Email l.a.kelley@imperial.ac.uk Description P75949 Date Thu Jan 5 12:16:19 GMT 2012 Unique Job ID 9839c715afa58994

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3sqlB_ 100.0 28 PDB header:hydrolase Chain: B: PDB Molecule:glycosyl hydrolase family 3; PDBTitle: crystal structure of glycoside hydrolase from synechococcus 2 d1tr9a_ 100.0 55 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:NagZ-like 3 c3bmxB_ 100.0 26 PDB header:hydrolase Chain: B: PDB Molecule:uncharacterized lipoprotein ybbd; PDBTitle: beta-n-hexosaminidase (ybbd) from bacillus subtilis 4 c3lk6A_ 100.0 26 PDB header:hydrolase Chain: A: PDB Molecule:lipoprotein ybbd; PDBTitle: beta-n-hexosaminidase n318d mutant (ybbd_n318d) from bacillus subtilis 5 c3tevA_ 100.0 28 PDB header:hydrolase Chain: A: PDB Molecule:glycosyl hyrolase, family 3; PDBTitle: the crystal structure of glycosyl hydrolase from deinococcus2 radiodurans r1 6 d1x38a1 100.0 20 Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:NagZ-like 7 c1ex1A_ 100.0 20 PDB header:hydrolase Chain: A: PDB Molecule:protein (beta-d-glucan exohydrolase isoenzyme exo1); PDBTitle: beta-d-glucan exohydrolase from barley 8 c3f93D_ 100.0 20 PDB header:hydrolase Chain: D: PDB Molecule:beta-glucosidase; PDBTitle: crystal structure of exo-1,3/1,4-beta-glucanase (exop) from2 pseudoalteromonas sp. bb1 9 c2x41A_ 100.0 22 PDB header:hydrolase Chain: A: PDB Molecule:beta-glucosidase; PDBTitle: structure of beta-glucosidase 3b from thermotoga neapolitana2 in complex with glucose 10 c3ac0B_ 100.0 22 PDB header:hydrolase Chain: B: PDB Molecule:beta-glucosidase i; PDBTitle: crystal structure of beta-glucosidase from kluyveromyces marxianus in2 complex with glucose 11 d1o4ua1 78.2 22 Fold:TIM beta/alpha-barrel Superfamily:Nicotinate/Quinolinate PRTase C-terminal domain-like Family:NadC C-terminal domain-like 12 c3mmrA_ 69.1 13 PDB header:hydrolase Chain: A: PDB Molecule:arginase; PDBTitle: structure of plasmodium falciparum arginase in complex with abh 13 c1o4uA_ 60.7 20 PDB header:transferase Chain: A: PDB Molecule:type ii quinolic acid phosphoribosyltransferase; PDBTitle: crystal structure of a nicotinate nucleotide pyrophosphorylase2 (tm1645) from thermotoga maritima at 2.50 a resolution 14 d1vqon1 50.2 15 Fold:Ribonuclease H-like motif Superfamily:Translational machinery components Family:Ribosomal protein L18 and S11 15 c2y69X_ 45.1 15 PDB header:electron transport Chain: X: PDB Molecule:cytochrome c oxidase polypeptide 7b; PDBTitle: bovine heart cytochrome c oxidase re-refined with molecular2 oxygen 16 d1v54k_ 45.1 15 Fold:Single transmembrane helix Superfamily:Mitochondrial cytochrome c oxidase subunit VIIb Family:Mitochondrial cytochrome c oxidase subunit VIIb 17 c3o3nA_ 36.4 12 PDB header:lyase Chain: A: PDB Molecule:alpha-subunit 2-hydroxyisocaproyl-coa dehydratase; PDBTitle: (r)-2-hydroxyisocaproyl-coa dehydratase in complex with its substrate2 (r)-2-hydroxyisocaproyl-coa 18 c4a1aM_ 29.4 21 PDB header:ribosome Chain: M: PDB Molecule:60s ribosomal protein l5; PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 5s rrna,3 5.8s rrna and proteins of molecule 3. 19 d1t9ha2 28.8 12 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:G proteins 20 d2a0ma1 28.6 17 Fold:Arginase/deacetylase Superfamily:Arginase/deacetylase Family:Arginase-like amidino hydrolases 21 c3m1rF_ not modelled 26.1 12 PDB header:hydrolase Chain: F: PDB Molecule:formimidoylglutamase; PDBTitle: the crystal structure of formimidoylglutamase from bacillus2 subtilis subsp. subtilis str. 168 22 d1nmpa_ not modelled 22.3 8 Fold:NIF3 (NGG1p interacting factor 3)-like Superfamily:NIF3 (NGG1p interacting factor 3)-like Family:NIF3 (NGG1p interacting factor 3)-like 23 c1iq8B_ not modelled 22.2 17 PDB header:transferase Chain: B: PDB Molecule:archaeosine trna-guanine transglycosylase; PDBTitle: crystal structure of archaeosine trna-guanine2 transglycosylase from pyrococcus horikoshii 24 d1eaka1 not modelled 19.5 6 Fold:PGBD-like Superfamily:PGBD-like Family:MMP N-terminal domain 25 c3bolB_ not modelled 19.3 17 PDB header:transferase Chain: B: PDB Molecule:5-methyltetrahydrofolate s-homocysteine PDBTitle: cobalamin-dependent methionine synthase (1-566) from2 thermotoga maritima complexed with zn2+ 26 d1cf2o2 not modelled 19.3 20 Fold:FwdE/GAPDH domain-like Superfamily:Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain Family:GAPDH-like 27 c3kruC_ not modelled 18.8 14 PDB header:oxidoreductase Chain: C: PDB Molecule:nadh:flavin oxidoreductase/nadh oxidase; PDBTitle: crystal structure of the thermostable old yellow enzyme from2 thermoanaerobacter pseudethanolicus e39 28 c3guzB_ not modelled 18.2 19 PDB header:ligase Chain: B: PDB Molecule:pantothenate synthetase; PDBTitle: structural and substrate-binding studies of pantothenate2 synthenate (ps)provide insights into homotropic inhibition3 by pantoate in ps's 29 d2vcha1 not modelled 18.1 10 Fold:UDP-Glycosyltransferase/glycogen phosphorylase Superfamily:UDP-Glycosyltransferase/glycogen phosphorylase Family:UDPGT-like 30 d2czca1 not modelled 18.0 20 Fold:FwdE/GAPDH domain-like Superfamily:Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain Family:GAPDH-like 31 c2eivH_ not modelled 17.1 17 PDB header:hydrolase Chain: H: PDB Molecule:arginase; PDBTitle: crystal structure of the arginase from thermus thermophilus 32 d1yira1 not modelled 17.1 28 Fold:TIM beta/alpha-barrel Superfamily:Nicotinate/Quinolinate PRTase C-terminal domain-like Family:Monomeric nicotinate phosphoribosyltransferase C-terminal domain 33 d1xi3a_ not modelled 16.8 17 Fold:TIM beta/alpha-barrel Superfamily:Thiamin phosphate synthase Family:Thiamin phosphate synthase 34 c3itcA_ not modelled 16.7 18 PDB header:hydrolase Chain: A: PDB Molecule:renal dipeptidase; PDBTitle: crystal structure of sco3058 with bound citrate and glycerol 35 c3os4A_ not modelled 16.1 28 PDB header:transferase Chain: A: PDB Molecule:nicotinate phosphoribosyltransferase; PDBTitle: the crystal structure of nicotinate phosphoribosyltransferase from2 yersinia pestis 36 d1ybea1 not modelled 16.0 31 Fold:TIM beta/alpha-barrel Superfamily:Nicotinate/Quinolinate PRTase C-terminal domain-like Family:Monomeric nicotinate phosphoribosyltransferase C-terminal domain 37 c2htmB_ not modelled 15.4 18 PDB header:biosynthetic protein Chain: B: PDB Molecule:thiazole biosynthesis protein thig; PDBTitle: crystal structure of ttha0676 from thermus thermophilus hb8 38 c3ihjA_ not modelled 14.7 14 PDB header:transferase Chain: A: PDB Molecule:alanine aminotransferase 2; PDBTitle: human alanine aminotransferase 2 in complex with plp 39 d1pv8a_ not modelled 14.5 18 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase) 40 c2nydB_ not modelled 14.0 11 PDB header:unknown function Chain: B: PDB Molecule:upf0135 protein sa1388; PDBTitle: crystal structure of staphylococcus aureus hypothetical protein sa1388 41 c1t9hA_ not modelled 13.2 12 PDB header:hydrolase Chain: A: PDB Molecule:probable gtpase engc; PDBTitle: the crystal structure of yloq, a circularly permuted gtpase. 42 d1l5oa_ not modelled 12.7 19 Fold:Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) Superfamily:Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) Family:Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) 43 d1vlpa2 not modelled 12.6 16 Fold:TIM beta/alpha-barrel Superfamily:Nicotinate/Quinolinate PRTase C-terminal domain-like Family:Monomeric nicotinate phosphoribosyltransferase C-terminal domain 44 d1vhna_ not modelled 12.3 19 Fold:TIM beta/alpha-barrel Superfamily:FMN-linked oxidoreductases Family:FMN-linked oxidoreductases 45 d1ihoa_ not modelled 12.2 17 Fold:Adenine nucleotide alpha hydrolase-like Superfamily:Nucleotidylyl transferase Family:Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) 46 c1ybeA_ not modelled 11.9 31 PDB header:transferase Chain: A: PDB Molecule:nicotinate phosphoribosyltransferase; PDBTitle: crystal structure of a nicotinate phosphoribosyltransferase 47 c2x4bA_ not modelled 11.9 14 PDB header:hydrolase Chain: A: PDB Molecule:limit dextrinase; PDBTitle: barley limit dextrinase in complex with beta-cyclodextrin 48 c2l1nA_ not modelled 11.4 54 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution nmr structure of the protein yp_399305.1 49 c2im5C_ not modelled 11.1 31 PDB header:transferase Chain: C: PDB Molecule:nicotinate phosphoribosyltransferase; PDBTitle: crystal structure of nicotinate phosphoribosyltransferase2 from porphyromonas gingivalis 50 c3izcQ_ not modelled 10.9 25 PDB header:ribosome Chain: Q: PDB Molecule:60s ribosomal protein rpl5 (l18p); PDBTitle: localization of the large subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome 51 c1y80A_ not modelled 10.8 12 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:predicted cobalamin binding protein; PDBTitle: structure of a corrinoid (factor iiim)-binding protein from2 moorella thermoacetica 52 d2g2ca1 not modelled 10.2 13 Fold:Molybdenum cofactor biosynthesis proteins Superfamily:Molybdenum cofactor biosynthesis proteins Family:MogA-like 53 d2p12a1 not modelled 10.1 6 Fold:FomD barrel-like Superfamily:FomD-like Family:FomD-like 54 c2qgqF_ not modelled 10.0 10 PDB header:structural genomics, unknown function Chain: F: PDB Molecule:protein tm_1862; PDBTitle: crystal structure of tm_1862 from thermotoga maritima.2 northeast structural genomics consortium target vr77 55 d2bz1a1 not modelled 9.9 17 Fold:RibA-like Superfamily:RibA-like Family:RibA-like 56 d1tifa_ not modelled 9.7 19 Fold:beta-Grasp (ubiquitin-like) Superfamily:Translation initiation factor IF3, N-terminal domain Family:Translation initiation factor IF3, N-terminal domain 57 c2yybA_ not modelled 9.6 11 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein ttha1606; PDBTitle: crystal structure of ttha1606 from thermus thermophilus hb8 58 d1fj2a_ not modelled 9.5 16 Fold:alpha/beta-Hydrolases Superfamily:alpha/beta-Hydrolases Family:Carboxylesterase/thioesterase 1 59 d2gx8a1 not modelled 9.4 10 Fold:NIF3 (NGG1p interacting factor 3)-like Superfamily:NIF3 (NGG1p interacting factor 3)-like Family:NIF3 (NGG1p interacting factor 3)-like 60 d1itua_ not modelled 9.3 14 Fold:TIM beta/alpha-barrel Superfamily:Metallo-dependent hydrolases Family:Renal dipeptidase 61 d2gycm1 not modelled 8.7 14 Fold:Ribonuclease H-like motif Superfamily:Translational machinery components Family:Ribosomal protein L18 and S11 62 d2c1ha1 not modelled 8.5 17 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase) 63 c3gmiA_ not modelled 8.4 18 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0348 protein mj0951; PDBTitle: crystal structure of a protein of unknown function from2 methanocaldococcus jannaschii 64 c2h90A_ not modelled 8.4 12 PDB header:oxidoreductase Chain: A: PDB Molecule:xenobiotic reductase a; PDBTitle: xenobiotic reductase a in complex with coumarin 65 c3qfeB_ not modelled 8.3 14 PDB header:lyase Chain: B: PDB Molecule:putative dihydrodipicolinate synthase family protein; PDBTitle: crystal structures of a putative dihydrodipicolinate synthase family2 protein from coccidioides immitis 66 d2c1xa1 not modelled 8.3 19 Fold:UDP-Glycosyltransferase/glycogen phosphorylase Superfamily:UDP-Glycosyltransferase/glycogen phosphorylase Family:UDPGT-like 67 d1lj8a3 not modelled 8.2 26 Fold:6-phosphogluconate dehydrogenase C-terminal domain-like Superfamily:6-phosphogluconate dehydrogenase C-terminal domain-like Family:Mannitol 2-dehydrogenase 68 c3innB_ not modelled 8.0 20 PDB header:ligase Chain: B: PDB Molecule:pantothenate synthetase; PDBTitle: crystal structure of pantoate-beta-alanine-ligase in complex2 with atp at low occupancy at 2.1 a resolution 69 c3qy6A_ not modelled 8.0 11 PDB header:hydrolase Chain: A: PDB Molecule:tyrosine-protein phosphatase ywqe; PDBTitle: crystal structures of ywqe from bacillus subtilis and cpsb from2 streptococcus pneumoniae, unique metal-dependent tyrosine3 phosphatases 70 c2gx8B_ not modelled 7.9 10 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:nif3-related protein; PDBTitle: the crystal stucture of bacillus cereus protein related to nif3 71 d3gcba_ not modelled 7.6 11 Fold:Cysteine proteinases Superfamily:Cysteine proteinases Family:Papain-like 72 d1r5ya_ not modelled 7.5 18 Fold:TIM beta/alpha-barrel Superfamily:tRNA-guanine transglycosylase Family:tRNA-guanine transglycosylase 73 d1hfel1 not modelled 7.5 21 Fold:Fe-only hydrogenase Superfamily:Fe-only hydrogenase Family:Fe-only hydrogenase 74 c3u5eL_ not modelled 7.5 13 PDB header:ribosome Chain: L: PDB Molecule:60s ribosomal protein l13-a; PDBTitle: the structure of the eukaryotic ribosome at 3.0 resolution 75 c1ps9A_ not modelled 7.3 12 PDB header:oxidoreductase Chain: A: PDB Molecule:2,4-dienoyl-coa reductase; PDBTitle: the crystal structure and reaction mechanism of e. coli 2,4-2 dienoyl coa reductase 76 d1iq8a1 not modelled 7.3 17 Fold:TIM beta/alpha-barrel Superfamily:tRNA-guanine transglycosylase Family:tRNA-guanine transglycosylase 77 d1d3va_ not modelled 7.3 13 Fold:Arginase/deacetylase Superfamily:Arginase/deacetylase Family:Arginase-like amidino hydrolases 78 c4a18U_ not modelled 7.2 22 PDB header:ribosome Chain: U: PDB Molecule:rpl13; PDBTitle: t.thermophila 60s ribosomal subunit in complex with initiation2 factor 6. this file contains 26s rrna and proteins of molecule 1 79 d2p10a1 not modelled 7.1 18 Fold:TIM beta/alpha-barrel Superfamily:Phosphoenolpyruvate/pyruvate domain Family:Mll9387-like 80 c3obkH_ not modelled 6.6 20 PDB header:lyase Chain: H: PDB Molecule:delta-aminolevulinic acid dehydratase; PDBTitle: crystal structure of delta-aminolevulinic acid dehydratase2 (porphobilinogen synthase) from toxoplasma gondii me49 in complex3 with the reaction product porphobilinogen 81 d1ps9a1 not modelled 6.6 12 Fold:TIM beta/alpha-barrel Superfamily:FMN-linked oxidoreductases Family:FMN-linked oxidoreductases 82 d1i5ga_ not modelled 6.5 15 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 83 c2p10D_ not modelled 6.2 18 PDB header:hydrolase Chain: D: PDB Molecule:mll9387 protein; PDBTitle: crystal structure of a putative phosphonopyruvate hydrolase (mll9387)2 from mesorhizobium loti maff303099 at 2.15 a resolution 84 d1o66a_ not modelled 6.1 19 Fold:TIM beta/alpha-barrel Superfamily:Phosphoenolpyruvate/pyruvate domain Family:Ketopantoate hydroxymethyltransferase PanB 85 c3g0tA_ not modelled 5.9 10 PDB header:transferase Chain: A: PDB Molecule:putative aminotransferase; PDBTitle: crystal structure of putative aspartate aminotransferase (np_905498.1)2 from porphyromonas gingivalis w83 at 1.75 a resolution 86 c2wskA_ not modelled 5.8 20 PDB header:hydrolase Chain: A: PDB Molecule:glycogen debranching enzyme; PDBTitle: crystal structure of glycogen debranching enzyme glgx from2 escherichia coli k-12 87 d1zt2a1 not modelled 5.7 17 Fold:Prim-pol domain Superfamily:Prim-pol domain Family:PriA-like 88 d2aeba1 not modelled 5.7 13 Fold:Arginase/deacetylase Superfamily:Arginase/deacetylase Family:Arginase-like amidino hydrolases 89 c2waqG_ not modelled 5.6 57 PDB header:transcription Chain: G: PDB Molecule:dna-directed rna polymerase rpo8 subunit; PDBTitle: the complete structure of the archaeal 13-subunit dna-2 directed rna polymerase 90 c3s9xA_ not modelled 5.4 26 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:asch domain; PDBTitle: high resolution crystal structure of asch domain from lactobacillus2 crispatus jv v101 91 d1mkya3 not modelled 5.4 13 Fold:Alpha-lytic protease prodomain-like Superfamily:Probable GTPase Der, C-terminal domain Family:Probable GTPase Der, C-terminal domain 92 d1a3xa2 not modelled 5.4 14 Fold:TIM beta/alpha-barrel Superfamily:Phosphoenolpyruvate/pyruvate domain Family:Pyruvate kinase 93 d1tqyb1 not modelled 5.3 8 Fold:Thiolase-like Superfamily:Thiolase-like Family:Thiolase-related 94 c1m7xC_ not modelled 5.3 19 PDB header:transferase Chain: C: PDB Molecule:1,4-alpha-glucan branching enzyme; PDBTitle: the x-ray crystallographic structure of branching enzyme 95 d1x2ga2 not modelled 5.3 7 Fold:Class II aaRS and biotin synthetases Superfamily:Class II aaRS and biotin synthetases Family:LplA-like 96 d1v33a_ not modelled 5.2 33 Fold:Prim-pol domain Superfamily:Prim-pol domain Family:PriA-like 97 c2pc4B_ not modelled 5.1 19 PDB header:lyase Chain: B: PDB Molecule:fructose-bisphosphate aldolase; PDBTitle: crystal structure of fructose-bisphosphate aldolase from plasmodium2 falciparum in complex with trap-tail determined at 2.4 angstrom3 resolution 98 d3tata_ not modelled 5.1 13 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:AAT-like 99 d1bj4a_ not modelled 5.1 12 Fold:PLP-dependent transferase-like Superfamily:PLP-dependent transferases Family:GABA-aminotransferase-like