PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c2zvfG_

Fold library id	PDB Header	Molecule	Title
c2zvfG_	PDB header: ligase	Chain: G: PDB Molecule: alanyl-trna synthetase;	PDBTitle: crystal structure of archaeoglobus fulgidus alanyl-trna2 synthetase c-terminal dimerization domain

Links to external resources
Added to library: Sat Aug 28 20:42:58 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G E A A I E A V E E X E R L L R E A S S I L R V E P A K L P K T V E R F F E E W K D Q R K E I E R L K S V I A D L W A D I L X E R A E E F D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
G G G T S S S
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence S X K V V A E V V D A D X Q A L Q K L A E R L A E K G A V G C L X A K G E G K V F V V T F S G Q K Y D A R E L L R E I G R V A K G S G G G R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
T T T
S S S S S S S
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170

Sequence K D V A Q G A V Q Q L L D R E E X L D V I F R F L S E H E G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S
T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	E	A	A	I	E	A	V	E	E	X	E	R	L	L	R	E	A	S	S	I	L	R	V	E	P	A	K	L	P	K	T	V	E	R	F	F	E	E	W	K	D	Q	R	K	E	I	E	R	L	K	S	V	I	A	D	L	W	A	D	I	L	X	E	R	A	E	E	F	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																						T	T	S		G	G	G																																		T	S	S	S					T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	X	K	V	V	A	E	V	V	D	A	D	X	Q	A	L	Q	K	L	A	E	R	L	A	E	K	G	A	V	G	C	L	X	A	K	G	E	G	K	V	F	V	V	T	F	S	G	Q	K	Y	D	A	R	E	L	L	R	E	I	G	R	V	A	K	G	S	G	G	G	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T									S															T	T	T										S	S	S								S	S	S	S													T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Sequence	K	D	V	A	Q	G	A	V	Q	Q	L	L	D	R	E	E	X	L	D	V	I	F	R	F	L	S	E	H	E	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S							S																				T