from human fibrinogen complexed with2 gly-pro-arg-pro-amide. 70 c1sjjB_ not modelled 9.2 6 PDB header:contractile protein Chain: B: PDB Molecule:actinin; PDBTitle: cryo-em structure of chicken gizzard smooth muscle alpha-2 actinin 71 c2wukD_ not modelled 9.2 18 PDB header:cell cycle Chain: D: PDB Molecule:septum site-determining protein diviva; PDBTitle: diviva n-terminal domain, f17a mutant 72 c3layF_ not modelled 9.0 11 PDB header:metal binding protein Chain: F: PDB Molecule:zinc resistance-associated protein; PDBTitle: alpha-helical barrel formed by the decamer of the zinc resistance-2 associated protein (stm4172) from salmonella enterica subsp. enterica3 serovar typhimurium str. lt2 73 d1lvfa_ not modelled 8.9 18 Fold:STAT-like Superfamily:t-snare proteins Family:t-snare proteins 74 c3p8cD_ not modelled 8.8 10 PDB header:protein binding Chain: D: PDB Molecule:wiskott-aldrich syndrome protein family member 1; PDBTitle: structure and control of the actin regulatory wave complex 75 c2kxoA_ not modelled 8.8 14 PDB header:cell cycle Chain: A: PDB Molecule:cell division topological specificity factor; PDBTitle: solution nmr structure of the cell division regulator mine protein2 from neisseria gonorrhoeae 76 c1jccC_ not modelled 8.7 13 PDB header:membrane protein Chain: C: PDB Molecule:major outer membrane lipoprotein; PDBTitle: crystal structure of a novel alanine-zipper trimer at 1.7 a2 resolution, v13a,l16a,v20a,l23a,v27a,m30a,v34a mutations 77 c1gd2G_ not modelled 8.6 15 PDB header:transcription/dna Chain: G: PDB Molecule:transcription factor pap1; PDBTitle: crystal structure of bzip transcription factor pap1 bound2 to dna 78 d2dnaa1 not modelled 8.6 30 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 79 d1fxkc_ not modelled 8.5 19 Fold:Long alpha-hairpin Superfamily:Prefoldin Family:Prefoldin 80 c3og02_ not modelled 8.4 33 PDB header:ribosome Chain: 2: PDB Molecule:50s ribosomal protein l34; PDBTitle: crystal structure of the e. coli ribosome bound to clindamycin. this2 file contains the 50s subunit of the second 70s ribosome. 81 c1t2kD_ not modelled 8.4 15 PDB header:transcription/dna Chain: D: PDB Molecule:cyclic-amp-dependent transcription factor atf-2; PDBTitle: structure of the dna binding domains of irf3, atf-2 and jun2 bound to dna 82 c1novE_ not modelled 8.3 21 PDB header:virus Chain: E: PDB Molecule:nodamura virus coat proteins; PDBTitle: nodamura virus 83 d1k8ib2 not modelled 8.1 38 Fold:MHC antigen-recognition domain Superfamily:MHC antigen-recognition domain Family:MHC antigen-recognition domain 84 c1htmB_ not modelled 8.1 13 PDB header:viral protein Chain: B: PDB Molecule:hemagglutinin ha2 chain; PDBTitle: structure of influenza haemagglutinin at the ph of membrane2 fusion 85 c3qw3B_ not modelled 8.1 17 PDB header:transferase, lyase Chain: B: PDB Molecule:orotidine-5-phosphate decarboxylase/orotate PDBTitle: structure of leishmania donovani omp decarboxylase 86 c2dahA_ not modelled 8.1 40 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:ubiquilin-3; PDBTitle: solution structure of the c-terminal uba domain in the2 human ubiquilin 3 87 d1yzma1 not modelled 8.1 8 Fold:Long alpha-hairpin Superfamily:Rabenosyn-5 Rab-binding domain-like Family:Rabenosyn-5 Rab-binding domain-like 88 c2zdiC_ not modelled 8.0 13 PDB header:chaperone Chain: C: PDB Molecule:prefoldin subunit alpha; PDBTitle: crystal structure of prefoldin from pyrococcus horikoshii2 ot3 89 c2no2A_ not modelled 7.9 14 PDB header:cell adhesion Chain: A: PDB Molecule:huntingtin-interacting protein 1; PDBTitle: crystal structure of the dllrkn-containing coiled-coil2 domain of huntingtin-interacting protein 1 90 c3cvfA_ not modelled 7.7 18 PDB header:signaling protein Chain: A: PDB Molecule:homer protein homolog 3; PDBTitle: crystal structure of the carboxy terminus of homer3 91 c3orb2_ not modelled 7.7 33 PDB header:ribosome Chain: 2: PDB Molecule:50s ribosomal protein l34; PDBTitle: crystal structure of the e. coli ribosome bound to cem-101. this file2 contains the 50s subunit of the first 70s ribosome bound to cem-101. 92 c3onjA_ not modelled 7.6 13 PDB header:protein transport Chain: A: PDB Molecule:t-snare vti1; PDBTitle: crystal structure of yeast vti1p_habc domain 93 c3g67A_ not modelled 7.6 11 PDB header:signaling protein Chain: A: PDB Molecule:methyl-accepting chemotaxis protein; PDBTitle: crystal structure of a soluble chemoreceptor from thermotoga2 maritima 94 c2cwbA_ not modelled 7.5 30 PDB header:protein binding Chain: A: PDB Molecule:chimera of immunoglobulin g binding protein g PDBTitle: solution structure of the ubiquitin-associated domain of2 human bmsc-ubp and its complex with ubiquitin 95 d1khia2 not modelled 7.5 10 Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Cold shock DNA-binding domain-like 96 c1kddC_ not modelled 7.4 19 PDB header:de novo protein Chain: C: PDB Molecule:gcn4 acid base heterodimer acid-d12la16i; PDBTitle: x-ray structure of the coiled coil gcn4 acid base2 heterodimer acid-d12la16i base-d12la16l 97 d1vcsa1 not modelled 7.4 7 Fold:STAT-like Superfamily:t-snare proteins Family:t-snare proteins 98 c1wr1B_ not modelled 7.3 30 PDB header:signaling protein Chain: B: PDB Molecule:ubiquitin-like protein dsk2; PDBTitle: the complex sturcture of dsk2p uba with ubiquitin 99 d1veja1 not modelled 7.3 30 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain